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Ben F. Koop

princeton university

73H-index
368Paper Count
2.0WCitation Count
Published Papers 96
Publication Date
Grizzly bear population genomics across a coastal-interior ecotone in British Columbia, Canada
err2025-10-01
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errHenson, Lauren H.; Christensen, Kris A.; Sutherland, Ben J. G.; Johnson, Hollie A.; vonHoldt, Bridgett; Stronen, Astrid Vik; Paquet, Paul C.; Moody, Jason; Koop, Ben F.; Darimont, Chris T.
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Generation of field-reversed configurations via neutral beam injection
err2025-04-12
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errRoche, T.; Dettrick, S.; Fontanilla, A.; Gupta, S.; Onofri, M.; Romero, J. A.; Steinhauer, L. C.; Tobin, M. T.; Granstedt, E. M.; Galeotti, L.; Karbashewski, S.; Magee, R. M.; Yushmanov, P.; Trask, E.; Gota, H.; Abramov, S.; Allfrey, I.; Andow, R.; Arceo, V.; Aviles, J.; Barnes, D. C.; Beall, M.; Bolte, N. G.; Bui, D.; Ceccherini, F.; Clary, R.; DeHaas, T.; Denlinger, B.; Van Drie, A.; Feng, P.; Gupta, D. K.; Hubbard, K.; Kinley, J. S.; Knapp, K.; Koop, B.; Korepanov, S. A.; Korepanov, A.; Lau, C. K.; Lieurance, D.; MacDonald, D.; Madura, D.; Margarit, J. A.; Margo, J.; Marsden Sr, P.; Matsumoto, T.; Meekins, M. P.; Mendoza, R.; Michel, R.; Monkhorst, H.; Morehouse, M. E.; Nations, M.; Necas, A.; Nicks, B. S.; Page, R.; Parke, E.; Paulson, J.; Phung, K.; Rogers, T. W.; Schmitz, L.; Schroeder, J. H.; Settles, G. N.; Sibley, A. G. H.; Signorelli, M.; Smith, R. J.; Snitchler, G. L.; Sokolov, V.; Song, Y.; Strashnoy, G.; Tagney, L.; Titus, J. B.; Ufnal, J.; Valentine, T.; Weixel, C. E.; Weixel, S.; White, C.; Wollenberg, M.; Zhai, K.; Ziaei, S.; Tuszewski, M.; Smirnov, A.; Putvinski, S.; Tajima, T.; Binderbauer, M. W.
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Allele surfing causes maladaptation in a Pacific salmon of conservation concern
err2023-09-08
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errRougemont, Quentin; Leroy, Thibault; Rondeau, Eric B.; Koop, Ben; Bernatchez, Louis
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ARS2 is a conserved eukaryotic gene essential for early mammalian development
err2023-03-27
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errWilson, Michael D.; Wang, Diana; Wagner, Rebecca; Breyssens, Hilde; Gertsenstein, Marina; Lobe, Corrinne; Lu, Xin; Nagy, Andras; Burke, Robert D.; Koop, Ben F.; Howard, Perry L.
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Re-evaluating Coho salmon (Oncorhynchus kisutch) conservation units in Canada using genomic data
err2022-10-18
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errXuereb, Amanda; Rougemont, Quentin; Dallaire, Xavier; Moore, Jean-Sebastien; Normandeau, Eric; Bougas, Berenice; Perreault-Payette, Alysse; Koop, Ben F.; Withler, Ruth; Beacham, Terry; Bernatchez, Louis
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The salmon louse genome: Copepod features and parasitic adaptations
err2021-11-01
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errSkern-Mauritzen, Rasmus; Malde, Ketil; Eichner, Christiane; Dondrup, Michael; Furmanek, Tomasz; Besnier, Francois; Komisarczuk, Anna Zofia; Nuhn, Michael; Dalvin, Sussie; Edvardsen, Rolf B.; Klages, Sven; Huettel, Bruno; Stueber, Kurt; Grotmol, Sindre; Karlsbakk, Egil; Kersey, Paul; Leong, Jong S.; Glover, Kevin A.; Reinhardt, Richard; Lien, Sigbjorn; Jonassen, Inge; Koop, Ben F.; Nilsen, Frank
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Detection of selection signatures in farmed coho salmon (Oncorhynchus kisutch) using dense genome-wide information
err2021-05-06
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errLopez, M. E.; Cadiz, M., I; Rondeau, E. B.; Koop, B. F.; Yanez, J. M.
