Not logged in Urobiota analysis and genomewide association study in pediatric recurrent urinary tract infections and vesicoureteral reflux Verbitsky, Miguel; Khosla, Pavan; Bivona, Daniel; Khan, Atlas; Gupta, Yask; Park, Heekuk; Shen, Tian H.; Ghotra, Aryan; Xu, Katherine; Ghavami, Iman A.; Krithivasan, Priya; Martino, Jeremiah; Sezin, Tanya; Lim, Tze Y.; Kolupaeva, Victoria; Limdi, Nita A.; Luo, Yuan; Hakonarson, Hakon; Sanna-Cherchi, Simone; Kiryluk, Krzysztof; Mendelsohn, Cathy L.; Uhlemann, Anne-Catrin; Barasch, Jonathan; Gharavi, Ali G. Share Save
Spatial Transcriptomics Unveils Intraductal Papillary Mucinous Neoplasm Heterogeneity: From Novel Clusters to Immune Dynamics Pankaj, Amaya; Raabe, Michael J.; Song, Yuhui; Patel, Bidish K.; Xu, Katherine; Kocher, Joshua R.; Caldwell, Nicholas J.; Ganci, Maria L.; Nieman, Linda T.; Mino-Kenudson, Mari; Deshpande, Vikram; Bardeesy, Nabeel; Fernandez-Del Castillo, Carlos; Aryee, Martin J.; Ting, David T.; Hernandez-Barco, Yasmin G. Share Save
Spns1 is an iron transporter essential for megalin-dependent endocytosis Beenken, Andrew; Shen, Tian; Jin, Guangchun; Ghotra, Aryan; Xu, Katherine; Nesanir, Kivanc; Sturley, Rachel E.; Vijayakumar, Soundarapandian; Khan, Atlas; Levitman, Abraham; Stauber, Jacob; Chavez, Estefania Y.; Robbins-Juarez, Shelief Y.; Hao, Luke; Field, Thomas B.; Erdjument-Bromage, Hediye; Neubert, Thomas A.; Shapiro, Lawrence; Qiu, Andong; Barasch, Jonathan Share Save
Single-cell transcriptomic analyses reveal distinct immune cell contributions to epithelial barrier dysfunction in checkpoint inhibitor colitis Thomas, Molly Fisher; Slowikowski, Kamil; Manakongtreecheep, Kasidet; Sen, Pritha; Samanta, Nandini; Tantivit, Jessica; Nasrallah, Mazen; Zubiri, Leyre; Smith, Neal P.; Tirard, Alice; Ramesh, Swetha; Arnold, Benjamin Y.; Nieman, Linda T.; Chen, Jonathan H.; Eisenhaure, Thomas; Pelka, Karin; Song, Yuhui; Xu, Katherine H.; Jorgji, Vjola; Pinto, Christopher J.; Sharova, Tatyana; Glasser, Rachel; Chan, Puiyee; Sullivan, Ryan J.; Khalili, Hamed; Juric, Dejan; Boland, Genevieve M.; Dougan, Michael; Hacohen, Nir; Li, Bo; Reynolds, Kerry L.; Villani, Alexandra-Chloe Share Save
Dissecting pancreatic cancer tumor- immune microenvironment crosstalk using spatial transcriptomics Pankaj, Amaya; Raabe, Michael J.; Patel, Bidish K.; Lang, Evan R.; Kocher, Joshua R.; Xu, Katherine H.; Nieman, Linda T.; Hwang, William L.; Kimmelman, Alec C.; Ryan, David P.; Hong, Theodore S.; Aryee, Martin J.; Ting, David T. Share Save
Human LINE-1 ORF1p retrotransposition independent function in pancreatic cancer You, Eunae; Patel, Bidish; Rojas, Alexandra; Ho, Natalie; Sun, Siyu; Raabe, Michael; Song, Yuhui; Phillips, Ildiko; Xu, Katherine; Richieri, Peter; Nieman, Linda; Greenbaum, Benjamin; Ting, David Share Save
