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J

Jonathan P. Lynch

The Pennsylvania State University

115H-index
396Paper Count
4.0WCitation Count
Published Papers 171
Publication Date
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Digging for meaningful connections: associations between root phenotypes and rhizosphere microbial diversity in maize
errPlant and Soil
IF4.1
err2026-07-11
err0
errOAAI
errElena Giuliano; Jagdeep Singh Sidhu; Ivan Lopez-Valdivia; Rafaela Feola Conz; Cody L. DePew; Jonathan P. Lynch; Johan Six; Martin Hartmann; Tania Galindo-Castañeda
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errSave
Shovelomics meets microbiomics: root phenotype-microbiome associations and links with maize yield under nitrogen limitation
errRhizosphere
IF3.5
err2025-12-03
err0
PREAI
errElena Giuliano; Jagdeep Singh Sidhu; Ivan Lopez-Valdivia; Rafaela Feola Conz; Cody DePew; Jonathan P. Lynch; Johan Six; Martin Hartmann; Tania Galindo-Castañeda
errShare
errSave
Broad environmental adaptation is associated with root anatomical phenotypes in maize landraces: an in silico study
errANNALS OF BOTANY
IF3.6
err2025-08-01
err0
errOAAI
errLopez-Valdivia, Ivan; Rangarajan, Harini; Vallebueno-Estrada, Miguel; Lynch, Jonathan P.
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errSave
In silico analysis of the evolution of root phenotypes during maize domestication in Neolithic soils of Tehuacán
errNew Phytologist
IF8.1
err2025-05-30
err0
errOAAI
errIvan Lopez-Valdivia; Miguel Vallebueno-Estrada; Harini Rangarajan; Kelly Swarts; Bruce F. Benz; Michael Blake; Jagdeep Singh Sidhu; Sergio Perez-Limon; Ruairidh J. H. Sawers; Hannah Schneider; Jonathan P. Lynch
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errSave
Did crop domestication change the fitness landscape of root response to soil mechanical impedance? An in silico analysis
errANNALS OF BOTANY
IF3.6
err2024-11-27
err0
errOAAI
errRangarajan, Harini; Lynch, Jonathan P.
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errSave
Does root respiration and root anatomical traits affect crop yield under stress? A meta-analysis and experimental study
errPLANT AND SOIL
IF4.1
err2024-08-12
err1
PREAI
errDu, Pengzhen; Lynch, Jonathan P.; Sun, Zhengli; Li, Feng-Min
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errSave
Integrating GWAS with a gene co-expression network better prioritizes candidate genes associated with root metaxylem phenes in maize
errPLANT GENOME
IF3.8
err2024-07-22
err0
errOAAI
errKlein, Stephanie P.; Kaeppler, Shawn M.; Brown, Kathleen M.; Lynch, Jonathan P.
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errSave
Cortical parenchyma wall width regulates root metabolic cost and maize performance under suboptimal water availability
errJOURNAL OF EXPERIMENTAL BOTANY
IF5.7
err2024-04-25
err1
errOAAI
errSidhu, Jagdeep Singh; Lopez-Valdivia, Ivan; Strock, Christopher F.; Schneider, Hannah M.; Lynch, Jonathan P.
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errSave
Root anatomy and biomechanical properties: improving predictions through root cortical and stele properties
errPLANT AND SOIL
IF4.1
err2024-02-13
err3
errOAAI
errMeijer, G. J.; Lynch, J. P.; Chimungu, J. G.; Loades, K. W.
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errSave
Cortical cell size regulates root metabolic cost
errPLANT JOURNAL
IF5.7
err2024-02-10
err3
errOAAI
errSidhu, Jagdeep Singh; Lynch, Jonathan P.
errShare
errSave
Location: root architecture structures rhizosphere microbial associations
errJOURNAL OF EXPERIMENTAL BOTANY
IF5.7
err2023-10-26
err18
errOAAI
errGalindo-Castaneda, Tania; Hartmann, Martin; Lynch, Jonathan P.
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errSave
A role for fermentation in aerobic conditions as revealed by computational analysis of maize root metabolism during growth by cell elongation
errPLANT JOURNAL
IF5.7
err2023-10-13
err3
errOAAI
errHunt, Hilary; Leape, Stefan; Sidhu, Jagdeep Singh; Ajmera, Ishan; Lynch, Jonathan P.; Ratcliffe, R. George; Sweetlove, Lee J.
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errSave
Root phenotypes for improved nitrogen capture
errPLANT AND SOIL
IF4.1
err2023-10-04
err16
errOAAI
errLynch, Jonathan P.; Galindo-Castaneda, Tania; Schneider, Hannah M.; Sidhu, Jagdeep Singh; Rangarajan, Harini; York, Larry M.
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errSave
Large root cortical cells and reduced cortical cell files improve growth under suboptimal nitrogen in silico
errPLANT PHYSIOLOGY
IF6.9
err2023-04-11
err10
errOAAI
errLopez-Valdivia, Ivan; Yang, Xiyu; Lynch, Jonathan P.
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errSave
Transcription factor bHLH121 regulates root cortical aerenchyma formation in maize
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-03-16
err18
errOAAI
errSchneider, Hannah M.; Lor, Vai S.; Zhang, Xia; Saengwilai, Patompong; Hanlon, Meredith T.; Klein, Stephanie P.; Davis, Jayne L.; Borkar, Aditi N.; Depew, Cody L.; Bennett, Malcolm J.; Kaeppler, Shawn M.; Brown, Kathleen M.; Bhosale, Rahul; Lynch, Jonathan P.
errShare
errSave
RootSlice-A novel functional-structural model for root anatomical phenotypes
errPLANT CELL AND ENVIRONMENT
IF6.3
err2023-02-09
err12
errOAAI
errSidhu, Jagdeep Singh; Ajmera, Ishan; Arya, Sankalp; Lynch, Jonathan P.
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errSave
In silico evidence for the utility of parsimonious root phenotypes for improved vegetative growth and carbon sequestration under drought
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2022-11-17
err8
errOAAI
errSchafer, Ernst D.; Ajmera, Ishan; Farcot, Etienne; Owen, Markus R.; Band, Leah R.; Lynch, Jonathan P.
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errSave
Response of Southeast Asian rice root architecture and anatomy phenotypes to drought stress
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2022-10-19
err3
errOAAI
errSiangliw, Jonaliza L.; Thunnom, Burin; Natividad, Mignon A.; Quintana, Marinell R.; Chebotarov, Dmytro; McNally, Kenneth L.; Lynch, Jonathan P.; Brown, Kathleen M.; Henry, Amelia
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errSave
Modeling root loss reveals impacts on nutrient uptake and crop development
errPLANT PHYSIOLOGY
IF6.9
err2022-09-01
err8
errOAAI
errSchafer, Ernst D.; Owen, Markus R.; Band, Leah R.; Farcot, Etienne; Bennett, Malcolm J.; Lynch, Jonathan P.
errShare
errSave
Many paths to one goal: Identifying integrated rice root phenotypes for diverse drought environments
errFRONTIERS IN PLANT SCIENCE
IF4.8
err2022-08-22
err8
errOAAI
errFonta, Jenna E.; Vejchasarn, Phanchita; Henry, Amelia; Lynch, Jonathan P.; Brown, Kathleen M.
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
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Mark Stitt
H-index: 150 · Papers: 577
J
Johan Six
H-index: 131 · Papers: 868
K
Kadambot H. M. Siddique
H-index: 129 · Papers: 1.4K
M
Malcolm J. Bennett
H-index: 127 · Papers: 798
S
Stephen P. Long
H-index: 123 · Papers: 574
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