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Pedro Alexandrino Fernandes

universidade do porto

58H-index
1.3KPaper Count
1.5WCitation Count
Published Papers 87
Publication Date
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Mechanism of Polyester Hydrolysis by Marine Bacterium PE-H Enzyme: an Atomistic and Thermodynamic Characterization
errJournal of Chemical Information and Modeling
IF5.3
err2026-02-01
err0
PREAI
errNassir, Samah; Paiva, Pedro; Neves, Rui P. P.; Fernandes, Pedro A.; El Allali, Achraf; Ramos, Maria J.
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Mechanistic Insights into NOBA Hydrolysis by Viper Venom Secreted Phospholipase A2
errBiochimie
IF3
err2025-12-05
err0
errOAAI
errAna Rita Calixto; Roberto Pinto; Maciej Spiegel; Maria João Ramos; Pedro Alexandrino Fernandes
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errSave
Revealing the rationale behind the differential neutralization of phospholipase A2 (PLA2) enzymes in snake and bee venom by varespladib (LY-315920), a small molecule PLA2 inhibitor
errJOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
IF2.4
err2025-11-01
err5
PREAI
errKumar, Rahul; Patra, Aparup; Das, Dorothy; Saikia, Kangkon; da Silva, Joana R.; Ramos, Maria J.; Khan, Mojibur R.; Fernandes, Pedro A.; Mukherjee, Ashis K.
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Molecular dynamics of Lys49 PLA2-like toxins: Insights into solution and membrane-bound conformations
errToxicon
IF2.4
err2025-09-11
err0
errOAAI
errRui Rachão; João T.S. Coimbra; Maria J. Ramos; José-María Gutiérrez; Bruno Lomonte; Pedro A. Fernandes
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errSave
Unveiling the Power of Computational Tools in Chiral Liquid Chromatography
errmolecules
IF0
err2025-08-02
err0
errOAAI
errRita Lima; Rui P. P. Neves; Pedro A. Fernandes; Artur M. S. Silva; Carla Fernandes
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errSave
Reaction Mechanism and Catalytic Determinants of a Highly Active De Novo Metalloesterase
errACS CATALYSIS
IF13.1
err2025-05-14
err0
PREAI
errTeixeira, LMC; Coimbra, JTS; Ramos, MJ; Hilvert, D; Fernandes, PA
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Measuring catalytic mechanism similarity - a new approach to study enzyme function and evolution
errFEBS JOURNAL
IF4.2
err2025-04-22
err0
PREAI
errAntonio J. M. Ribeiro; Ioannis G. Riziotis; Neera Borkakoti; Pedro A. Fernandes; Maria J. Ramos; Janet M. Thornton
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errSave
Binding Affinity of Synthetic Cannabinoids to Human Serum Albumin: Site Characterization and Interaction Insights
errPHARMACEUTICALS
IF4.8
err2025-04-16
err0
errOAAI
errSantos, Rita M. G.; Lima, Rita; Cravo, Sara; Fernandes, Pedro Alexandrino; Remiao, Fernando; Fernandes, Carla
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Snake Venom-Inspired Novel Peptides Protect Caenorhabditis elegans against Paraquat-Induced Parkinson's Pathology
errACS CHEMICAL NEUROSCIENCE
IF3.9
err2025-03-17
err0
PREAI
errMadhubala, D; Mahato, R; Saikia, K; Patra, A; Fernandes, PA; Kumar, A; Khan, MR; Mukherjee, AK
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Structure-Guided Engineering of a Versatile Urethanase Improves Its Polyurethane Depolymerization Activity
errADVANCED SCIENCE
IF0
err2025-02-07
err1
errOAAI
errLi, ZS; Han, X; Cong, L; Singh, P; Paiva, P; Branson, Y; Li, WS; Chen, YY; Jaradat, DMM; Lennartz, F; Bayer, T; Schmidt, L; Garscha, U; You, S; Fernandes, PA; Ramos, MJ; Bornscheuer, UT; Weber, G; Wei, R; Liu, WD
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errSave
Unveiling the enzymatic pathway of UMG-SP2 urethanase: insights into polyurethane degradation at the atomic level
errChemical Science
IF7.4
err2025-01-01
err1
PREAI
