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Joanna Achinger-Kawecka

Garvan Institute of Medical Research

14H-index
24Paper Count
1.1KCitation Count
Published Papers 16
Publication Date
Interplay of the 3D genome and epigenome in androgen-driven prostate cancer
err2026-05-22
err0
errOAAI
errElyssa M. Campbell; Dayna Challis; Susan J. Clark; Joanna Achinger-Kawecka
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PPARγ acetylation governs mammary adenocarcinoma tumor growth via acetylated residues that determine DNA sequence-specific binding
err2025-07-26
err0
errOAAI
errLifeng Tian; Xuanmao Jiao; Chenguang Wang; Danni Li; Adam Ertel; Joanna Achinger-Kawecka; Sankar Addya; Raymond E. Soccio; Eric R. Chen; Balázs Győrffy; Gabriele Di Sante; Zhijiu Zhong; Haidar Alkhafaji; Nina Entcheva; Elyssa M. Campbell; Peter A. McCue; Andrew V. Kossenkov; Rita Pancsa; Peter Tompa; Susan J. Clark; Richard G. Pestell
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Machine learning enables pan-cancer identification of mutational hotspots at persistent CTCF binding sites
err2024-07-02
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errOAAI
errChen, Wenhan; Zeng, Yi C.; Achinger-Kawecka, Joanna; Campbell, Elyssa; Jones, Alicia K.; Stewart, Alastair G.; Khoury, Amanda; Clark, Susan J.
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PPAR gamma acetylation governs mammary adenocarcinoma tumor growth via acetylated residues that determine DNA sequence-specific binding
err2024-03-22
err0
PREAI
errTian, LIfeng; Jiao, Xuanmao; Wang, Chenguang; Ertel, Adam; Soccio, Raymond; Chen, Eric R.; Gyorffy, Balazs; Di Sante, Gabriele; Zhong, Zhijiu; Addya, Sankar; Mccue, Peter A.; Kossenkov, Andrew V.; Achinger-Kawecka, Joanna; Clark, Susan; Pestell, Richard G.
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Characterisation and reproducibility of the HumanMethylationEPIC v2.0 BeadChip for DNA methylation profiling
err2024-03-06
err6
errOAAI
errPeters, Timothy J.; Meyer, Braydon; Ryan, Lauren; Achinger-Kawecka, Joanna; Song, Jenny; Campbell, Elyssa M.; Qu, Wenjia; Nair, Shalima; Loi-Luu, Phuc; Stricker, Phillip; Lim, Elgene; Stirzaker, Clare; Clark, Susan J.; Pidsley, Ruth
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The potential of epigenetic therapy to target the 3D epigenome in endocrine-resistant breast cancer
err2024-01-05
err5
errOAAI
errAchinger-Kawecka, Joanna; Stirzaker, Clare; Portman, Neil; Campbell, Elyssa; Chia, Kee-Ming; Du, Qian; Laven-Law, Geraldine; Nair, Shalima S.; Yong, Aliza; Wilkinson, Ashleigh; Clifton, Samuel; Milioli, Heloisa H.; Alexandrou, Sarah; Caldon, C. Elizabeth; Song, Jenny; Khoury, Amanda; Meyer, Braydon; Chen, Wenhan; Pidsley, Ruth; Qu, Wenjia; Gee, Julia M. W.; Schmitt, Anthony; Wong, Emily S.; Hickey, Theresa E.; Lim, Elgene; Clark, Susan J.
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The 2023 generation
err2023-12-15
err0
PREAI
errAchinger-Kawecka, Joanna; Correa, Santiago; Hu, Jing; Li, Gaopeng; Lindeboom, Rik G. H.; Misale, Sandra; Monkkonen, Teresa; Nirmal, Ajit J.; Prekovic, Stefan; Sinha, Sanju; Trigos, Anna S.; Watson, Caroline J.