Human lung cancer harbors spatially organized stem-immunity hubs associated with response to immunotherapy Chen, Jonathan H.; Nieman, Linda T.; Spurrell, Maxwell; Jorgji, Vjola; Elmelech, Liad; Richieri, Peter; Xu, Katherine H.; Madhu, Roopa; Parikh, Milan; Zamora, Izabella; Mehta, Arnav; Nabel, Christopher S.; Freeman, Samuel S.; Pirl, Joshua D.; Lu, Chenyue; Meador, Catherine B.; Barth, Jaimie L.; Sakhi, Mustafa; Tang, Alexander L.; Sarkizova, Siranush; Price, Colles; Fernandez, Nicolas F.; Emanuel, George; He, Jiang; Van Raay, Katrina; Reeves, Jason W.; Yizhak, Keren; Hofree, Matan; Shih, Angela; Sade-Feldman, Moshe; Boland, Genevieve M.; Pelka, Karin; Aryee, Martin J.; Mino-Kenudson, Mari; Gainor, Justin F.; Korsunsky, Ilya; Hacohen, Nir Share Save
Low nephron endowment increases susceptibility to renal stress and chronic kidney disease Good, Pamela I.; Li, Ling; Hurst, Holly A.; Herrera, Ileana Serrano; Xu, Katherine; Rao, Meenakshi; Bateman, David A.; Al-Awqati, Qais; D'Agati, Vivette D.; Costantini, Frank; Lin, Fangming Share Save
Soluble ACE2 Is Filtered into the Urine Nelson, Jonathan W.; Ortiz-Melo, David, I; Mattocks, Natalie K.; Emathinger, Jacqueline M.; Prescott, Jessica; Xu, Katherine; Griffiths, Robert C.; Wakasaki, Rumie; Piehowski, Paul D.; Hutchens, Michael P.; Coffman, Thomas M.; Gurley, Susan B. Share Save
Characterizing the effects of neoadjuvant therapy in PDAC Pankaj, Amaya; Raabe, Michael J.; Patel, Bidish; Lang, Evan R.; Kocher, Joshua; Xu, Katherine H.; Nieman, Linda T.; Kimmelman, Alec C.; Ryan, David P.; Hong, Theodore S.; Hwang, William L.; Aryee, Martin; Ting, David T. Share Save
Satellite repeat RNA expression in epithelial ovarian cancer associates with a tumor-immunosuppressive phenotype Porter, Rebecca L.; Sun, Siyu; Flores, Micayla N.; Berzolla, Emily; You, Eunae; Phillips, Ildiko E.; Neelima, K. C.; Desai, Niyati; Tai, Eric C.; Szabolcs, Annamaria; Lang, Evan R.; Pankaj, Amaya; Raabe, Michael J.; Thapar, Vishal; Xu, Katherine H.; Nieman, Linda T.; Rabe, Daniel C.; Kolin, David L.; Stover, Elizabeth H.; Pepin, David; Stott, Shannon L.; Deshpande, Vikram; Liu, Joyce F.; Solovyov, Alexander; Matulonis, Ursula A.; Greenbaum, Benjamin D.; Ting, David T. Share Save
Reverse Transcriptase Inhibition Disrupts Repeat Element Life Cycle in Colorectal Cancer Rajurkar, Mihir; Parikh, Aparna R.; Solovyov, Alexander; You, Eunae; Kulkarni, Anupriya S.; Chu, Chong; Xu, Katherine H.; Jaicks, Christopher; Taylor, Martin S.; Wu, Connie; Alexander, Katherine A.; Good, Charly R.; Szabolcs, Annamaria; Gerstberger, Stefanie; V. Tran, Antuan; Xu, Nova; Ebright, Richard Y.; Van Seventer, Emily E.; Vo, Kevin; Tai, Eric C.; Lu, Chenyue; Joseph-Chazan, Jasmin; Raabe, Michael J.; Nieman, Linda T.; Desai, Niyati; Arora, Kshitij S.; Ligorio, Matteo; Thapar, Vishal; Cohen, Limor; Garden, Padric M.; Senussi, Yasmeen; Zheng, Hui; Allen, Jill N.; Blaszkowsky, Lawrence S.; Clark, Jeffrey W.; Goyal, Lipika; Wo, Jennifer Y.; Ryan, David P.; Corcoran, Ryan B.; Deshpande, Vikram; Rivera, Miguel N.; Aryee, Martin J.; Hong, Theodore S.; Berger, Shelley L.; Walt, David R.; Burns, Kathleen H.; Park, Peter J.; Greenbaum, Benjamin D.; Ting, David T. Share Save
