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Alexandra Bignell
wellcome trust sanger institute
18H-index
21Paper Count
2.2WCitation Count
Published Papers 11
Publication Date
- Publication Date
- Impact Factor
- Citations
GENCODE: reference annotation for the human and mouse genomes in 2023
NUCLEIC ACIDS RESEARCH
2022-11-24
89
OAAI
Frankish, Adam; Carbonell-Sala, Silvia; Diekhans, Mark; Jungreis, Irwin; Loveland, Jane E.; Mudge, Jonathan M.; Sisu, Cristina; Wright, James C.; Arnan, Carme; Barnes, If; Banerjee, Abhimanyu; Bennett, Ruth; Berry, Andrew; Bignell, Alexandra; Boix, Carles; Calvet, Ferriol; Cerdan-Velez, Daniel; Cunningham, Fiona; Davidson, Claire; Donaldson, Sarah; Dursun, Cagatay; Fatima, Reham; Giorgetti, Stefano; Giron, Carlos Garcia; Gonzalez, Jose Manuel; Hardy, Matthew; Harrison, Peter W.; Hourlier, Thibaut; Hollis, Zoe; Hunt, Toby; James, Benjamin; Jiang, Yunzhe; Johnson, Rory; Kay, Mike; Lagarde, Julien; Martin, Fergal J.; Gomez, Laura Martinez; Nair, Surag; Ni, Pengyu; Pozo, Fernando; Ramalingam, Vivek; Ruffier, Magali; Schmitt, Bianca M.; Schreiber, Jacob M.; Steed, Emily; Suner, Marie-Marthe; Sumathipala, Dulika; Sycheva, Irina; Uszczynska-Ratajczak, Barbara; Wass, Elizabeth; Yang, Yucheng T.; Yates, Andrew; Zafrulla, Zahoor; Choudhary, Jyoti S.; Gerstein, Mark; Guigo, Roderic; Hubbard, Tim J. P.; Kellis, Manolis; Kundaje, Anshul; Paten, Benedict; Tress, Michael L.; Flicek, Paul
IF13.1
Ensembl 2023
NUCLEIC ACIDS RESEARCH
2022-11-01
378
OAAI
Martin, Fergal J.; Amode, M. Ridwan; Aneja, Alisha; Austine-Orimoloye, Olanrewaju; Azov, Andrey G.; Barnes, If; Becker, Arne; Bennett, Ruth; Berry, Andrew; Bhai, Jyothish; Bhurji, Simarpreet Kaur; Bignell, Alexandra; Boddu, Sanjay; Lins, Paulo R. Branco; Brooks, Lucy; Ramaraju, Shashank Budhanuru; Charkhchi, Mehrnaz; Cockburn, Alexander; Fiorretto, Luca Da Rin; Davidson, Claire; Dodiya, Kamalkumar; Donaldson, Sarah; El Houdaigui, Bilal; El Naboulsi, Tamara; Fatima, Reham; Giron, Carlos Garcia; Genez, Thiago; Ghattaoraya, Gurpreet S.; Martinez, Jose Gonzalez; Guijarro, Cristi; Hardy, Matthew; Hollis, Zoe; Hourlier, Thibaut; Hunt, Toby; Kay, Mike; Kaykala, Vinay; Le, Tuan; Lemos, Diana; Marques-Coelho, Diego; Marugan, Jose Carlos; Merino, Gabriela Alejandra; Mirabueno, Louisse Paola; Mushtaq, Aleena; Hossain, Syed Nakib; Ogeh, Denye N.; Sakthivel, Manoj Pandian; Parker, Anne; Perry, Malcolm; Pilizota, Ivana; Prosovetskaia, Irina; Perez-Silva, Jose G.; Salam, Ahamed Imran Abdul; Saraiva-Agostinho, Nuno; Schuilenburg, Helen; Sheppard, Dan; Sinha, Swati; Sipos, Botond; Stark, William; Steed, Emily; Sukumaran, Ranjit; Sumathipala, Dulika; Suner, Marie-Marthe; Surapaneni, Likhitha; Sutinen, Kyosti; Szpak, Michal; Tricomi, Francesca