errP. Paiva; L. M. C. Teixeira; R. Wei; W. Liu; G. Weber; J. P. Morth; P. Westh; A. R. Petersen; M. B. Johansen; A. Sommerfeldt; A. Sandahl; D. E. Otzen; P. A. Fernandes; M. J. Ramos
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errSave
Beyond Fang's fury: a computational study of the enzyme-membrane interaction and catalytic pathway of the snake venom phospholipase A2 toxin
errCHEMICAL SCIENCE
IF7.4
err2025-01-01
err0
errOAAI
errCastro-Amorim, Juliana; Pinto, Alexandre V.; Mukherjee, Ashis K.; Ramos, Maria J.; Fernandes, Pedro A.
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errSave
Atomistic adsorption of PETase onto large-scale PET 3D-models that mimic reality
errPHYSICAL CHEMISTRY CHEMICAL PHYSICS
IF2.9
err2025-01-01
err0
PREAI
errPaiva, P.; Ippoliti, E.; Carloni, P.; Fernandes, P. A.
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errSave
Structural and Functional Characterization of an Amidase Targeting a Polyurethane for Sustainable Recycling
errANGEWANDTE CHEMIE-INTERNATIONAL EDITION
IF16.9
err2024-12-20
err0
PREAI
errRotilio, Laura; Bayer, Thomas; Meinert, Hannes; Teixeira, Luis M. C.; Johansen, Martin B.; Sommerfeldt, Andreas; Petersen, Allan R.; Sandahl, Alexander; Keller, Malene B.; Holck, Jesper; Paiva, Pedro; Otzen, Daniel E.; Bornscheuer, Uwe T.; Wei, Ren; Fernandes, Pedro A.; Ramos, Maria J.; Westh, Peter; Morth, J. Preben
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errSave
The Kinetics of Carbon-Carbon Bond Formation in Metazoan Fatty Acid Synthase and Its Impact on Product Fidelity
errANGEWANDTE CHEMIE-INTERNATIONAL EDITION
IF16.9
err2024-12-04
err0
errOAAI
errGusenda, Christian; Calixto, Ana R.; Da Silva, Joana R.; Fernandes, Pedro A.; Grininger, Martin
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Venomous Peptides: Molecular Origin of the Toxicity of Snake Venom PLA2-like Peptides
errJACS AU
IF8.7
err2024-10-22
err0
errOAAI
errCoimbra, JoaoT. S.; Gissler, Antoine; Nitor, Emiel; Rostamipour, Kiana; Cunha, Ana V.; Ramos, Maria J.; Fernandes, Pedro A.
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errSave
The Catalytic Mechanism of Decarboxylation of L-DOPA to Dopamine by Papaver somniferum Aromatic Amino Acid Decarboxylase - A Computational Study
errCHEMCATCHEM
IF3.9
err2024-09-28
err0
PREAI
errSousa, Joao P. M.; Ramos, Maria J.; Fernandes, Pedro A.
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Binding studies of promethazine and its metabolites with human serum albumin by high-performance affinity chromatography and molecular docking in the presence of codeine
errANALYTICAL AND BIOANALYTICAL CHEMISTRY
IF3.8
err2024-07-04
err1
errOAAI
errCoelho, Maria Miguel; Lima, Rita; Almeida, Ana Sofia; Fernandes, Pedro Alexandrino; Remiao, Fernando; Fernandes, Carla; Tiritan, Maria Elizabeth
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de Oliveira et al. Viper Venom Phospholipase A2 Database: The Structural and Functional Anatomy of a Primary Toxin in Envenomation (vol 16, pg 17, 2024)
errTOXINS
IF4
err2024-05-28
err0
errOAAI
errde Oliveira, Ana L. Novo; Lacerda, Miguel T.; Ramos, Maria J.; Fernandes, Pedro A.
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DszA Catalyzes C-S Bond Cleavage through N5-Hydroperoxyl Formation
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2024-04-29
err3
errOAAI
errFerreira, Pedro; Neves, Rui P. P.; Miranda, Filipa P.; Cunha, Ana V.; Havenith, Remco W. A.; Ramos, Maria J.; Fernandes, Pedro A.
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Research Directions

No research directions
Co-authors
Cooperation Journals
J
Janet M. Thornton
H-index: 135 · Papers: 784
F
Félix Carvalho
H-index: 104 · Papers: 780
J
José Marı́a Gutiérrez
H-index: 101 · Papers: 866
U
Uwe T. Bornscheuer
H-index: 95 · Papers: 886
E
Eduarda Fernandes
H-index: 91 · Papers: 453
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