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SaveShare Save Share Save Share Save A comprehensive proteogenomic pipeline for neoantigen discovery to advance personalized cancer immunotherapy
Huber, Florian; Arnaud, Marion; Stevenson, Brian J.; Michaux, Justine; Benedetti, Fabrizio; Thevenet, Jonathan; Bobisse, Sara; Chiffelle, Johanna; Gehert, Talita; Mueller, Markus; Pak, HuiSong; Kramer, Anne I.; Altimiras, Emma Ricart; Racle, Julien; Taillandier-Coindard, Marie; Muehlethaler, Katja; Auger, Aymeric; Saugy, Damien; Murgues, Baptiste; Benyagoub, Abdelkader; Gfeller, David; Laniti, Denarda Dangaj; Kandalaft, Lana; Rodrigo, Blanca Navarro; Bouchaab, Hasna; Tissot, Stephanie; Coukos, George; Harari, Alexandre; Bassani-Sternberg, Michal Share Save Share Save Joint host-pathogen genomic analysis identifies hepatitis B virus mutations associated with human NTCP and HLA class I variationXu, Zhi Ming; Gnouamozi, Gnimah Eva; Rueger, Sina; Shea, Patrick R.; Buti, Maria; Chan, Henry LY.; Marcellin, Patrick; Lawless, Dylan; Naret, Olivier; Zeller, Matthias; Schneuing, Arne; Scheck, Andreas; Junier, Thomas; Moradpour, Darius; Podlaha, Ondrej; Suri, Vithika; Gaggar, Anuj; Subramanian, Mani; Correia, Bruno; Gfeller, David; Urban, Stephan; Fellay, Jacques Share Save Share Save Share Save Share Save A phase 1 trial of adoptive transfer of vaccine-primed autologous circulating T cells in ovarian cancerBobisse, Sara; Bianchi, Valentina; Tanyi, Janos; Sarivalasis, Apostolos; Missiaglia, Edoardo; Petremand, Remy; Benedetti, Fabrizio; Torigian, Drew; Genolet, Raphael; Barras, David; Michel, Alexandra; Mastroyannis, Spyridon; Zsiros, Emese; Dangaj Laniti, Denarda; Tsourti, Zoi; Stevenson, Brian; Iseli, Christian; Levine, Bruce; Speiser, Daniel; Gfeller, David; Bassani-Sternberg, Michal; Powell, Daniel; June, Carl; Dafni, Urania; Kandalaft, Lana; Harari, Alexandre; Coukos, George Share Save Neoantigen-specific CD8 T cells with high structural avidity preferentially reside in and eliminate tumorsSchmidt, Julien; Chiffelle, Johanna; Perez, Marta A. S.; Magnin, Morgane; Bobisse, Sara; Arnaud, Marion; Genolet, Raphael; Cesbron, Julien; Barras, David; Navarro Rodrigo, Blanca; Benedetti, Fabrizio; Michel, Alexandra; Queiroz, Lise; Baumgaertner, Petra; Guillaume, Philippe; Hebeisen, Michael; Michielin, Olivier; Nguyen-Ngoc, Tu; Huber, Florian; Irving, Melita; Tissot-Renaud, Stephanie; Stevenson, Brian J.; Rusakiewicz, Sylvie; Dangaj Laniti, Denarda; Bassani-Sternberg, Michal; Rufer, Nathalie; Gfeller, David; Kandalaft, Lana E.; Speiser, Daniel E.; Zoete, Vincent; Coukos, George; Harari, Alexandre Share Save Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopesRacle, Julien; Guillaume, Philippe; Schmidt, Julien; Michaux, Justine; Larabi, Amede; Lau, Kelvin; Perez, Marta A. S.; Croce, Giancarlo; Genolet, Raphael; Coukos, George; Zoete, Vincent; Pojer, Florence; Bassani-Sternberg, Michal; Harari, Alexandre; Gfeller, David Share Save Share Save Improved predictions of antigen presentation and TCR recognition with MixMHCpred2.2 and PRIME2.0 reveal potent SARS-CoV-2 CD8+ T-cell epitopesGfeller, David; Schmidt, Julien; Croce, Giancarlo; Guillaume, Philippe; Bobisse, Sara; Genolet, Raphael; Queiroz, Lise; Cesbron, Julien; Racle, Julien; Harari, Alexandre Share Save Share Save Sensitive identification of neoantigens and cognate TCRs in human solid tumorsArnaud, Marion; Chiffelle, Johanna; Genolet, Raphael; Rodrigo, Blanca Navarro; Perez, Marta A. S.; Huber, Florian; Magnin, Morgane; Nguyen-Ngoc, Tu; Guillaume, Philippe; Baumgaertner, Petra; Chong, Chloe; Stevenson, Brian J.; Gfeller, David; Irving, Melita; Speiser, Daniel E.; Schmidt, Julien; Zoete, Vincent; Kandalaft, Lana E.; Bassani-Sternberg, Michal; Bobisse, Sara; Coukos, George; Harari, Alexandre Share Save Tumor-specific cytolytic CD4 T cells mediate immunity against human cancerCachot, Amelie; Bilous, Mariia; Liu, Yen-Cheng; Li, Xiaokang; Saillard, Margaux; Cenerenti, Mara; Rockinger, Georg Alexander; Wyss, Tania; Guillaume, Philippe; Schmidt, Julien; Genolet, Raphael; Ercolano, Giuseppe; Protti, Maria Pia; Reith, Walter; Ioannidou, Kalliopi; de Leval, Laurence; Trapani, Joseph A.; Coukos, George; Harari, Alexandre; Speiser, Daniel E.; Mathis, Alexander; Gfeller, David; Altug, Hatice; Romero, Pedro; Jandus, Camilla Share Save Nongenetic Evolution Drives Lung Adenocarcinoma Spatial Heterogeneity and ProgressionTavernari, Daniele; Battistello, Elena; Dheilly, Elie; Petruzzella, Aaron S.; Mina, Marco; Sordet-Dessimoz, Jessica; Peters, Solange; Krueger, Thorsten; Gfeller, David; Riggi, Nicolo; Oricchio, Elisa; Letovanec, Igor; Ciriello, Giovanni Share Save Inflammatory B cells correlate with failure to checkpoint blockade in melanoma patientsde Jonge, Kaat; Tille, Laure; Lourenco, Joao; Maby-El Hajjami, Helene; Nassiri, Sina; Racle, Julien; Gfeller, David; Delorenzi, Mauro; Verdeil, Gregory; Baumgaertner, Petra; Speiser, Daniel E. Share Save 
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