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Patrick Hasenfeld

genome biology unit

13H-index
39Paper Count
1.7KCitation Count
Published Papers 13
Publication Date
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Recurrent DNA break clusters drive replication-stress-induced copy number variants and genome diversification
errNature Communications
IF15.7
err2026-04-20
err0
errOAAI
errLorenzo Corazzi; Alex Ing; Eva Benito; Marco Raffaele Cosenza; Patrick Hasenfeld; Thomas Weber; Anna J. M. Marx; Vivien S. Ionasz; Nathan Trausch; Sarah Benedetto; Giulia Di Muzio; Boyu Ding; Jana Berlanda; Marco Giaisi; Nina Claudino; Thomas Höfer; Jan O. Korbel; Pei-Chi Wei
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errSave
Population differences of chromosome 22q11.2 duplication structure predispose differentially to microdeletion and inversion
errNature Communications
IF15.7
err2026-04-18
err0
errOAAI
errDavid Porubsky; DongAhn Yoo; Nidhi Koundinya; Erika Souche; Philip C. Dishuck; Nicolas Dierckxsens; William T. Harvey; Katherine M. Munson; Kendra Hoekzema; Daniel D. Chan; Tiffany Y. Leung; Marta S. Santos; Senne Meynants; Ann Swillen; Jeroen Breckpot; Vasiliki Tsapalou; Patrick Hasenfeld; Jan O. Korbel; Peter M. Lansdorp; Joris R. Vermeesch; Evan E. Eichler
errShare
errSave
Origins of chromosome instability unveiled by coupled imaging and genomics
errNature
IF48.5
err2025-10-29
err0
errOAAI
errMarco Raffaele Cosenza; Alice Gaiatto; Büşra Erarslan Uysal; Álvaro Andrades; Nina Luisa Sautter; Marina Simunovic; Michael Adrian Jendrusch; Sonia Zumalave; Tobias Rausch; Aliaksandr Halavatyi; Eva-Maria Geissen; Joshua Lucas Eigenmann; Thomas Weber; Patrick Hasenfeld; Eva Benito; Catherine Stober; Isidro Cortes-Ciriano; Andreas E. Kulozik; Rainer Pepperkok; Jan O. Korbel
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errSave
Author Correction: Complex genetic variation in nearly complete human genomes
errNature
IF48.5
err2025-08-26
err0
errOAAI
errGlennis A. Logsdon; Peter Ebert; Peter A. Audano; Mark Loftus; David Porubsky; Jana Ebler; Feyza Yilmaz; Pille Hallast; Timofey Prodanov; DongAhn Yoo; Carolyn A. Paisie; William T. Harvey; Xuefang Zhao; Gianni V. Martino; Mir Henglin; Katherine M. Munson; Keon Rabbani; Chen-Shan Chin; Bida Gu; Hufsah Ashraf; Stephan Scholz; Olanrewaju Austine-Orimoloye; Parithi Balachandran; Marc Jan Bonder; Haoyu Cheng; Zechen Chong; Jonathan Crabtree; Mark Gerstein; Lisbeth A. Guethlein; Patrick Hasenfeld; Glenn Hickey; Kendra Hoekzema; Sarah E. Hunt; Matthew Jensen; Yunzhe Jiang; Sergey Koren; Youngjun Kwon; Chong Li; Heng Li; Jiaqi Li; Paul J. Norman; Keisuke K. Oshima; Benedict Paten; Adam M. Phillippy; Nicholas R. Pollock; Tobias Rausch; Mikko Rautiainen; Yuwei Song; Arda Söylev; Arvis Sulovari; Likhitha Surapaneni; Vasiliki Tsapalou; Weichen Zhou; Ying Zhou; Qihui Zhu; Michael C. Zody; Ryan E. Mills; Scott E. Devine; Xinghua Shi; Michael E. Talkowski; Mark J. P. Chaisson; Alexander T. Dilthey; Miriam K. Konkel; Jan O. Korbel; Charles Lee; Christine R. Beck; Evan E. Eichler; Tobias Marschall
errShare
errSave
Complex genetic variation in nearly complete human genomes
errNature
IF48.5
err2025-07-23
err0
errOAAI
errGlennis A. Logsdon; Peter Ebert; Peter A. Audano; Mark Loftus; David Porubsky; Jana Ebler; Feyza Yilmaz; Pille Hallast; Timofey Prodanov; DongAhn Yoo; Carolyn A. Paisie; William T. Harvey; Xuefang Zhao; Gianni V. Martino; Mir Henglin; Katherine M. Munson; Keon Rabbani; Chen-Shan Chin; Bida Gu; Hufsah Ashraf; Stephan Scholz; Olanrewaju Austine-Orimoloye; Parithi Balachandran; Marc Jan Bonder; Haoyu Cheng; Zechen Chong; Jonathan Crabtree; Mark Gerstein; Lisbeth A. Guethlein; Patrick Hasenfeld; Glenn Hickey; Kendra Hoekzema; Sarah E. Hunt; Matthew Jensen; Yunzhe Jiang; Sergey Koren; Youngjun Kwon; Chong Li; Heng Li; Jiaqi Li; Paul J. Norman; Keisuke K. Oshima; Benedict Paten; Adam M. Phillippy; Nicholas R. Pollock; Tobias Rausch; Mikko Rautiainen; Yuwei Song; Arda Söylev; Arvis Sulovari; Likhitha Surapaneni; Vasiliki Tsapalou; Weichen Zhou; Ying Zhou; Qihui Zhu; Michael C. Zody; Ryan E. Mills; Scott E. Devine; Xinghua Shi; Michael E. Talkowski; Mark J. P. Chaisson; Alexander T. Dilthey; Miriam K. Konkel; Jan O. Korbel; Charles Lee; Christine R. Beck; Evan E. Eichler; Tobias Marschall
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errSave
Structural variant and nucleosome occupancy dynamics postchemotherapy in a HER2+breast cancer organoid model
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2025-02-24
err0
errOAAI
