Thomas J. Hall - Publications, H-index & Citations

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Thomas J. Hall

university college dublin

15H-index

54Paper Count

868Citation Count

Published Papers 13

Publication Date

Age-induced gene expression in Thoroughbred horse skeletal muscle highlights genes that enhance muscle architecture and function

Gene

IF2.4

2025-12-15

PREAI

Mian Feng; Thomas J. Hall; David E. MacHugh; Lisa M. Katz; Emmeline W. Hill

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Identifying variants of molecules through database search of mass spectra

Nature Computational Science

IF18.3

2025-12-01

PREAI

Mustafa Guler; Benjamin Krummenacher; Thomas Hall; Meghana Tandon; Joshua Abrams; Sanjana Ravi; Peng Chen; Matthew Lauber; Bahar Behsaz; Hosein Mohimani

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Integrative genomics sheds light on the immunogenetics of tuberculosis in cattle

COMMUNICATIONS BIOLOGY

IF5.1

2025-03-24

OAAI

O'Grady, John F.; Mchugo, Gillian P.; Ward, James A.; Hall, Thomas J.; O'Donnell, Sarah L. Faherty; Correia, Carolina N.; Browne, John A.; Mcdonald, Michael; Gormley, Eamonn; Riggio, Valentina; Prendergast, James G. D.; Clark, Emily L.; Pausch, Hubert; Meade, Kieran G.; Gormley, Isobel C.; Gordon, Stephen V.; Machugh, David E.

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Genome-wide local ancestry and the functional consequences of admixture in African and European cattle populations

HEREDITY

IF3.9

2024-11-08

PREAI

McHugo, Gillian P.; Ward, James A.; Ng'ang'a, Said Ismael; Frantz, Laurent A. F.; Salter-Townshend, Michael; Hill, Emmeline W.; O'Gorman, Grace M.; Meade, Kieran G.; Hall, Thomas J.; MacHugh, David E.

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Preferential differential gene expression within the WC1.1+ γδ T cell compartment in cattle naturally infected with Mycobacterium bovis

FRONTIERS IN IMMUNOLOGY

IF5.9

2023-10-24

OAAI

Bhat, Sajad A.; Elnaggar, Mahmoud; Hall, Thomas J.; McHugo, Gillian P.; Reid, Cian; MacHugh, David E.; Meade, Kieran G.

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Emergency airway management in a tertiary trauma centre (AIRMAN): a one-year prospective longitudinal study

CANADIAN JOURNAL OF ANESTHESIA-JOURNAL CANADIEN D ANESTHESIE

IF3.3

2023-01-20

OAAI

Hall, Thomas; Leeies, Murdoch; Funk, Duane; Hrymak, Carmen; Siddiqui, Faisal; Black, Holly; Webster, Kim; Tkach, Jenn; Waskin, Matt; Dufault, Brenden; Kowalski, Stephen

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Common protein-coding variants influence the racing phenotype in galloping racehorse breeds

COMMUNICATIONS BIOLOGY

IF5.1

2022-12-13

OAAI

Han, Haige; McGivney, Beatrice A.; Allen, Lucy; Bai, Dongyi; Corduff, Leanne R.; Davaakhuu, Gantulga; Davaasambuu, Jargalsaikhan; Dorjgotov, Dulguun; Hall, Thomas J.; Hemmings, Andrew J.; Holtby, Amy R.; Jambal, Tuyatsetseg; Jargalsaikhan, Badarch; Jargalsaikhan, Uyasakh; Kadri, Naveen K.; MacHugh, David E.; Pausch, Hubert; Readhead, Carol; Warburton, David; Dugarjaviin, Manglai; Hill, Emmeline W.

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Transcriptional Profiling of Monocytes Deficient in Nuclear Orphan Receptors NR4A2 and NR4A3 Reveals Distinct Signalling Roles Related to Antigen Presentation and Viral Response

FRONTIERS IN IMMUNOLOGY

IF5.9

2021-06-25

OAAI

Phelan, David E.; Shigemura, Masahiko; Aldhafiri, Sarah; Mota, Catarina; Hall, Thomas J.; Sznajder, Jacob I.; Murphy, Evelyn P.; Crean, Daniel; Cummins, Eoin P.

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Integrative genomics of the mammalian alveolar macrophage response to intracellular mycobacteria

BMC GENOMICS

IF3.7

2021-05-12

OAAI

Hall, Thomas J.; Mullen, Michael P.; McHugo, Gillian P.; Killick, Kate E.; Ring, Siobhan C.; Berry, Donagh P.; Correia, Carolina N.; Browne, John A.; Gordon, Stephen, V; MacHugh, David E.

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Identification of novel molecular markers of mastitis caused byStaphylococcus aureususing gene expression profiling in two consecutive generations of Chinese Holstein dairy cattle

JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY

IF6.5

2020-09-28

OAAI

Wang, Di; Liu, Lei; Augustino, Serafino M. A.; Duan, Tao; Hall, Thomas J.; MacHugh, David E.; Dou, Jinhuan; Zhang, Yi; Wang, Yachun; Yu, Ying

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The bovine alveolar macrophage DNA methylome is resilient to infection with Mycobacterium bovis

SCIENTIFIC REPORTS

IF3.9

2019-02-06

OAAI

O'Doherty, Alan Mark; Rue-Albrecht, Kevin Christophe; Magee, David Andrew; Ahting, Simone; Irwin, Rachelle E. Lizabeth; Hall, Thomas Jonathan; Browne, John Arthur; Nalpas, Nicolas Claude; Walsh, Colum P. Atrick; Gordon, Stephen Vincent; Wojewodzic, Marcin Wlodzimierz; MacHugh, David Evan

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Comparative genomic identification and validation of β-defensin genes in the Ovis aries genome

BMC GENOMICS

IF3.7

2017-04-04

OAAI

Hall, T. J.; McQuillan, C.; Finlay, E. K.; O'Farrelly, C.; Fair, S.; Meade, K. G.

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Brain magnetic resonance imaging CO2 stress testing in adolescent postconcussion syndrome

JOURNAL OF NEUROSURGERY

IF3.6

2016-09-01

OAAI

Mutch, W. Alan C.; Ellis, Michael J.; Ryner, Lawrence N.; Graham, M. Ruth; Dufault, Brenden; Gregson, Brian; Hall, Thomas; Bunge, Martin; Essig, Marco; Fisher, Joseph A.; Duffin, James; Mikulis, David J.

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Research Directions