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M

Martin Karplus

Harvard University
H-index:167
Citation Count:15.4万
Views:0

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Computational Design and Expression of Headless Influenza Hemagglutinin Antigens Toward a Modular Universal Nanoparticle Vaccine

无头流感血凝素抗原的计算设计与表达：一种模块化通用纳米颗粒疫苗的开发

Antibodies
IF2.7
2026-07-290
OA
Victor Ovchinnikov; Martin Karplus
Phenomenological Modeling of Antibody Response from Vaccine Strain Composition
ANTIBODIES
IF2.7
2025-01-160
OAAI
Ovchinnikov, Victor; Karplus, Martin
High-throughput molecular simulations of SARS-CoV-2 receptor binding domain mutants quantify correlations between dynamic fluctuations and protein expression
JOURNAL OF COMPUTATIONAL CHEMISTRY
IF4.8
2024-10-151
PRE
Ovchinnikov, Victor; Karplus, Martin
Water dynamics around T0 vs R4 of hemoglobin from local hydrophobicity analysis
JOURNAL OF CHEMICAL PHYSICS
IF3.1
2023-01-102
OA
Salehi, Seyedeh Maryam; Pezzella, Marco; Willard, Adam; Meuwly, Markus; Karplus, Martin
ppdx: Automated modeling of protein-protein interaction descriptors for use with machine learning

ppdx: 用于机器学习的蛋白质-蛋白质相互作用描述符的自动建模

JOURNAL OF COMPUTATIONAL CHEMISTRY
IF4.8
2022-08-056
OA
Conti, Simone; Ovchinnikov, Victor; Karplus, Martin
The functional role of the hemoglobin-water interface
MOLECULAR ASPECTS OF MEDICINE
IF10.3
2022-04-012
OAAI
Meuwly, Markus; Karplus, Martin
A Coarse-Grained Model of Affinity Maturation Indicates the Importance of B-Cell Receptor Avidity in Epitope Subdominance
FRONTIERS IN IMMUNOLOGY
IF5.9
2022-03-182
OAAI
Ovchinnikov, Victor; Karplus, Martin
Design of immunogens to elicit broadly neutralizing antibodies against HIV targeting the CD4 binding site

设计免疫原以激发针对CD4结合位点的HIV的广泛中和抗体

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
2021-02-267
OA
Conti, Simone; Kaczorowski, Kevin J.; Song, Ge; Porter, Katelyn; Andrabi, Raiees; Burton, Dennis R.; Chakraborty, Arup K.; Karplus, Martin
A restrained locally enhanced sampling method (RLES) for finding free energy minima in complex systems
JOURNAL OF CHEMICAL PHYSICS
IF3.1
2020-09-241
OAAI
Ovchinnikov, Victor; Conti, Simone; Karplus, Martin
The trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase
NATURE COMMUNICATIONS
IF15.7
2020-09-0725
OAAI
Shigdel, Uddhav K.; Ovchinnikov, Victor; Lee, Seung-Joo; Shih, Jenny A.; Karplus, Martin; Nam, Kwangho; Verdine, Gregory L.
Microsecond Molecular Dynamics Simulations of Proteins Using a Quasi-Equilibrium Solvation Shell Model
JOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
2020-02-117
PREAI
Ovchinnikov, Victor; Conti, Simone; Lau, Edmond Y.; Lightstone, Felice C.; Karplus, Martin
Structural basis for power stroke vs. Brownian ratchet mechanisms of motor proteins
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
2019-09-1093
OAAI
Hwang, Wonmuk; Karplus, Martin
Insights into the origin of the high energy-conversion efficiency of F1-ATPase
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
2019-07-2412
OAAI
Nam, Kwangho; Karplus, Martin
Response to comment on 'Valid molecular dynamics simulations of human hemoglobin require a surprisingly large box size'
ELIFE
IF0
2019-06-2014
OAAI
El Hage, Krystel; Hedin, Florent; Gupta, Prashant K.; Meuwly, Markus; Karplus, Martin
Structure of the EmrE multidrug transporter and its use for inhibitor peptide design
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
2018-08-0640
OAAI
Ovchinnikov, Victor; Stone, Tracy A.; Deber, Charles M.; Karplus, Martin
Valid molecular dynamics simulations of human hemoglobin require a surprisingly large box size
ELIFE
IF0
2018-07-1270
OAAI
El Hage, Krystel; Hedin, Florent; Gupta, Prashant K.; Meuwly, Markus; Karplus, Martin
Role of framework mutations and antibody flexibility in the evolution of broadly neutralizing antibodies
ELIFE
IF0
2018-02-1478
OAAI
Ovchinnikov, Victor; Louveau, Joy E.; Barton, John P.; Karplus, Martin; Chakraborty, Arup K.
Kinesin motility is driven by subdomain dynamics
ELIFE
IF0
2017-11-0740
OAAI
Hwang, Wonmuk; Lang, Matthew J.; Karplus, Martin
Exploratory search during directed navigation in C. elegans and Drosophila larva
ELIFE
IF0
2017-10-3021
OA
Klein, Mason; Krivov, Sergei V.; Ferrer, Anggie J.; Luo, Linjiao; Samuel, Aravinthan D. T.; Karplus, Martin
Trapping the ATP binding state leads to a detailed understanding of the F1-ATPase mechanism
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
2014-12-0150
OAAI
Nam, Kwangho; Pu, Jingzhi; Karplus, Martin

Research Directions

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M
Markus Meuwly
H-index:49Papers:501Citations:1.0万
V
Victor Ovchinnikov
H-index:18Papers:57Citations:1.0万
K
Kwangho Nam
H-index:30Papers:95Citations:2,973
A
Aaron R. Dinner
H-index:56Papers:334Citations:2.1万
E
Emanuele Paci
H-index:45Papers:169Citations:1.6万
Q
Qiang Cui
H-index:81Papers:766Citations:3.0万
G
Gregory L. Verdine
H-index:78Papers:318Citations:2.5万
W
Wei Yang
H-index:39Papers:119Citations:1.4万
马
马剑鹏
H-index:50Papers:195Citations:2.0万
S
Sung‐Sau So
H-index:21Papers:58Citations:2,376