errStarostecka, Maja; Jeong, Hyobin; Hasenfeld, Patrick; Garagorri, Eva Benito -; Christiansen, Tania; Brasseur, Catherine Stober; Queiroz, Maise Gomes; Montero, Marta Garcia; Jechlinger, Martin; Korbel, Jan O.
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errSave
Single-cell multiomics analysis reveals dynamic clonal evolution and targetable phenotypes in acute myeloid leukemia with complex karyotype
errNATURE GENETICS
IF31.8
err2024-11-25
err0
errOAAI
errLeppae, Aino-Maija; Grimes, Karen; Jeong, Hyobin; Huang, Frank Y.; Andrades, Alvaro; Waclawiczek, Alexander; Boch, Tobias; Jauch, Anna; Renders, Simon; Stelmach, Patrick; Mueller-Tidow, Carsten; Karpova, Darja; Sohn, Markus; Gruenschlaeger, Florian; Hasenfeld, Patrick; Benito Garagorri, Eva; Thiel, Vera; Dolnik, Anna; Rodriguez-Martin, Bernardo; Bullinger, Lars; Mrozek, Krzysztof; Eisfeld, Ann-Kathrin; Kraemer, Alwin; Sanders, Ashley D.; Korbel, Jan O.; Trumpp, Andreas
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errSave
Inverted triplications formed by iterative template switches generate structural variant diversity at genomic disorder loci
errCELL GENOMICS
IF9
err2024-07-01
err2
errOAAI
errGrochowski, Christopher M.; Bengtsson, Jesse D.; Du, Haowei; Gandhi, Mira; Lun, Ming Yin; Mehaffey, Michele G.; Park, KyungHee; Hoeps, Wolfram; Benito, Eva; Hasenfeld, Patrick; Korbel, Jan O.; Mahmoud, Medhat; Paulin, Luis F.; Jhangiani, Shalini N.; Hwang, James Paul; Bhamidipati, Sravya V.; Muzny, Donna M.; Fatih, Jawid M.; Gibbs, Richard A.; Pendleton, Matthew; Harrington, Eoghan; Juul, Sissel; Lindstrand, Anna; Sedlazeck, Fritz J.; Pehlivan, Davut; Lupski, James R.; Carvalho, Claudia M. B.
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errSave
Cell-type-specific consequences of mosaic structural variants in hematopoietic stem and progenitor cells
errNATURE GENETICS
IF31.8
err2024-05-28
err3
errOAAI
errGrimes, Karen; Jeong, Hyobin; Amoah, Amanda; Xu, Nuo; Niemann, Julian; Raeder, Benjamin; Hasenfeld, Patrick; Stober, Catherine; Rausch, Tobias; Benito, Eva; Jann, Johann-Christoph; Nowak, Daniel; Emini, Ramiz; Hoenicka, Markus; Liebold, Andreas; Ho, Anthony; Shuai, Shimin; Geiger, Hartmut; Sanders, Ashley D.; Korbel, Jan O.
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errSave
Gaps and complex structurally variant loci in phased genome assemblies
errGENOME RESEARCH
IF5.5
err2023-05-10
err19
errOAAI
errPorubsky, David R.; Vollger, Mitchell T.; Harvey, William N.; Rozanski, Allison; Ebert, Peter; Hickey, Glenn; Hasenfeld, Patrick D.; Sanders, Ashley; Stober, Catherine O.; Korbel, Jan; Paten, Benedict E.; Marschall, Tobias; Eichler, Evan
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errSave
Inversion polymorphism in a complete human genome assembly
errGENOME BIOLOGY
IF9.4
err2023-04-30
err11
errOAAI
errPorubsky, David N.; Harvey, William; Rozanski, Allison; Ebler, Jana; Hoeps, Wolfram; Ashraf, Hufsah; Hasenfeld, Patrick; Paten, Benedict; Sanders, Ashley D.; Marschall, Tobias; Korbel, Jan O.; Eichler, Evan E.
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errSave
Functional analysis of structural variants in single cells using Strand-seq
errNATURE BIOTECHNOLOGY
IF41.7
err2022-11-24
err16
errOAAI
errJeong, Hyobin; Grimes, Karen; Rauwolf, Kerstin K.; Bruch, Peter-Martin; Rausch, Tobias; Hasenfeld, Patrick; Benito, Eva; Roider, Tobias; Sabarinathan, Radhakrishnan; Porubsky, David; Herbst, Sophie A.; Erarslan-Uysal, Busra; Jann, Johann-Christoph; Marschall, Tobias; Nowak, Daniel; Bourquin, Jean-Pierre; Kulozik, Andreas E.; Dietrich, Sascha; Bornhauser, Beat; Sanders, Ashley D.; Korbel, Jan O.
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A high-resolution map of small-scale inversions in the gibbon genome
errGENOME RESEARCH
IF5.5
err2022-09-30
err3
errOAAI
errMercuri, Ludovica; Palmisano, Donato; L'Abbate, Alberto; D'Addabbo, Pietro; Montinaro, Francesco; Catacchio, Claudia Rita; Hasenfeld, Patrick; Ventura, Mario; Korbel, Jan O.; Sanders, Ashley D.; Maggiolini, Flavia Angela Maria; Antonacci, Francesca
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Research Directions

The data has not been retrieved yet.
Co-authors
Cooperation Journals
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Evan E. Eichler
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Mark Gerstein
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Richard A. Gibbs
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J
James R. Lupski
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Charles Lee
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