Snapshots of nascent RNA reveal cell- and stimulus-specific responses to acute kidney injury Shen, Tian Huai; Stauber, Jacob; Xu, Katherine; Jacunski, Alexandra; Paragas, Neal; Callahan, Miriam; Banlengchit, Run; Levitman, Abraham D.; De Oliveira, Beatriz Desanti; Beenken, Andrew; Grau, Madeleine S.; Mathieu, Edwin; Zhang, Qingyin; Li, Yuanji; Gopal, Tejashree; Askanase, Nathaniel; Arumugam, Siddarth; Mohan, Sumit; Good, Pamela, I; Stevens, Jacob S.; Lin, Fangming; Sia, Samuel K.; Lin, Chyuan-Sheng; D'Agati, Vivette; Kiryluk, Krzysztof; Tatonetti, Nicholas P.; Barasch, Jonathan Share Save
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Elevated Neutrophil Gelatinase-Associated Lipocalin Is Associated With the Severity of Kidney Injury and Poor Prognosis of Patients With COVID-19 Xu, Katherine; Shang, Ning; Levitman, Abraham; Corker, Alexa; Kudose, Satoru; Yaeh, Andrew; Neupane, Uddhav; Stevens, Jacob; Sampogna, Rosemary; Mills, Angela M.; D'Agati, Vivette; Mohan, Sumit; Kiryluk, Krzysztof; Barasch, Jonathan Share Save
Temporal and spatial heterogeneity of host response to SARS-CoV-2 pulmonary infection Desai, Niyati; Neyaz, Azfar; Szabolcs, Annamaria; Shih, Angela R.; Chen, Jonathan H.; Thapar, Vishal; Nieman, Linda T.; Solovyov, Alexander; Mehta, Arnav; Lieb, David J.; Kulkarni, Anupriya S.; Jaicks, Christopher; Xu, Katherine H.; Raabe, Michael J.; Pinto, Christopher J.; Juric, Dejan; Chebib, Ivan; Colvin, Robert B.; Kim, Arthur Y.; Monroe, Robert; Warren, Sarah E.; Danaher, Patrick; Reeves, Jason W.; Gong, Jingjing; Rueckert, Erroll H.; Greenbaum, Benjamin D.; Hacohen, Nir; Lagana, Stephen M.; Rivera, Miguel N.; Sholl, Lynette M.; Stone, James R.; Ting, David T.; Deshpande, Vikram Share Save
Rule Out Acute Kidney Injury in the Emergency Department With a Urinary Dipstick Stevens, Jacob S.; Xu, Katherine; Corker, Alexa; Gopal, Tejashree S.; Sayan, Osman R.; Geraghty, Erin P.; Yaeh, Andrew M.; Kosuri, Yaagnik D.; Burton, John R.; Lincoln, Saul, V; Callahan, Miriam P.; Breheney, Rebecca K.; Beenken, Andrew S.; Gamino, Juliana N.; Felman, Ariel E.; Gehani, Anjali; Giordano, Hayley A.; Gozali, Aileen; Herrera, Eddie F. Guerrero; Hatcher, Britney A.; Kheir, Lena A.; Li, Yuanji; Mitsui, Erika K.; Nha, Jae, I; Sayan, Alexander T.; Spaiser, Samuel J.; Arumugam, Siddarth; Sia, Samuel K.; King, Kristen L.; Mohan, Sumit; Barasch, Jonathan Share Save
Cell-specific image-guided transcriptomics identifies complex injuries caused by ischemic acute kidney injury in mice Miyazaki, Tomoaki; Gharib, Sina A.; Hsu, Yun-Wei A.; Xu, Katherine; Khodakivskyi, Pavlo; Kobayashi, Akio; Paragas, Jason; Klose, Alexander D.; Francis, Kevin P.; Dubikovskaya, Elena; Page-McCaw, Patrick S.; Barasch, Jonathan; Paragas, Neal Share Save
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