Not logged in Identification of gene expression differences between primary pediatric tumors and their PDX models Pfeil, Jacob J.; Lee, Alex G.; Sayles, Leanne C.; Kephart, Ellen T.; Beale, Holly C.; Sanders, Lauren M.; Morozova, Olena; Salama, Sofie R.; Sweet-Cordero, Alejandro; Haussler, David Share Save
A Distinct DNA Methylation Shift in a Subset of Glioma CpG Island Methylator Phenotypes during Tumor Recurrence de Souza, Camila Ferreira; Sabedot, Thais S.; Malta, Tathiane M.; Stetson, Lindsay; Morozova, Olena; Sokolov, Artem; Laird, Peter W.; Wiznerowicz, Maciej; Iavarone, Antonio; Snyder, James; deCarvalho, Ana; Sanborn, Zachary; McDonald, Kerrie L.; Friedman, William A.; Tirapelli, Daniela; Poisson, Laila; Mikkelsen, Tom; Carlotti, Carlos G., Jr.; Kalkanis, Steven; Zenklusen, Jean; Salama, Sofie R.; Barnholtz-Sloan, Jill S.; Noushmehr, Houtan Share Save
TumorMap: Exploring the Molecular Similarities of Cancer Samples in an Interactive Portal Newton, Yulia; Novak, Adam M.; Swatloski, Teresa; McColl, Duncan C.; Chopra, Sahil; Graim, Kiley; Weinstein, Alana S.; Baertsch, Robert; Salama, Sofie R.; Ellrott, Kyle; Chopra, Manu; Goldstein, Theodore C.; Haussler, David; Morozova, Olena; Stuart, Joshua M. Share Save
A pan-cancer analysis framework for incorporating gene expression information into clinical interpretation of pediatric cancer genomic data Morozova, Olena; Newton, Yulia; Shah, Avanthi Tayi; Beale, Holly; Lam, Du Linh; Vivian, John; Bjork, Isabel; Goldstein, Theodore; Stuart, Josh; Salama, Sofie; Sweet-Cordero, E. Alejandro; Haussler, David Share Save
Identifying confidently measured genes in single pediatric cancer patient samples using RNA sequencing Beale, Holly; Du Linh Lam; Vivian, John; Newton, Yulia; Shah, Avanthi Tayi; Bjork, Isabel; Goldstein, Ted; Brooks, Angela N.; Stuart, Josh; Salama, Sofie; Sweet-Cordero, E. Alejandro; Haussler, David; Morozova, Olena Share Save
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Harnessing the power of big data to advance pediatric cancer care Morozova, Olena; Newton, Yulia; Cline, Melissa; Yip, Stephen; Rao, Arjun; Stuart, Josh; Goldstein, Ted; Salama, Sofie; Deyell, Rebecca; Rassekh, S. Rod; Haussler, David Share Save
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Comprehensive Pan-Genomic characterization of adrenocortical carcinoma Zheng, Siyuan; Cherniack, Andrew D.; Dewal, Ninad; Moffitt, Richard A.; Danilova, Ludmila; Murray, Bradley A.; Lerario, Antonio M.; Else, Tobias; Knijnenburg, Theo A.; Ciriello, Giovanni; Kim, Seungchan; Assie, Guillaume; Morozova, Olena; Akbani, Rehan; Shih, Juliann; Hoadley, Katherine A.; Choueiri, Toni K.; Waldmann, Jens; Mete, Ozgur; Robertson, Gordon A.; Meyerson, Matthew; Demeure, Michael J.; Beuschlein, Felix; Gill, Anthony; Latronico, Ana C.; Fragosa, Maria C.; Cope, Leslie; Kebebew, Electron; Habra, Mouhammed A.; Whitsett, Timothy G.; Bussey, Kimberly J.; Rainey, William E.; Asa, Sylvia; Bertherat, Jerome; Fassnacht, Martin; Wheeler, David A.; Hammer, Gary D.; Giordano, Thomas J.; Verhaak, Roel Share Save
