Not logged in NCBI Orthologs: Public Resource and Scalable Method for Computing High-Precision Orthologs Across Eukaryotic Genomes Oh, Dong-Ha; Astashyn, Alexander; Robbertse, Barbara; O'leary, Nuala A.; Anderson, W. Ray; Breen, Laurie; Cox, Eric; Ermolaeva, Olga; Falk, Robert; Hem, Vichet; Holmes, J. Bradley; Masterson, Patrick; Mcgarvey, Kelly M.; Mozes, Eyal; Torcivia, John P.; Tsuchiya, Mirian T. N.; Wallin, Craig; Thibaud-Nissen, Francoise; Murphy, Terence D.; Kodali, Vamsi K. Share Save
NCBI RefSeq: reference sequence standards through 25 years of curation and annotation Goldfarb, Tamara; Kodali, Vamsi K.; Pujar, Shashikant; Brover, Vyacheslav; Robbertse, Barbara; Farrell, Catherine M.; Oh, Dong-Ha; Astashyn, Alexander; Ermolaeva, Olga; Haddad, Diana; Hlavina, Wratko; Hoffman, Jinna; Jackson, John D.; Joardar, Vinita S.; Kristensen, David; Masterson, Patrick; Mcgarvey, Kelly M.; Mcveigh, Richard; Mozes, Eyal; Murphy, Michael R.; Schafer, Susan S.; Souvorov, Alexander; Spurrier, Brett; Strope, Pooja K.; Sun, Hanzhen; Vatsan, Anjana R.; Wallin, Craig; Webb, David; Brister, J. Rodney; Hatcher, Eneida; Kimchi, Avi; Klimke, William; Marchler-Bauer, Aron; Pruitt, Kim D.; Thibaud-Nissen, Francoise; Murphy, Terence D. Share Save
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NCBI Taxonomy: a comprehensive update on curation, resources and tools Schoch, Conrad L.; Ciufo, Stacy; Domrachev, Mikhail; Hotton, Carol L.; Kannan, Sivakumar; Khovanskaya, Rogneda; Leipe, Detlef; Mcveigh, Richard; O'Neill, Kathleen; Robbertse, Barbara; Sharma, Shobha; Soussov, Vladimir; Sullivan, John P.; Sun, Lu; Turner, Sean; Karsch-Mizrachi, Ilene Share Save
Unambiguous identification of fungi: where do we stand and how accurate and precise is fungal DNA barcoding? Luecking, Robert; Aime, M. Catherine; Robbertse, Barbara; Miller, Andrew N.; Ariyawansa, Hiran A.; Aoki, Takayuki; Cardinali, Gianluigi; Crous, Pedro W.; Druzhinina, Irina S.; Geiser, David M.; Hawksworth, David L.; Hyde, Kevin D.; Irinyi, Laszlo; Jeewon, Rajesh; Johnston, Peter R.; Kirk, Paul M.; Malosso, Elaine; May, Tom W.; Meyer, Wieland; Opik, Maarja; Robert, Vincent; Stadler, Marc; Thines, Marco; Duong Vu; Yurkov, Andrey M.; Zhang, Ning; Schoch, Conrad L. Share Save
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Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation O'Leary, Nuala A.; Wright, Mathew W.; Brister, J. Rodney; Ciufo, Stacy; McVeigh, Diana Haddad Rich; Rajput, Bhanu; Robbertse, Barbara; Smith-White, Brian; Ako-Adjei, Danso; Astashyn, Alexander; Badretdin, Azat; Bao, Yiming; Blinkova, Olga; Brover, Vyacheslav; Chetvernin, Vyacheslav; Choi, Jinna; Cox, Eric; Ermolaeva, Olga; Farrell, Catherine M.; Goldfarb, Tamara; Gupta, Tripti; Haft, Daniel; Hatcher, Eneida; Hlavina, Wratko; Joardar, Vinita