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M

Miia Mäkelä

aalto university

41H-index
405Paper Count
6.4KCitation Count
Published Papers 63
Publication Date
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Catcher Domains as Multifunctional Fusion Modules for Soluble Expression, Covalent Coupling, and Spatial Organization of Recombinant Proteins
errSmall Science
IF8.3
err2026-07-29
err0
errOAAI
errRuxia Fan; Xing Wan; Safoorah Khanum; Juhani P. Jokio; Nea B. Möttönen; Miia R. Mäkelä; A. Sesilja Aranko
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The Zn(II)2Cys6 transcription factor DsAce3 is a major activator of cellulases in the white-rot fungus Dichomitus squalens
errApplied and Environmental Microbiology
IF3.7
err2026-02-01
err0
PREAI
errGonzalez Ramos, Victor M.; Kowalczyk, Joanna E.; Maina, Henry N.; Talag, Jayson; Ahrendt, Steven; Lipzen, Anna; Guo, Jie; Clum, Alicia; Labutti, Kurt; Hundley, Hope; Barry, Kerrie; Grigoriev, Igor V.; Makela, Miia R.
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Metabolic engineering reveals the relative importance of different sugar catabolic pathways during consumption of plant biomass by Aspergillus niger
errCurrent Research in Microbial Sciences
IF5.8
err2025-08-05
err0
errOAAI
errTania Chroumpi; Astrid Müller; Mao Peng; Mar Cubertorer Navarro; Robin Kuijpers; Agata Terebieniec; Jiajia Li; Lye Meng Markillie; Hugh D. Mitchell; Carrie D. Nicora; Chelsea M. Hutchinson; Vanessa Paurus; Samuel O. Purvine; Chaevien S. Clendinen; Galya Orr; Scott E. Baker; Miia R. Mäkelä; Ronald P. de Vries
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Exploring the complexity of xylitol production in the fungal cell factory Aspergillus niger
errENZYME AND MICROBIAL TECHNOLOGY
IF3.7
err2025-02-01
err0
errOAAI
errMuller, Astrid; Meng, Jiali; Kuijpers, Robin; Makela, Miia R.; de Vries, Ronald P.
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Section-level genome sequencing and comparative genomics of Aspergillus sections Cavernicolus and Usti
errSTUDIES IN MYCOLOGY
IF17.1
err2025-01-01
err0
PREAI
errNybo, J. L.; Vesth, T. C.; Theobald, S.; Frisvad, J. C.; Larsen, T. O.; Kjaerboelling, I.; Rothschild-Mancinelli, K.; Lyhne, E. K.; Barry, K.; Clum, A.; Yoshinaga, Y.; Ledsgaard, L.; Daum, C.; Lipzen, A.; Kuo, A.; Riley, R.; Mondo, S.; Labutti, K.; Haridas, S.; Pangalinan, J.; Salamov, A. A.; Simmons, B. A.; Magnuson, J. K.; Chen, J.; Drula, E.; Henrissat, B.; Wiebenga, A.; Lubbers, R. J. M.; Muller, A.; Gomes, A. C. dos Santos; Makela, M. R.; Stajich, J. E.; Grigorie, I., V; Mortensen, U. H.; Andersen, M. R.
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Discovery of alkaline laccases from basidiomycete fungi through machine learning-based approach
errBIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS
IF4.6
err2024-09-11
err0
errOAAI
errWan, Xing; Shahrear, Sazzad; Chew, Shea Wen; Vilaplana, Francisco; Makela, Miia R.
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Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi
errGIGASCIENCE
IF3.9
err2024-06-28
err1
errOAAI
errBaroncelli, Riccardo; Cobo-Diaz, Jose F.; Benocci, Tiziano; Peng, Mao; Battaglia, Evy; Haridas, Sajeet; Andreopoulos, William; Labutti, Kurt; Pangilinan, Jasmyn; Lipzen, Anna; Koriabine, Maxim; Bauer, Diane; Le Floch, Gaetan; Makela, Miia R.; Drula, Elodie; Henrissat, Bernard; Grigoriev, Igor, V; Crouch, Jo Anne; de Vries, Ronald P.; Sukno, Serenella A.; Thon, Michael R.
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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
errBIORESOURCE TECHNOLOGY
IF9
err2024-01-01
err3
errOAAI
errXu, Li; Li, Jiajia; Ramos, Victor M. Gonzalez; Lyra, Christina; Wiebenga, Ad; Grigoriev, Igor V.; Vries, Ronald P. de; Makela, Miia R.; Peng, Mao
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errSave
Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
errCURRENT RESEARCH IN BIOTECHNOLOGY
IF4
err2024-01-01
err0
errOAAI
errRamos, Victor M. Gonzalez; Mueller, Astrid; Peng, Mao; Pawlowski, Megan; Lipzen, Anna; Ng, Vivian; Singan, Vasanth; Wang, Mei; de Vries, Ronald P.; Grigoriev, Igor V.; Kowalczyk, Joanna E.; Makela, Miia R.
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The transcriptomic response of two basidiomycete fungi to plant biomass is modulated by temperature to a different extent
errMICROBIOLOGICAL RESEARCH
IF6.9
err2023-05-01
err1
errOAAI
