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Synaptic plasticity in human thalamocortical assembloids Patton, Mary H.; Thomas, Kristen T.; Bayazitov, Ildar T.; Newman, Kyle D.; Kurtz, Nathaniel B.; Robinson, Camenzind G.; Ramirez, Cody A.; Trevisan, Alexandra J.; Bikoff, Jay B.; Peters, Samuel T.; Pruett-Miller, Shondra M.; Jiang, Yanbo; Schild, Andrew B.; Nityanandam, Anjana; Zakharenko, Stanislav S. Share Save
Evolutionary conservation of VSX2 super-enhancer modules in retinal development Honnell, Victoria; Sweeney, Shannon; Norrie, Jackie; Parks, Madison; Ramirez, Cody; Jannu, Asha Jacob; Xu, Beisi; Teubner, Brett; Lee, Ah Young; Bell, Claire; Dyer, Michael A. Share Save
Mutations associated with progression in follicular lymphoma predict inferior outcomes at diagnosis: Alliance A151303 Russler-Germain, David A.; Krysiak, Kilannin; Ramirez, Cody; Mosior, Matthew; Watkins, Marcus P.; Gomez, Felicia; Skidmore, Zachary L.; Trani, Lee; Gao, Feng; Geyer, Susan; Cashen, Amanda F.; Mehta-Shah, Neha; Kahl, Brad S.; Bartlett, Nancy L.; Alderuccio, Juan P.; Lossos, Izidore S.; Ondrejka, Sarah L.; Hsi, Eric D.; Martin, Peter; Leonard, John P.; Griffith, Malachi; Griffith, Obi L.; Fehniger, Todd A. Share Save
Computational prediction of MHC anchor locations guides neoantigen identification and prioritization Xia, Huiming; McMichael, Joshua; Becker-Hapak, Michelle; Onyeador, Onyinyechi C.; Buchli, Rico; McClain, Ethan; Pence, Patrick; Supabphol, Suangson; Richters, Megan M.; Basu, Anamika; Ramirez, Cody A.; Puig-Saus, Cristina; Cotto, Kelsy C.; Freshour, Sharon L.; Hundal, Jasreet; Kiwala, Susanna; Goedegebuure, S. Peter; Johanns, Tanner M.; Dunn, Gavin P.; Ribas, Antoni; Miller, Christopher A.; Gillanders, William E.; Fehniger, Todd A.; Griffith, Obi L.; Griffith, Malachi Share Save
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Accurate neoantigen prediction depends on mutation position relative to patient-specific MHC anchor location Xia, Huiming; Richters, Megan M.; Ramirez, Cody A.; Puig-Saus, Cristina; Cotto, Kelsy C.; Dunn, Gavin P.; Fehniger, Todd; Ribas, Antoni; Gillanders, William E.; Griffith, Obi L.; Griffith, Malachi Share Save
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Standard operating procedure for somatic variant refinement of sequencing data with paired tumor and normal samples Barnell, Erica K.; Ronning, Peter; Campbell, Katie M.; Krysiak, Kilannin; Ainscough, Benjamin J.; Sheta, Lana M.; Pema, Shahil P.; Schmidt, Alina D.; Richters, Megan; Cotto, Kelsy C.; Danos, Arpad M.; Ramirez, Cody; Skidmore, Zachary L.; Spies, Nicholas C.; Hundal, Jasreet; Sediqzad, Malik S.; Kunisaki, Jason; Gomez, Felicia; Trani, Lee; Matlock, Matthew; Wagner, Alex H.; Swamidass, S. Joshua; Griffith, Malachi; Griffith, Obi L. Share Save
Expanding the CIViC variant to complex combinations of regions in the cancer genome Danos, Arpad; Krysiak, Kilannin; Wagner, Alex; Kiwala, Susanna; McMichael, Joshua; Coffman, Adam; Barnell, Erica; Feng, Yang-Yang; Ainscough, Benjamin; Ramirez, Cody; Griffith, Malachi; Griffith, Obi Share Save
Implementing evolving clinical standards in a variant interpretation knowledgebase Krysiak, Kilannin; Danos, Arpad M.; Wagner, Alex H.; Kiwala, Susanna; McMichael, Joshua F.; Coffman, Adam C.; Barnell, Erica K.; Feng, Yan-Yang; Ainscough, Benjamin J.; Ramirez, Cody A.; Griffith, Malachi; Griffith, Obi L. Share Save
Recurrent mutations and clinical outcomes in patients with follicular lymphoma Krysiak, Kilannin; Ramirez, Cody; Gomez, Felicia; Miller, Christopher A.; Fulton, Robert S.; Kreisel, Friederike; Cashen, Amanda F.; Bartlett, Nancy L.; Ruano, Ana; Hsi, Eric D.; Griffith, Malachi; Griffith, Obi L.; Fehniger, Todd A. Share Save
Deep exome sequencing reveals recurrent somatic mutations in Hodgkin's lymphoma Gomez, Felicia; Krysiak, Kilannin; Ramirez, Cody; Bartlett, Nancy; Cashen, Amanda; Kreisel, Friederike; Duncavage, Eric; Griffith, Malachi; Fehniger, Todd; Griffith, Obi Share Save
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