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Tomàs Pumarola

universitat autonoma de barcelona

46H-index
387Paper Count
9.7KCitation Count
Published Papers 136
Publication Date
Peaked-to-Flat Transition in Quasispecies Structure Evolution
err2026-04-14
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errJosep Gregori; Sergi Colomer-Castell; Carolina Campos; Marta Ibañez-Lligoña; Damir García-Cehic; Maria Francesca Cortese; David Tabernero; Mar Riveiro-Barciela; Maria Buti; Ariadna Rando-Segura; Roser Ferrer; Tomàs Pumarola; Cristina Andrés; Alejandra González-Sánchez; Andrés Antón; Francisco Rodriguez-Frias; Josep Quer
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Development of an automated artificial intelligence-based system for urogenital schistosomiasis diagnosis using digital image analysis techniques and a robotized microscope (vol 18, e0012614, 2024)
err2025-10-29
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errMaturana, Carles Rubio; de Oliveira, Allisson Dantas; Zarzuela, Francesc; Ruiz, Edurne; Sulleiro, Elena; Mediavilla, Alejandro; Martinez-Vallejo, Patricia; Nadal, Sergi; Pumarola, Tomas; Lopez-Codina, Daniel; Abello, Alberto; Sayrol, Elisa; Joseph-Munne, Joan
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Evolutionary dynamics of HRSV following the implementation of nirsevimab immunoprophylaxis in Catalonia (2023-2024)
err2025-08-05
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errAlejandra González-Sánchez; Cristina Andrés; Ignasi Prats-Méndez; Maria Piñana; Ermengol Coma; Albert Bernet; Cristina Casañ; Miguel Torralba-Calero; Cristina Gutiérrez; Gemma Recio Comí; Laura Calatayud; Narcís Saubi; Anna Creus-Costa; Jorgina Vila; Maria Arnedo-Muñoz; Ariadna Rando; Patricia Nadal-Baron; Juliana Esperalba; Eva Balada; Antoni Soriano-Arandes; Josefina Ayats; Jacobo Mendioroz; Juan José González-López; Nieves Larrosa; Tomàs Pumarola; Jaime Martínez-Urtaza; Andrés Antón
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Development of an automated artificial intelligence-based system for urogenital schistosomiasis diagnosis using digital image analysis techniques and a robotized microscope
err2024-11-05
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errMaturana, Carles Rubio; de Oliveira, Allisson Dantas; Zarzuela, Francesc; Ruiz, Edurne; Sulleiro, Elena; Mediavilla, Alejandro; Martinez-Vallejo, Patricia; Nadal, Sergi; Pumarola, Tomas; Lopez-Codina, Daniel; Abello, Alberto; Sayrol, Elisa; Joseph-Munne, Joan
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In-Host Flat-like Quasispecies: Characterization Methods and Clinical Implications
err2024-05-17
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errGregori, Josep; Colomer-Castell, Sergi; Ibanez-Lligona, Marta; Garcia-Cehic, Damir; Campos, Carolina; Buti, Maria; Riveiro-Barciela, Mar; Andres, Cristina; Pinana, Maria; Gonzalez-Sanchez, Alejandra; Rodriguez-Frias, Francisco; Cortese, Maria Francesca; Tabernero, David; Rando-Segura, Ariadna; Pumarola, Tomas; Esteban, Juan Ignacio; Anton, Andres; Quer, Josep
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Genomic evolution of human respiratory syncytial virus during a decade (2013-2023): bridging the path to monoclonal antibody surveillance
err2024-05-01
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errPinana, Maria; Gonzalez-Sanchez, Alejandra; Andres, Cristina; Vila, Jorgina; Creus-Costa, Anna; Prats-Mendez, Ignasi; Arnedo-Munoz, Maria; Saubi, Narcis; Esperalba, Juliana; Rando, Ariadna; Nadal-Baron, Patricia; Quer, Josep; Gonzalez-Lopez, Juan Jose; Soler-Palacin, Pere; Martinez-Urtaza, Jaime; Larrosa, Nieves; Pumarola, Tomas; Anton, Andres
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Integrating viral hepatitis management into the emergency department: A further step towards viral hepatitis elimination
err2024-01-01
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errLlaneras, Jordi; Ruiz-Cobo, Juan Carlos; Rando-Segura, Ariadna; Barreira-Diaz, Ana; Dominguez-Hernandez, Raquel; Rodriguez-Frias, Francisco; Campins, Magda; Colom, Joan; Casado, Miguel Angel; Blanco-Grau, Albert; Banares, Juan; Monforte, Arnau; Falco-Roget, Anna; Ruiz, Lourdes; Meza, Beatriz; Pumarola, Tomas; Riveiro-Barciela, Mar; Esteban, Rafael; Buti, Maria
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iMAGING: a novel automated system for malaria diagnosis by using artificial intelligence tools and a universal low-cost robotized microscope
err2023-11-24
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errMaturana, Carles Rubio; de Oliveira, Allisson Dantas; Nadal, Sergi; Serrat, Francesc Zarzuela; Sulleiro, Elena; Ruiz, Edurne; Bilalli, Besim; Veiga, Anna; Espasa, Mateu; Abello, Alberto; Sune, Tomas Pumarola; Segu, Marta; Lopez-Codina, Daniel; Clols, Elisa Sayrol; Joseph-Munne, Joan