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Recurrent activating ACVR1 mutations in diffuse intrinsic pontine glioma Taylor, Kathryn R.; Mackay, Alan; Truffaux, Nathalene; Butterfield, Yaron S.; Morozova, Olena; Philippe, Cathy; Castel, David; Grasso, Catherine S.; Vinci, Maria; Carvalho, Diana; Carcaboso, Angel M.; de Torres, Carmen; Cruz, Ofelia; Mora, Jaume; Entz-Werle, Natacha; Ingram, Wendy J.; Monje, Michelle; Hargrave, Darren; Bullock, Alex N.; Puget, Stephanie; Yip, Stephen; Jones, Chris; Grill, Jacques Share Save
Rare DNA variants are enriched at the BARD1 locus and likely influence neuroblastoma susceptibility Wood, Andrew C.; Pugh, Trevor J.; Morozova, Olena; Koster, Jan; Molenaar, Jan J.; Pineros, Vanessa; Bosse, Kristopher R.; Perin, Juan C.; Diskin, Sharon; Diamond, Maura A.; Marra, Marco; Meyerson, Matthew; Versteeg, Rogier; Maris, John M. Share Save
A Cancer Stem Cell Model for Studying Brain Metastases From Primary Lung Cancer Nolte, Sara M.; Venugopal, Chitra; McFarlane, Nicole; Morozova, Olena; Hallett, Robin M.; O'Farrell, Erin; Manoranjan, Branavan; Murty, Naresh K.; Klurfan, Paula; Kachur, Edward; Provias, John P.; Farrokhyar, Forough; Hassell, John A.; Marra, Marco; Singh, Sheila K. Share Save
Cell culture and Drosophila model systems define three classes of anaplastic lymphoma kinase mutations in neuroblastoma Chand, Damini; Yamazaki, Yasuo; Ruuth, Kristina; Schonherr, Christina; Martinsson, Tommy; Kogner, Per; Attiyeh, Edward F.; Maris, John; Morozova, Olena; Marra, Marco A.; Ohira, Miki; Nakagawara, Akira; Sandstrom, Per-Erik; Palmer, Ruth H.; Hallberg, Bengt Share Save
DNA hypermethylation and 1p Loss silence NHE-1 in oligodendroglioma Blough, Michael D.; Al-Najjar, Mohammad; Chesnelong, Charles; Binding, Carmen E.; Rogers, Alexandra D.; Luchman, H. Artee; Kelly, John J.; Fliegel, Larry; Morozova, Olena; Yip, Stephen; Marra, Marco; Weiss, Samuel; Chan, Jennifer A.; Cairncross, J. Gregory Share Save
Penetrance of biallelic SMARCAL1 mutations is associated with environmental and genetic disturbances of gene expression Baradaran-Heravi, Alireza; Cho, Kyoung Sang; Tolhuis, Bas; Sanyal, Mrinmoy; Morozova, Olena; Morimoto, Marie; Elizondo, Leah I.; Bridgewater, Darren; Lubieniecka, Joanna; Beirnes, Kimberly; Myung, Clara; Leung, Danny; Fam, Hok Khim; Choi, Kunho; Huang, Yan; Dionis, Kira Y.; Zonana, Jonathan; Keller, Kory; Stenzel, Peter; Mayfield, Christy; Luecke, Thomas; Bokenkamp, Arend; Marra, Marco A.; van Lohuizen, Maarten; Lewis, David B.; Shaw, Chad; Boerkoel, Cornelius F. Share Save
Concurrent CIC mutations, IDH mutations, and 1p/19q loss distinguish oligodendrogliomas from other cancers Yip, Stephen; Butterfield, Yaron S.; Morozova, Olena; Chittaranjan, Suganthi; Blough, Michael D.; An, Jianghong; Birol, Inanc; Chesnelong, Charles; Chiu, Readman; Chuah, Eric; Corbett, Richard; Docking, Rod; Firme, Marlo; Hirst, Martin; Jackman, Shaun; Karsan, Aly; Li, Haiyan; Louis, David N.; Maslova, Alexandra; Moore, Richard; Moradian, Annie; Mungall, Karen L.; Perizzolo, Marco; Qian, Jenny; Roldan, Gloria; Smith, Eric E.; Tamura-Wells, Jessica; Thiessen, Nina; Varhol, Richard; Weiss, Samuel; Wu, Wei; Young, Sean; Zhao, Yongjun; Mungall, Andrew J.; Jones, Steven J. M.; Morin, Gregg B.; Chan, Jennifer A.; Cairncross, J. Gregory; Marra, Marco A. Share Save
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