errPeng, Mao; Bervoets, Sander; Chin-A-Woeng, Thommas; Granchi, Zoraide; Hilden, Kristiina; Makela, Miia R.; de Vries, Ronald P.
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GalR, GalX and AraR co-regulate d-galactose and l-arabinose utilization in Aspergillus nidulans
errMICROBIAL BIOTECHNOLOGY
IF5.2
err2022-02-25
err4
errOAAI
errMeng, Jiali; Nemeth, Zoltan; Peng, Mao; Fekete, Erzsebet; Garrigues, Sandra; Lipzen, Anna; Ng, Vivian; Savage, Emily; Zhang, Yu; Grigoriev, Igor, V; Makela, Miia R.; Karaffa, Levente; de Vries, Ronald P.
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Xylitol production from plant biomass by Aspergillus niger through metabolic engineering
errBIORESOURCE TECHNOLOGY
IF9
err2022-01-01
err24
errOAAI
errMeng, Jiali; Chroumpi, Tania; Makela, Miia R.; de Vries, Ronald P.
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The Cultivation Method Affects the Transcriptomic Response of Aspergillus niger to Growth on Sugar Beet Pulp
errMICROBIOLOGY SPECTRUM
IF3.8
err2021-09-03
err10
errOAAI
errGarrigues, Sandra; Kun, Roland S.; Peng, Mao; Gruben, Birgit S.; Gelber, Isabelle Benoit; Makela, Miia; de Vries, Ronald P.
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Depolymerization of biorefinery lignin by improved laccases of the white-rot fungus Obba rivulosa
errMICROBIAL BIOTECHNOLOGY
IF5.2
err2021-07-26
err5
errOAAI
errWallenius, Janne; Kontro, Jussi; Lyra, Christina; Kuuskeri, Jaana; Wan, Xing; Kahkonen, Mika A.; Baig, Irshad; Kamer, Paul C. J.; Sipila, Jussi; Makela, Miia R.; Nousiainen, Paula; Hilden, Kristiina
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Revisiting a 'simple' fungal metabolic pathway reveals redundancy, complexity and diversity
errMICROBIAL BIOTECHNOLOGY
IF5.2
err2021-03-05
err16
errOAAI
errChroumpi, Tania; Peng, Mao; Aguilar-Pontes, Maria Victoria; Mueller, Astrid; Wang, Mei; Yan, Juying; Lipzen, Anna; Ng, Vivian; Grigoriev, Igor V.; Makela, Miia R.; deVries, Ronald P.
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Discovery and Functional Analysis of a Salicylic Acid Hydroxylase from Aspergillus niger
errAPPLIED AND ENVIRONMENTAL MICROBIOLOGY
IF3.7
err2021-02-26
err21
errOAAI
errLubbers, Ronnie J. M.; Dilokpimol, Adiphol; Visser, Jaap; Hilden, Kristiina S.; Makela, Miia R.; de Vries, Ronald P.
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Engineering of primary carbon metabolism in filamentous fungi
errBIOTECHNOLOGY ADVANCES
IF12.5
err2020-11-01
err36
errOAAI
errChroumpi, Tania; Makela, Miia R.; de Vries, Ronald P.
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Penicillium subrubescens adapts its enzyme production to the composition of plant biomass
errBIORESOURCE TECHNOLOGY
IF9
err2020-09-01
err16
errOAAI
errDilokpimol, Adiphol; Peng, Mao; Di Falco, Marcos; Woeng, Thomas Chin A.; Hegi, Rosa M. W.; Granchi, Zoraide; Tsang, Adrian; Hilden, Kristiina S.; Makela, Miia R.; de Vries, Ronald P.
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Conserved white-rot enzymatic mechanism for wood decay in the Basidiomycota genus Pycnoporus
errDNA RESEARCH
IF2.9
err2020-06-12
err27
errOAAI
errMiyauchi, Shingo; Hage, Hayat; Drula, Elodie; Lesage-Meessen, Laurence; Berrin, Jean-Guy; Navarro, David; Favel, Anne; Chaduli, Delphine; Grisel, Sacha; Haon, Mireille; Piumi, Francois; Levasseur, Anthony; Lomascolo, Anne; Ahrendt, Steven; Barry, Kerrie; LaButti, Kurt M.; Chevret, Didier; Daum, Chris; Mariette, Jerome; Klopp, Christophe; Cullen, Daniel; de Vries, Ronald P.; Gathman, Allen C.; Hainaut, Matthieu; Henrissat, Bernard; Hilden, Kristiina S.; Kuees, Ursula; Lilly, Walt; Lipzen, Anna; Makela, Miia R.; Martinez, Angel T.; Morel-Rouhier, Melanie; Morin, Emmanuelle; Pangilinan, Jasmyn; Ram, Arthur F. J.; Wosten, Han A. B.; Ruiz-Duenas, Francisco J.; Riley, Robert; Record, Eric; Grigoriev, Igor, V; Rosso, Marie-Noelle
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Genomic and Postgenomic Diversity of Fungal Plant Biomass Degradation Approaches
errTRENDS IN MICROBIOLOGY
IF14.9
err2020-06-01
err23
errOAAI
errde Vries, Ronald P.; Makela, Miia R.
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
B
Bernard Henrissat
H-index: 170 · Papers: 1.1K
A
Albert J. R. Heck
H-index: 132 · Papers: 1.2K
M
Mikael Knip
H-index: 122 · Papers: 1.1K
I
Igor V. Grigoriev
H-index: 120 · Papers: 858
J
Jens C. Frisvad
H-index: 112 · Papers: 625
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