S.; Kodali, Vamsi K.; Li, Wenjun; Maglott, Donna; Masterson, Patrick; McGarvey, Kelly M.; Murphy, Michael R.; O'Neill, Kathleen; Pujar, Shashikant; Rangwala, Sanjida H.; Rausch, Daniel; Riddick, Lillian D.; Schoch, Conrad; Shkeda, Andrei; Storz, Susan S.; Sun, Hanzhen; Thibaud-Nissen, Francoise; Tolstoy, Igor; Tully, Raymond E.; Vatsan, Anjana R.; Wallin, Craig; Webb, David; Wu, Wendy; Landrum, Melissa J.; Kimchi, Avi; Tatusova, Tatiana; DiCuccio, Michael; Kitts, Paul; Murphy, Terence D.; Pruitt, Kim D. Share Save
Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi Schoch, Conrad L.; Robbertse, Barbara; Robert, Vincent; Duong Vu; Cardinali, Gianluigi; Irinyi, Laszlo; Meyer, Wieland; Nilsson, R. Henrik; Hughes, Karen; Miller, Andrew N.; Kirk, Paul M.; Abarenkov, Kessy; Aime, M. Catherine; Ariyawansa, Hiran A.; Bidartondo, Martin; Boekhout, Teun; Buyck, Bart; Cai, Qing; Chen, Jie; Crespo, Ana; Crous, Pedro W.; Damm, Ulrike; De Beer, Z. Wilhelm; Dentinger, Bryn T. M.; Divakar, Pradeep K.; Duenas, Margarita; Feau, Nicolas; Fliegerova, Katerina; Garcia, Miguel A.; Ge, Zai-Wei; Griffith, GarethW.; Groenewald, Johannes Z.; Groenewald, Marizeth; Grube, Martin; Gryzenhout, Marieka; Gueidan, Cecile; Guo, Liangdong; Hambleton, Sarah; Hamelin, Richard; Hansen, Karen; Hofstetter, Valerie; Hong, Seung-Beom; Houbraken, Jos; Hyde, Kevin D.; Inderbitzin, Patrik; Johnston, Peter R.; Karunarathna, Samantha C.; Koljalg, Urmas; Kovacs, Gabor M.; Kraichak, Ekaphan; Krizsan, Krisztina; Kurtzman, Cletus P.; Larsson, Karl-Henrik; Leavitt, Steven; Letcher, Peter M.; Liimatainen, Kare; Liu, Jian-Kui; Lodge, D. Jean; Luangsa-ard, Janet Jennifer; Lumbsch, H. Thorsten; Maharachchikumbura, Sajeewa S. N.; Manamgoda, Dimuthu; Martin, Maria P.; Minnis, Andrew M.; Moncalvo, Jean-Marc; Mule, Giuseppina; Nakasone, Karen K.; Niskanen, Tuula; Olariaga, Ibai; Papp, Tamas; Petkovits, Tamas; Pino-Bodas, Raquel; Powell, Martha J.; Raja, Huzefa A.; Redecker, Dirk; Sarmiento-Ramirez, J. M.; Seifert, Keith A.; Shrestha, Bhushan; Stenroos, Soili; Stielow, Benjamin; Suh, Sung-Oui; Tanaka, Kazuaki; Tedersoo, Leho; Teresa Telleria, M.; Udayanga, Dhanushka; Untereiner, Wendy A.; Dieguez Uribeondo, Javier; Subbarao, Krishna V.; Vagvoelgyi, Csaba; Visagie, Cobus; Voigt, Kerstin; Walker, Donald M.; Weir, Bevan S.; Weiss, Michael; Wijayawardene, Nalin N.; Wingfield, Michael J.; Xu, J. P.; Yang, Zhu L.; Zhang, Ning; Zhuang, Wen-Ying; Federhen, Scott Share Save
The Genera of Fungi: fixing the application of type species of generic names Crous, Pedro W.; Giraldo, Alejandra; Hawksworth, David L.; Robert, Vincent; Kirk, Paul M.; Guarro, Josep; Robbertse, Barbara; Schoch, Conrad L.; Damm, Ulrike; Trakunyingcharoen, Thippawan; Groenewald, Johannes Z. Share Save
