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Prabin Baral

Florida International University

11H-index
38Paper Count
518Citation Count
Published Papers 11
Publication Date
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EMoMiS: A pipeline for epitope-based molecular mimicry search in protein structures with potential applications to SARS-CoV-2
errComputational and Structural Biotechnology Journal
IF4.1
err2026-02-02
err0
errOAAI
errVitalii Stebliankin; Rajeshwari Chellappan; Prabin Baral; Christian Balbin; Janelle Nunez-Castilla; Masrur Sobhan; Trevor Cickovski; Ashleigh N. Riegler; Ananda Mohan Mondal; Jessica Siltberg-Liberles; Prem Chapagain; Sathibalan Ponniah; Sixto M. Leal; Kalai Mathee; Giri Narasimhan
errShare
errSave
Grand canonical Monte Carlo and deep learning assisted enhanced sampling to characterize the distribution of Mg2+ and influence of the Drude polarizable force field on the stability of folded states of the twister ribozyme
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2024-12-12
err0
PREAI
errBaral, Prabin; Sengul, Mert Y.; Mackerell Jr, Alexander D.
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errSave
Evaluating protein binding interfaces with transformer networks
errNATURE MACHINE INTELLIGENCE
IF23.9
err2023-09-07
err7
PREAI
errStebliankin, Vitalii; Shirali, Azam; Baral, Prabin; Shi, Jimeng; Chapagain, Prem; Mathee, Kalai; Narasimhan, Giri
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errSave
The oncogenic circular RNA circ_63706 is a potential therapeutic target in sonic hedgehog-subtype childhood medulloblastomas
errACTA NEUROPATHOLOGICA COMMUNICATIONS
IF5.7
err2023-03-10
err3
errOAAI
errKatsushima, Keisuke; Pokhrel, Rudramani; Mahmud, Iqbal; Yuan, Menglang; Murad, Rabi; Baral, Prabin; Zhou, Rui; Chapagain, Prem; Garrett, Timothy; Stapleton, Stacie; Jallo, George; Bettegowda, Chetan; Raabe, Eric; Wechsler-Reya, Robert J.; Eberhart, Charles G.; Perera, Ranjan J.
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errSave
Immunoinformatic screening of Marburgvirus epitopes and computational investigations of epitope-allele complexes
errINTERNATIONAL IMMUNOPHARMACOLOGY
IF4.7
err2022-10-01
err2
errOAAI
errBaral, Prabin; Pavadai, Elumalai; Zhou, Ziyou; Xu, Yang; Tison, Christopher K.; Pokhrel, Rudramani; Gerstman, Bernard S.; Chapagain, Prem P.
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errSave
Molecular Modeling and Simulation of the Peptidoglycan Layer of Gram-Positive Bacteria Staphylococcus aureus
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2022-08-18
err21
PREAI
errPokhrel, Rudramani; Shakya, Rojesh; Baral, Prabin; Chapagain, Prem
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errSave
Potential Autoimmunity Resulting from Molecular Mimicry between SARS-CoV-2 Spike and Human Proteins
errVIRUSES-BASEL
IF3.5
err2022-06-28
err47
errOAAI
errNunez-Castilla, Janelle; Stebliankin, Vitalii; Baral, Prabin; Balbin, Christian A.; Sobhan, Masrur; Cickovski, Trevor; Mondal, Ananda Mohan; Narasimhan, Giri; Chapagain, Prem; Mathee, Kalai; Siltberg-Liberles, Jessica
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errSave
Lipid II Binding and Transmembrane Properties of Various Antimicrobial Lanthipeptides
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2021-12-07
err7
PREAI
errPokhrel, Rudramani; Bhattarai, Nisha; Baral, Prabin; Gerstman, Bernard S.; Park, Jae H.; Handfield, Martin; Chapagain, Prem P.
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errSave
Ebola virus protein VP40 binding to Sec24c for transport to the plasma membrane
errPROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
IF2.8
err2021-09-03
err4
errOAAI
errBhattarai, Nisha; Pavadai, Elumalai; Pokhrel, Rudramani; Baral, Prabin; Hossen, Md Lokman; Stahelin, Robert V.; Chapagain, Prem P.; Gerstman, Bernard S.
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errSave
In-silico identification of the vaccine candidate epitopes against the Lassa virus hemorrhagic fever
errSCIENTIFIC REPORTS
IF3.9
err2020-05-06
err8
errOAAI
errBaral, Prabin; Pavadai, Elumalai; Gerstman, Bernard S.; Chapagain, Prem P.
errShare
errSave
Molecular Dynamics Investigations of Enzyme Conformational Changes
errBIOPHYSICAL JOURNAL
IF3.1
err2019-02-01
err0
PREAI
errBaral, Prabin; Bhattarai, Nisha; Pokhrel, Rudramani; Gerstman, Bernard; Chapagain, Prem P.
errShare
errSave

Research Directions

The data has not been retrieved yet.
Co-authors
Cooperation Journals
A
Alexander D. MacKerell
H-index: 107 · Papers: 771
C
Charles G. Eberhart
H-index: 102 · Papers: 1.0K
Y
Yang Xu
H-index: 70 · Papers: 426
C
Chetan Bettegowda
H-index: 69 · Papers: 748
G
George I. Jallo
H-index: 67 · Papers: 503
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