Not logged inPipeline Olympics: continuable benchmarking of computational workflows for DNA methylation sequencing data against an experimental gold standard
Lin, Yu-Yu; Breuer, Kersten; Weichenhan, Dieter; Lafrenz, Pascal; Sarnataro, Antonella; Wilk, Agata; Chepeleva, Maryna; Mucke, Oliver; Schonung, Maximilian; Petermann, Franziska; Kensche, Philip Reiner; Weiser, Lena; Thommen, Frank; Giacomelli, Gideon; Nordstroem, Karl; Gonzalez-Avalos, Edahi; Merkel, Angelika; Kretzmer, Helene; Fischer, Jonas; Kramer, Stephen; Iskar, Murat; Wolf, Stephan; Buchhalter, Ivo; Esteller, Manel; Lawerenz, Christian; Twardziok, Sven; Zapatka, Marc; Hovestadt, Volker; Schlesner, Matthias; Schulz, Marcel H.; Hoffmann, Steve; Gerhauser, Clarissa; Walter, Jorn; Hartmann, Mark; Lipka, Daniel B.; Assenov, Yassen; Bock, Christoph; Plass, Christoph; Toth, Reka; Lutsik, Pavlo .png)
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SaveShare Save Spatiotemporal resolution of germinal center Tfh cell differentiation and divergence from central memory CD4+ T cell fateZhu, Fangming; McMonigle, Ryan J.; Schroeder, Andrew R.; Xia, Xianyou; Figge, David; Greer, Braxton D.; Gonzalez-Avalos, Edahi; Sialer, Diego O.; Wang, Yin-Hu; Chandler, Kelly M.; Getzler, Adam J.; Brown, Emily R.; Xiao, Changchun; Kutsch, Olaf; Harada, Yohsuke; Pipkin, Matthew E.; Hu, Hui Share Save Epigenetic remodeling by vitamin C potentiates plasma cell differentiationChen, Heng-Yi; Almonte-Loya, Ana; Lay, Fang-Yun; Hsu, Michael; Johnson, Eric; Gonzalez-Avalos, Edahi; Yin, Jieyun; Bruno, Richard S.; Ma, Qin; Ghoneim, Hazem E.; Wozniak, Daniel J.; Harrison, Fiona E.; Lio, Chan-Wang Jerry Share Save Epigenetic Remodeling by Vitamin C Potentiates the Differentiation of Mouse and Human Plasma CellsLio, Chan-Wang Jerry; Chen, Heng-Yi; Almonte-Loya, Ana; Lay, Fang-Yun; Johnson, Eric; Gonzalez-Avalos, Edahi; Yin, Jieyun; Ma, Qin; Wozniak, Daniel; Harrison, Fiona Share Save Share Save Share Save Share Save Share Save 5-Azacytidine Transiently Restores Dysregulated Erythroid Differentiation Gene Expression in TET2-Deficient Erythroleukemia CellsReilly, Brian M.; Luger, Timothy; Park, Soo; Lio, Chan-Wang Jerry; Gonzalez-Avalos, Edahi; Wheeler, Emily C.; Lee, Minjung; Williamson, Laura; Tanaka, Tiffany; Diep, Dinh; Zhang, Kun; Huang, Yun; Rao, Anjana; Bejar, Rafael Share Save TOX and TOX2 transcription factors cooperate with NR4A transcription factors to impose CD8+ T cell exhaustionSeo, Hyungseok; Chen, Joyce; Gonzalez-Avalos, Edahi; Samaniego-Castruita, Daniela; Das, Arundhoti; Wang, Yueqiang H.; Lopez-Moyado, Isaac F.; Georges, Romain O.; Zhang, Wade; Onodera, Atsushi; Wu, Cheng-Jang; Lu, Li-Fan; Hogan, Patrick G.; Bhandoola, Avinash; Rao, Anjana Share Save Share Save Share Save Share Save TET proteins regulate the lineage specification and TCR-mediated expansion of iNKT cellsTsagaratou, Ageliki; Gonzalez-Avalos, Edahi; Rautio, Sini; Scott-Browne, James P.; Togher, Susan; Pastor, William A.; Rothenberg, Ellen V.; Chavez, Lukas; Landesmaki, Harri; Rao, Anjana Share Save Acute loss of TET function results in aggressive myeloid cancer in miceAn, Jungeun; Gonzalez-Avalos, Edahi; Chawla, Ashu; Jeong, Mira; Lopez-Moyado, Isaac F.; Li, Wei; Goodell, Margaret A.; Chavez, Lukas; Ko, Myunggon; Rao, Anjana Share Save 
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