Floriana; Urbina-Gomez, David; Veidenberg, Andres; Walsh, Thomas A.; Walts, Brandon; Wass, Elizabeth; Willhoft, Natalie; Allen, Jamie; Alvarez-Jarreta, Jorge; Chakiachvili, Marc; Flint, Bethany; Giorgetti, Stefano; Haggerty, Leanne; Ilsley, Garth R.; Loveland, Jane E.; Moore, Benjamin; Mudge, Jonathan M.; Tate, John; Thybert, David; Trevanion, Stephen J.; Winterbottom, Andrea; Frankish, Adam; Hunt, Sarah E.; Ruffier, Magali; Cunningham, Fiona; Dyer, Sarah; Finn, Robert D.; Howe, Kevin L.; Harrison, Peter W.; Yates, Andrew D.; Flicek, Paul
IF13.1
Ensembl 2022
NUCLEIC ACIDS RESEARCH
2021-11-17
1.1K
OAAI
Cunningham, Fiona; Allen, James E.; Allen, Jamie; Alvarez-Jarreta, Jorge; Amode, M. Ridwan; Armean, Irina M.; Austine-Orimoloye, Olanrewaju; Azov, Andrey G.; Barnes, If; Bennett, Ruth; Berry, Andrew; Bhai, Jyothish; Bignell, Alexandra; Billis, Konstantinos; Boddu, Sanjay; Brooks, Lucy; Charkhchi, Mehrnaz; Cummins, Carla; Fioretto, Luca Da Rin; Davidson, Claire; Dodiya, Kamalkumar; Donaldson, Sarah; El Houdaigui, Bilal; El Naboulsi, Tamara; Fatima, Reham; Giron, Carlos Garcia; Genez, Thiago; Martinez, Jose Gonzalez; Guijarro-Clarke, Cristina; Gymer, Arthur; Hardy, Matthew; Hollis, Zoe; Hourlier, Thibaut; Hunt, Toby; Juettemann, Thomas; Kaikala, Vinay; Kay, Mike; Lavidas, Ilias; Le, Tuan; Lemos, Diana; Marugan, Jose Carlos; Mohanan, Shamika; Mushtaq, Aleena; Naven, Marc; Ogeh, Denye N.; Parker, Anne; Parton, Andrew; Perry, Malcolm; Pilizota, Ivana; Prosovetskaia, Irina; Sakthivel, Manoj Pandian; Salam, Ahamed Imran Abdul; Schmitt, Bianca M.; Schuilenburg, Helen; Sheppard, Dan; Perez-Silva, Jose G.; Stark, William; Steed, Emily; Sutinen, Kyosti; Sukumaran, Ranjit; Sumathipala, Dulika; Suner, Marie-Marthe; Szpak, Michal; Thormann, Anja; Tricomi, Francesca Floriana; Urbina-Gomez, David; Veidenberg, Andres; Walsh, Thomas A.; Walts, Brandon; Willhoft, Natalie; Winterbottom, Andrea; Wass, Elizabeth; Chakiachvili, Marc; Flint, Bethany; Frankish, Adam; Giorgetti, Stefano; Haggerty, Leanne; Hunt, Sarah E.; IIsley, Garth R.; Loveland, Jane E.; Martin, Fergal J.; Moore, Benjamin; Mudge, Jonathan M.; Muffato, Matthieu; Perry, Emily; Ruffier, Magali; Tate, John; Thybert, David; Trevanion, Stephen J.; Dyer, Sarah; Harrison, Peter W.; Howe, Kevin L.; Yates, Andrew D.; Zerbino, Daniel R.; Flicek, Paul
IF13.1
GENCODE 2021
NUCLEIC ACIDS RESEARCH
2020-12-03
647
OAAI