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Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication
err2021-04-13
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errGillard, Gareth B.; Gronvold, Lars; Rosaeg, Line L.; Holen, Matilde Mengkrog; Monsen, Oystein; Koop, Ben F.; Rondeau, Eric B.; Gundappa, Manu Kumar; Mendoza, John; Macqueen, Daniel J.; Rohlfs, Rori, V; Sandve, Simen R.; Hvidsten, Torgeir R.
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Genomic evidence of past and future climate-linked loss in a migratory Arctic fish (vol 11, pg 158, 2021)
err2021-03-17
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errLayton, K. K. S.; Snelgrove, P. V. R.; Dempson, J. B.; Kess, T.; Lehnert, S. J.; Bentzen, P.; Duffy, S. J.; Messmer, A. M.; Stanley, R. R. E.; DiBacco, C.; Salisbury, S. J.; Ruzzante, D. E.; Nugent, C. M.; Ferguson, M. M.; Leong, J. S.; Koop, B. F.; Bradbury, I. R.
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Demographic history shaped geographical patterns of deleterious mutation load in a broadly distributed Pacific Salmon (vol 16, e1008348, 2020)
err2021-02-18
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errRougemont, Quentin; Moore, Jean-Sebastien; Leroy, Thibault; Normandeau, Eric; Rondeau, Eric B.; Withler, Ruth E.; Van Doornik, Donald M.; Crane, Penelope A.; Naish, Kerry A.; Garza, John Carlos; Beacham, Terry D.; Koop, Ben F.; Bernatchez, Louis
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The rise and fall of the ancient northern pike master sex-determining gene
err2021-01-28
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errPan, Qiaowei; Feron, Romain; Jouanno, Elodie; Darras, Hugo; Herpin, Amaury; Koop, Ben; Rondeau, Eric; Goetz, Frederick W.; Larson, Wesley A.; Bernatchez, Louis; Tringali, Mike; Curran, Stephen S.; Saillant, Eric; Denys, Gael P. J.; von Hippel, Frank A.; Chen, Songlin; Lopez, J. Andres; Verreycken, Hugo; Ocalewicz, Konrad; Guyomard, Rene; Eche, Camille; Lluch, Jerome; Roques, Celine; Hu, Hongxia; Tabor, Roger; DeHaan, Patrick; Nichols, Krista M.; Journot, Laurent; Parrinello, Hugues; Klopp, Christophe; Interesova, Elena A.; Trifonov, Vladimir; Schartl, Manfred; Postlethwait, John; Guiguen, Yann
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Genomic evidence of past and future climate-linked loss in a migratory Arctic fish
err2021-01-11
err51
PREAI
errLayton, K. K. S.; Snelgrove, P. V. R.; Dempson, J. B.; Kess, T.; Lehnert, S. J.; Bentzen, P.; Duffy, S. J.; Messmer, A. M.; Stanley, R. R. E.; DiBacco, C.; Salisbury, S. J.; Ruzzante, D. E.; Nugent, C. M.; Ferguson, M. M.; Leong, J. S.; Koop, B. F.; Bradbury, I. R.
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Convergent geographic patterns between grizzly bear population genetic structure and Indigenous language groups in coastal British Columbia, Canada
err2021-01-01
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errHenson, Lauren H.; Balkenhol, Niko; Gustas, Robert; Adams, Megan; Walkus, Jennifer; Housty, William G.; Stronen, Astrid, V; Moody, Jason; Service, Christina; Reece, Donald; VonHoldt, Bridgett M.; McKechnie, Iain; Koop, Ben F.; Darimont, Chris T.