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Memory of stochastic single-cell apoptotic signaling promotes chemoresistance in neuroblastoma
err2023-03-03
err8
errOAAI
errHastings, Jordan F.; Latham, Sharissa L.; Kamili, Alvin; Wheatley, Madeleine S.; Han, Jeremy Z. R.; Wong-Erasmus, Marie; Phimmachanh, Monica; Nobis, Max; Pantarelli, Chiara; Cadell, Antonia L.; O'Donnell, Yolande E. I.; Leong, King Ho; Lynn, Sophie; Geng, Fan-Suo; Cui, Lujing; Yan, Sabrina; Achinger-Kawecka, Joanna; Stirzaker, Clare; Norris, Murray D.; Haber, Michelle; Trahair, Toby N.; Speleman, Frank; De Preter, Katleen; Cowley, Mark J.; Bogdanovic, Ozren; Timpson, Paul; Cox, Thomas R.; Kolch, Walter; Fletcher, Jamie I.; Fey, Dirk; Croucher, David R.
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DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity
err2021-09-01
err35
errOAAI
errDu, Qian; Smith, Grady C.; Phuc Loi Luu; Ferguson, James M.; Armstrong, Nicola J.; Caldon, C. Elizabeth; Campbell, Elyssa M.; Nair, Shalima S.; Zotenko, Elena; Gould, Cathryn M.; Buckley, Michael; Chia, Kee-Ming; Portman, Neil; Lim, Elgene; Kaczorowski, Dominik; Chan, Chia-Ling; Barton, Kirston; Deveson, Ira W.; Smith, Martin A.; Powell, Joseph E.; Skvortsova, Ksenia; Stirzaker, Clare; Achinger-Kawecka, Joanna; Clark, Susan J.
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BRG1 knockdown inhibits proliferation through multiple cellular pathways in prostate cancer
err2021-02-17
err16
errOAAI
errGiles, Katherine A.; Gould, Cathryn M.; Achinger-Kawecka, Joanna; Page, Scott G.; Kafer, Georgia R.; Rogers, Samuel; Luu, Phuc-Loi; Cesare, Anthony J.; Clark, Susan J.; Taberlay, Phillippa C.
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Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine-resistant breast cancer
err2020-01-16
err103
errOAAI
errAchinger-Kawecka, Joanna; Valdes-Mora, Fatima; Luu, Phuc-Loi; Giles, Katherine A.; Caldon, C. Elizabeth; Qu, Wenjia; Nair, Shalima; Soto, Sebastian; Locke, Warwick J.; Yeo-Teh, Nicole S.; Gould, Cathryn M.; Du, Qian; Smith, Grady C.; Ramos, Irene R.; Fernandez, Kristine F.; Hoon, Dave S.; Gee, Julia M. W.; Stirzaker, Clare; Clark, Susan J.
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Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains
err2020-01-07
err83
errOAAI
errKhoury, Amanda; Achinger-Kawecka, Joanna; Bert, Saul A.; Smith, Grady C.; French, Hugh J.; Luu, Phuc-Loi; Peters, Timothy J.; Du, Qian; Parry, Aled J.; Valdes-Mora, Fatima; Taberlay, Phillippa C.; Stirzaker, Clare; Statham, Aaron L.; Clark, Susan J.
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Integrated epigenomic analysis stratifies chromatin remodellers into distinct functional groups
err2019-02-12
err23
errOAAI
errGiles, Katherine A.; Gould, Cathryn M.; Du, Qian; Skvortsova, Ksenia; Song, Jenny Z.; Maddugoda, Madhavi P.; Achinger-Kawecka, Joanna; Stirzaker, Clare; Clark, Susan J.; Taberlay, Phillippa C.
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Disruption of the 3D cancer genome blueprint
err2016-12-12
err42
errOAAI
errAchinger-Kawecka, Joanna; Clark, Susan J.
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Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations
err2016-04-06
err261
errOAAI
errTaberlay, Phillippa C.; Achinger-Kawecka, Joanna; Lun, Aaron T. L.; Buske, Fabian A.; Sabir, Kenneth; Gould, Cathryn M.; Zotenko, Elena; Bert, Saul A.; Giles, Katherine A.; Bauer, Denis C.; Smyth, Gordon K.; Stirzaker, Clare; O'Donoghue, Sean I.; Clark, Susan J.
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Increased expression of miR-126 and miR-10a predict prolonged relapse-free time of primary oestrogen receptor-positive breast cancer following tamoxifen treatment
err2013-11-01
err79
PREAI
errHoppe, Reiner; Achinger-Kawecka, Joanna; Winter, Stefan; Fritz, Peter; Lo, Wing-Yee; Schroth, Werner; Brauch, Hiltrud
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