Frankish, Adam; Diekhans, Mark; Jungreis, Irwin; Lagarde, Julien; Loveland, Jane E.; Mudge, Jonathan M.; Sisu, Cristina; Wright, James C.; Armstrong, Joel; Barnes, If; Berry, Andrew; Bignell, Alexandra; Boix, Carles; Carbonell Sala, Silvia; Cunningham, Fiona; Di Domenico, Tomas; Donaldson, Sarah; Fiddes, Ian T.; Giron, Carlos Garcia; Gonzalez, Jose Manuel; Grego, Tiago; Hardy, Matthew; Hourlier, Thibaut; Howe, Kevin L.; Hunt, Toby; Izuogu, Osagie G.; Johnson, Rory; Martin, Fergal J.; Martinez, Laura; Mohanan, Shamika; Muir, Paul; Navarro, Fabio C. P.; Parker, Anne; Pei, Baikang; Pozo, Fernando; Riera, Ferriol Calvet; Ruffier, Magali; Schmitt, Bianca M.; Stapleton, Eloise; Suner, Marie-Marthe; Sycheva, Irina; Uszczynska-Ratajczak, Barbara; Wolf, Maxim Y.; Xu, Jinuri; Yang, Yucheng T.; Yates, Andrew; Zerbino, Daniel; Zhang, Yan; Choudhary, Jyoti S.; Gerstein, Mark; Guigo, Roderic; Hubbard, Tim J. P.; Kellis, Manolis; Paten, Benedict; Tress, Michael L.; Flicek, Paul
IF13.1
GENCODE reference annotation for the human and mouse genomes
NUCLEIC ACIDS RESEARCH
2018-10-24
2.0K
OAAI
Frankish, Adam; Diekhans, Mark; Ferreira, Anne-Maud; Johnson, Rory; Jungreis, Irwin; Loveland, Jane; Mudge, Jonathan M.; Sisu, Cristina; Wright, James; Armstrong, Joel; Barnes, If; Berry, Andrew; Bignell, Alexandra; Sala, Silvia Carbonell; Chrast, Jacqueline; Cunningham, Fiona; Di Domenico, Tomas; Donaldson, Sarah; Fiddes, Ian T.; Giron, Carlos Garcia; Gonzalez, Jose Manuel; Grego, Tiago; Hardy, Matthew; Hourlier, Thibaut; Hunt, Toby; Izuogu, Osagie G.; Lagarde, Julien; Martin, Fergal J.; Martinez, Laura; Mohanan, Shamika; Muir, Paul; Navarro, Fabio C. P.; Parker, Anne; Pei, Baikang; Pozo, Fernando; Ruffier, Magali; Schmitt, Bianca M.; Stapleton, Eloise; Suner, Marie-Marthe; Sycheva, Irina; Uszczynska-Ratajczak, Barbara; Xu, Jinuri; Yates, Andrew; Zerbino, Daniel; Zhang, Yan; Aken, Bronwen; Choudhary, Jyoti S.; Gerstein, Mark; Guigo, Roderic; Hubbard, Tim J. P.; Kellis, Manolis; Paten, Benedict; Reymond, Alexandre; Tress, Michael L.; Flicek, Paul
IF13.1
GENCODE: The reference human genome annotation for The ENCODE Project
GENOME RESEARCH
2012-09-05
3.9K
OAAI
Harrow, Jennifer; Frankish, Adam; Gonzalez, Jose M.; Tapanari, Electra; Diekhans, Mark; Kokocinski, Felix; Aken, Bronwen L.; Barrell, Daniel; Zadissa, Amonida; Searle, Stephen; Barnes, If; Bignell, Alexandra; Boychenko, Veronika; Hunt, Toby; Kay, Mike; Mukherjee, Gaurab; Rajan, Jeena; Despacio-Reyes, Gloria; Saunders, Gary; Steward, Charles; Harte, Rachel; Lin, Michael; Howald, Cedric; Tanzer, Andrea; Derrien, Thomas; Chrast, Jacqueline; Walters, Nathalie; Balasubramanian, Suganthi; Pei, Baikang; Tress, Michael; Manuel Rodriguez, Jose; Ezkurdia, Iakes; van Baren, Jeltje; Brent, Michael; Haussler, David; Kellis, Manolis; Valencia, Alfonso; Reymond, Alexandre; Gerstein, Mark; Guigo, Roderic; Hubbard, Tim J.