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Demographic history shaped geographical patterns of deleterious mutation load in a broadly distributed Pacific Salmon
err2020-08-26
err36
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errRougemont, Quentin; Moore, Jean-Sebastien; Leroy, Thibault; Normandeau, Eric; Rondeau, Eric B.; Withler, Ruth E.; Van Doornik, Donald M.; Crane, Penelope A.; Naish, Kerry A.; Garza, John Carlos; Beacham, Terry D.; Koop, Ben F.; Bernatchez, Louis
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Parallelism in eco-morphology and gene expression despite variable evolutionary and genomic backgrounds in a Holarctic fish
err2020-04-17
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errJacobs, Arne; Carruthers, Madeleine; Yurchenko, Andrey; Gordeeva, Natalia V.; Alekseyev, Sergey S.; Hooker, Oliver; Leong, Jong S.; Minkley, David R.; Rondeau, Eric B.; Koop, Ben F.; Adams, Colin E.; Elmer, Kathryn R.
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Resolving fine-scale population structure and fishery exploitation using sequenced microsatellites in a northern fish
err2020-02-20
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errLayton, Kara K. S.; Dempson, Brian; Snelgrove, Paul V. R.; Duffy, Steven J.; Messmer, Amber M.; Paterson, Ian G.; Jeffery, Nicholas W.; Kess, Tony; Horne, John B.; Salisbury, Sarah J.; Ruzzante, Daniel E.; Bentzen, Paul; Cote, David; Nugent, Cameron M.; Ferguson, Moira M.; Leong, Jong S.; Koop, Ben F.; Bradbury, Ian R.
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Sex-dependent dominance maintains migration supergene in rainbow trout (vol 3, pg 1731, 2019)
err2019-12-09
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errPearse, Devon E.; Barson, Nicola J.; Nome, Torfinn; Gao, Guangtu; Campbell, Matthew A.; Abadia-Cardoso, Alicia; Anderson, Eric C.; Rundio, David E.; Williams, Thomas H.; Naish, Kerry A.; Moen, Thomas; Liu, Sixin; Kent, Matthew; Moser, Michel; Minkley, David R.; Rondeau, Eric B.; Brieuc, Marine S. O.; Sandve, Simen Rod; Miller, Michael R.; Cedillo, Lucydalila; Baruch, Kobi; Hernandez, Alvaro G.; Ben-Zvi, Gil; Shem-Tov, Doron; Barad, Omer; Kuzishchin, Kirill; Garza, John Carlos; Lindley, Steven T.; Koop, Ben F.; Thorgaard, Gary H.; Palti, Yniv; Lien, Sigbjorn
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Sex-dependent dominance maintains migration supergene in rainbow trout
err2019-11-25
err189
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errPearse, Devon E.; Barson, Nicola J.; Nome, Torfinn; Gao, Guangtu; Campbell, Matthew A.; Abadia-Cardoso, Alicia; Anderson, Eric C.; Rundio, David E.; Williams, Thomas H.; Naish, Kerry A.; Moen, Thomas; Liu, Sixin; Kent, Matthew; Moser, Michel; Minkley, David R.; Rondeau, Eric B.; Brieuc, Marine S. O.; Rod Sandve, Simen; Miller, Michael R.; Cedillo, Lucydalila; Baruch, Kobi; Hernandez, Alvaro G.; Ben-Zvi, Gil; Shem-Tov, Doron; Barad, Omer; Kuzishchin, Kirill; Garza, John Carlos; Lindley, Steven T.; Koop, Ben F.; Thorgaard, Gary H.; Palti, Yniv; Lien, Sigbjorn
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Standardized IMGT® Nomenclature of Salmonidae IGH Genes, the Paradigm of Atlantic Salmon and Rainbow Trout: From Genomics to Repertoires
err2019-11-12
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errMagadan, Susana; Krasnov, Aleksei; Hadi-Saljoqi, Saida; Afanasyev, Sergey; Mondot, Stanislas; Lallias, Delphine; Castro, Rosario; Salinas, Irene; Sunyer, Oriol; Hansen, John; Koop, Ben F.; Lefranc, Marie-Paule; Boudinot, Pierre
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Carotenoid pigmentation in salmon: variation in expression at BCO2-l locus controls a key fitness trait affecting red coloration
err2019-10-16
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errLehnert, S. J.; Christensen, K. A.; Vandersteen, W. E.; Sakhrani, D.; Pitcher, T. E.; Heath, J. W.; Koop, B. F.; Heath, D. D.; Devlin, R. H.
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