Transposable element-assisted evolution and adaptation to host plant within the Leptosphaeria maculans-Leptosphaeria biglobosa species complex of fungal pathogens Grandaubert, Jonathan; Lowe, Rohan G. T.; Soyer, Jessica L.; Schoch, Conrad L.; de Wouw, Angela P. Van; Fudal, Isabelle; Robbertse, Barbara; Lapalu, Nicolas; Links, Matthew G.; Ollivier, Benedicte; Linglin, Juliette; Barbe, Valerie; Mangenot, Sophie; Cruaud, Corinne; Borhan, Hossein; Howlett, Barbara J.; Balesdent, Marie-Helene; Rouxel, Thierry Share Save
MycoBank gearing up for new horizons Robert, Vincent; Duong Vu; Amor, Ammar Ben Hadj; van de Wiele, Nathalie; Brouwer, Carlo; Jabas, Bernard; Szoke, Szaniszlo; Dridi, Ahmed; Triki, Maher; ben Daoud, Samy; Chouchen, Oussema; Vaas, Lea; de Cock, Arthur; Stalpers, Joost A.; Stalpers, Dora; Verkley, Gerard J. M.; Groenewald, Marizeth; dos Santos, Felipe Borges; Stegehuis, Gerrit; Li, Wei; Wu, Linhuan; Zhang, Run; Ma, Juncai; Zhou, Miaomiao; Gorjon, Sergio Perez; Eurwilaichitr, Lily; Ingsriswang, Supawadee; Hansen, Karen; Schoch, Conrad; Robbertse, Barbara; Irinyi, Laszlo; Meyer, Wieland; Cardinali, Gianluigi; Hawksworth, David L.; Taylor, John W.; Crous, Pedro W. Share Save
Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade Thrash, J. Cameron; Boyd, Alex; Huggett, Megan J.; Grote, Jana; Carini, Paul; Yoder, Ryan J.; Robbertse, Barbara; Spatafora, Joseph W.; Rappe, Michael S.; Giovannoni, Stephen J. Share Save
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The Ascomycota Tree of Life: A Phylum-wide Phylogeny Clarifies the Origin and Evolution of Fundamental Reproductive and Ecological Traits Schoch, Conrad L.; Sung, Gi-Ho; Lopez-Giraldez, Francesc; Townsend, Jeffrey P.; Miadlikowska, Jolanta; Hofstetter, Valerie; Robbertse, Barbara; Matheny, P. Brandon; Kauff, Frank; Wang, Zheng; Gueidan, Cecile; Andrie, Rachael M.; Trippe, Kristin; Ciufetti, Linda M.; Wynns, Anja; Fraker, Emily; Hodkinson, Brendan P.; Bonito, Gregory; Groenewald, Johannes Z.; Arzanlou, Mahdi; de Hoog, G. Sybren; Crous, Pedro W.; Hewitt, David; Pfister, Donald H.; Peterson, Kristin; Gryzenhout, Marieka; Wingfield, Michael J.; Aptroot, Andre; Suh, Sung-Oui; Blackwell, Meredith; Hillis, David M.; Griffith, Gareth W.; Castlebury, Lisa A.; Rossman, Amy Y.; Lumbsch, H. Thorsten; Luecking, Robert; Buedel, Burkhard; Rauhut, Alexandra; Diederich, Paul; Ertz, Damien; Geiser, David M.; Hosaka, Kentaro; Inderbitzin, Patrik; Kohlmeyer, Jan; Volkmann-Kohlmeyer, Brigitte; Mostert, Lizel; O'Donnell, Kerry; Sipman, Harrie; Rogers, Jack D.; Shoemaker, Robert A.; Sugiyama, Junta; Summerbell, Richard C.; Untereiner, Wendy; Johnston, Peter R.; Stenroos, Soili; Zuccaro, Alga; Dyer, Paul S.; Crittenden, Peter D.; Cole, Mariette S.; Hansen, Karen; Trappe, James M.; Yahr, Rebecca; Lutzoni, Francois; Spatafora, Joseph W. Share Save
