Caleb Hallinan - Publications, H-index & Citations

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Caleb Hallinan

johns hopkins university

3H-index

17Paper Count

33Citation Count

Published Papers 7

Publication Date

Impact of data quality on deep learning prediction of spatial transcriptomics from histology images

Genome Biology

IF9.4

2026-08-11

OAAI

Caleb Hallinan; Calixto-Hope G. Lucas; Jean Fan

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Evidence of off-target probe binding affecting 10x Genomics Xenium gene panels compromise accuracy of spatial transcriptomic profiling

eLife

IF0

2026-05-01

PREAI

Hallinan, Caleb; Ji, Hyun Joo; Tsou, Edmund; Salzberg, Steven L.; Fan, Jean

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Spatial mutual nearest neighbors for spatial transcriptomics data

BIOINFORMATICS

IF5.4

2025-08-01

OAAI

Zhou, Haowen; Panwar, Pratibha; Guo, Boyi; Hallinan, Caleb; Ghazanfar, Shila; Hicks, Stephanie C.

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Heterogeneity-preserving discriminative feature selection for disease-specific subtype discovery

NATURE COMMUNICATIONS

IF15.7

2025-04-16

OAAI

Basher, Abdur Rahman M. A.; Hallinan, Caleb; Lee, Kwonmoo

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Crosstalk with postmenopausal obese mammary adipocytes impacts breast cancer cell metabolism and promotes tumorigenesis

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Roy, Roopali; Aldakhlallah, Rama; Cobbs, Stephen; Man, Emily; Hallinan, Caleb; Lee, Kwonmoo; Lotz-Bousvaros, Margaret; Pories, Susan; Moses, Marsha A.

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Screening adequacy of unstained thyroid fine needle aspiration samples using a deep learning-based classifier (vol 13, 13525, 2023)

SCIENTIFIC REPORTS

IF3.9

2023-09-12

OAAI

Jang, Junbong; Kim, Young H.; Westgate, Brian; Zong, Yang; Hallinan, Caleb; Akalin, Ali; Lee, Kwonmoo

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Screening adequacy of unstained thyroid fine needle aspiration samples using a deep learning-based classifier

SCIENTIFIC REPORTS

IF3.9

2023-08-19

OAAI

Jang, Junbong; Kim, Young; Westgate, Brian; Zong, Yang; Hallinan, Caleb; Akalin, Ali; Lee, Kwonmoo

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Research Directions