IF5.5
The GENCODE human gene set
GENOME BIOLOGY
2010-01-01
4
OAAI
Searle, S.; Frankish, A.; Bignell, A.; Aken, B.; Derrien, T.; Diekhans, M.; Harte, R.; Howald, C.; Kokocinski, F.; Lin, M.; Tress, M.; Van Baren, M.; Barnes, I.; Hunt, T.; Carvalho-Silva, D.; Davidson, C.; Donaldson, S.; Gilbert, J.; Kay, M.; Lloyd, D.; Loveland, J.; Mudge, J.; Snow, C.; Vamathevan, J.; Wilming, L.; Brent, M.; Gerstein, M.; Guigo, R.; Kellis, M.; Reymond, A.; Zadissa, A.; Valencia, A.; Harrow, J.; Hubbard, T.
IF9.4
Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens
BMC GENOMICS
2009-07-07
101
OAAI
Wilkinson, Paul; Waterfield, Nicholas R.; Crossman, Lisa; Corton, Craig; Sanchez-Contreras, Maria; Vlisidou, Isabella; Barron, Andrew; Bignell, Alexandra; Clark, Louise; Ormond, Douglas; Mayho, Matthew; Bason, Nathalie; Smith, Frances; Simmonds, Mark; Churcher, Carol; Harris, David; Thompson, Nicholas R.; Quail, Michael; Parkhill, Julian; Ffrench-Constant, Richard H.
IF3.7
Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain
BMC GENOMICS
2009-05-21
133
OAAI
Seth-Smith, Helena M. B.; Harris, Simon R.; Persson, Kenneth; Marsh, Pete; Barron, Andrew; Bignell, Alexandra; Bjartling, Carina; Clark, Louise; Cutcliffe, Lesley T.; Lambden, Paul R.; Lennard, Nicola; Lockey, Sarah J.; Quail, Michael A.; Salim, Omar; Skilton, Rachel J.; Wang, Yibing; Holland, Martin J.; Parkhill, Julian; Thomson, Nicholas R.; Clarke, Ian N.
IF3.7
Evidence for niche adaptation in the genome of the bovine pathogen Streptococcus uberis
BMC GENOMICS
2009-01-28
368
OAAI
Ward, Philip N.; Holden, Matthew T. G.; Leigh, James A.; Lennard, Nicola; Bignell, Alexandra; Barron, Andy; Clark, Louise; Quail, Michael A.; Woodward, John; Barrell, Bart G.; Egan, Sharon A.; Field, Terence R.; Maskell, Duncan; Kehoe, Michael; Dowson, Christopher G.; Chanter, Neil; Whatmore, Adrian M.; Bentley, Stephen D.; Parkhill, Julian
IF3.7
Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa
GENOME RESEARCH
2008-12-01
812
OAAI
Winstanley, Craig; Langille, Morgan G. I.; Fothergill, Joanne L.; Kukavica-Ibrulj, Irena; Paradis-Bleau, Catherine; Sanschagrin, Francois; Thomson, Nicholas R.; Winsor, Geoff L.; Quail, Michael A.; Lennard, Nicola; Bignell, Alexandra; Clarke, Louise; Seeger, Kathy; Saunders, David; Harris, David; Parkhill, Julian; Hancock, Robert E. W.; Brinkman, Fiona S. L.; Levesque, Roger C.
IF5.5
Research Directions
No research directions