A class-wide phylogenetic assessment of Dothideomycetes Schoch, C. L.; Crous, P. W.; Groenewald, J. Z.; Boehm, E. W. A.; Burgess, T. I.; de Gruyter, J.; de Hoog, G. S.; Dixon, L. J.; Grube, M.; Gueidan, C.; Harada, Y.; Hatakeyama, S.; Hirayama, K.; Hosoya, T.; Huhndorf, S. M.; Hyde, K. D.; Jones, E. B. G.; Kohlmeyer, J.; Kruys, A.; Li, Y. M.; Lucking, R.; Lumbsch, H. T.; Marvanova, L.; Mbatchou, J. S.; McVay, A. H.; Miller, A. N.; Mugambi, G. K.; Muggia, L.; Nelsen, M. P.; Nelson, P.; Owensby, C. A.; Phillips, A. J. L.; Phongpaichit, S.; Pointing, S. B.; Pujade-Renaud, V.; Raja, H. A.; Plata, E. Rivas; Robbertse, B.; Ruibal, C.; Sakayaroj, J.; Sano, T.; Selbmann, L.; Shearer, C. A.; Shirouzu, T.; Slippers, B.; Suetrong, S.; Tanaka, K.; Volkmann-Kohlmeyer, B.; Wingfield, M. J.; Wood, A. R.; Woudenberg, J. H. C.; Yonezawa, H.; Zhang, Y.; Spatafora, J. W. Share Save
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) (vol 26, pg 553, 2008) Martinez, Diego; Berka, Randy M.; Henrissat, Bernard; Saloheimo, Markku; Arvas, Mikko; Baker, Scott E.; Chapman, Jarod; Chertkov, Olga; Coutinho, Pedro M.; Cullen, Dan; Danchin, Etienne G. J.; Grigoriev, Igor V.; Harris, Paul; Jackson, Melissa; Kubicek, Christian P.; Han, Cliff S.; Ho, Isaac; Larrondo, Luis F.; de Leon, Alfredo Lopez; Magnuson, Jon K.; Merino, Sandy; Misra, Monica; Nelson, Beth; Putnam, Nicholas; Robbertse, Barbara; Salamov, Asaf A.; Schmoll, Monika; Terry, Astrid; Thayer, Nina; Westerholm-Parvinen, Ann; Schoch, Conrad L.; Yao, Jian; Barabote, Ravi; Nelson, Mary Anne; Detter, Chris; Bruce, David; Kuske, Cheryl R.; Xie, Gary; Richardson, Paul; Rokhsar, Daniel S.; Lucas, Susan M.; Rubin, Edward M.; Dunn-Coleman, Nigel; Ward, Michael; Brettin, Thomas S. Share Save
Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) Martinez, Diego; Berka, Randy M.; Henrissat, Bernard; Saloheimo, Markku; Arvas, Mikko; Baker, Scott E.; Chapman, Jarod; Chertkov, Olga; Coutinho, Pedro M.; Cullen, Dan; Danchin, Etienne G. J.; Grigoriev, Igor V.; Harris, Paul; Jackson, Melissa; Kubicek, Christian P.; Han, Cliff S.; Ho, Isaac; Larrondo, Luis F.; de Leon, Alfredo Lopez; Magnuson, Jon K.; Merino, Sandy; Misra, Monica; Nelson, Beth; Putnam, Nicholas; Robbertse, Barbara; Salamov, Asaf A.; Schmoll, Monika; Terry, Astrid; Thayer, Nina; Westerholm-Parvinen, Ann; Schoch, Conrad L.; Yao, Jian; Barbote, Ravi; Nelson, Mary Anne; Detter, Chris; Bruce, David; Kuske, Cheryl R.; Xie, Gary; Richardson, Paul; Rokhsar, Daniel S.; Lucas, Susan M.; Rubin, Edward M.; Dunn-Coleman, Nigel; Ward, Michael; Brettin, Thomas S. Share Save
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