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Oral fosfomycin for treatment of acute bacterial prostatitis caused by multidrug-resistant Enterobacterales
err2023-10-17
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errBurgos, Joaquin; Hoyos-Mallecot, Yannick; Ferre-Losa, Carles; Arando, Maider; Monforte, Arnau; Pumarola, Tomas; Los-Arcos, Ibai; Falco, Vicenc
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Impact of time of culture specimen collection on the recovery of Neisseria gonorrhoeae after a positive nucleic acid amplification test
err2023-10-06
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errNadal-Baron, Patricia; Trejo-Zahinos, Jesus; Garcia, Jorge Nestor; Salmeron, Paula; Sulleiro, Elena; Arando, Maider; Descalzo, Vicente; Alvarez-Lopez, Patricia; El Ouazzani, Rachid; Lopez, Luis; Zarzuela, Francesc; Ruiz, Edurne; Llinas, Montserrat; Blanco-Grau, Albert; Curran, Adrian; Larrosa, Maria Nieves; Pumarola, Tomas; Hoyos-Mallecot, Yannick
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Addressing influenza's underestimated burden - Iberian experts call to action
err2023-05-08
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errGil-de-Miguel, Angel; Diez-Domingo, Javier; Martinon-Torres, Federico; Marguello, Esther Redondo; de Lejarazu Leonardo, Raul Ortiz; Pumarola, Tomas; de Sousa, Jaime Correia; Rabacal, Carlos; Raposo, Joao; Cordeiro, Carlos Robalo; Froes, Filipe
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Kinetics of cellular and humoral immunogenicity and effectiveness of SARS-CoV-2 booster vaccination in hematologic neoplasms
err2023-05-08
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PREAI
errJimenez, Moraima; Fernandez-Naval, Candela; Navarro, Victor; Novoa, Sandra; Martinez-Gallo, Monica; Medina, Daniel; Andres, Cristina; Anton, Andres; Peralta, Soraya; Pujadas, Gemma; Hernandez, Cristina; Pages, Carlota; Roldan, Elisa; Pumarola, Tomas; Gironella, Mercedes; Ruiz-Camps, Isabel; Martinez-Gomez, Xavier; Valcarcel, David; Hernandez, Manuel; Bosch, Francesc; Crespo, Marta; Esperalba, Juliana; Abrisqueta, Pau
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Bioinformatic Tools for NGS-Based Metagenomics to Improve the Clinical Diagnosis of Emerging, Re-Emerging and New Viruses
err2023-02-20
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errIbanez-Lligona, Marta; Colomer-Castell, Sergi; Gonzalez-Sanchez, Alejandra; Gregori, Josep; Campos, Carolina; Garcia-Cehic, Damir; Andres, Cristina; Pinana, Maria; Pumarola, Tomas; Rodriguez-Frias, Francisco; Anton, Andres; Quer, Josep
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Increasing trend of antimicrobial resistance in Shigella associated with MSM transmission in Barcelona, 2020-21: outbreak of XRD Shigella sonnei and dissemination of ESBL-producing Shigella flexneri
err2023-02-10
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errMoreno-Mingorance, Albert; Mir-Cros, Alba; Goterris, Lidia; Rodriguez-Garrido, Virginia; Sulleiro, Elena; Barbera, M. Jesus; Alberny, Mireia; Hoyos-Mallecot, Yannick; Descalzo, Vicente; Bravo, Albert; Roca-Grande, Josep; Vinado, Belen; Pumarola, Tomas; Larrosa, M. Nieves; Gonzalez-Lopez, Juan Jose
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Excess hospitalizations and mortality associated with seasonal influenza in Spain, 2008-2018
err2023-02-07
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errPumarola, T.; Diez-Domingo, J.; Martinon-Torres, F.; Margueello, E. Redondo; Leonardo, R. Ortiz de Lejarazu; Carmo, M.; Bizouard, G.; Drago, G.; Lopez-Belmonte, J. L.; Bricout, H.; De Courville, C.; Gil-de-Miguel, A.
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Emergence of Delta and Omicron variants carrying resistance-associated mutations in immunocompromised patients undergoing sotrovimab treatment with long-term viral excretion
err2023-02-01
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errAndres, Cristina; Gonzalez-Sanchez, Alejandra; Jimenez, Moraima; Marquez-Algaba, Ester; Pinana, Maria; Fernandez-Naval, Candela; Esperalba, Juliana; Saubi, Narcis; Quer, Josep; Rando-Segura, Ariadna; Miarons, Marta; Codina, Maria Gema; Ruiz-Camps, Isabel; Pumarola, Tomas; Abrisqueta, Pau; Anton, Andres
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The frequency of defective genomes in Omicron differs from that of the Alpha, Beta and Delta variants
err2022-12-29
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errCampos, Carolina; Colomer-Castell, Sergi; Garcia-Cehic, Damir; Gregori, Josep; Andres, Cristina; Pinana, Maria; Gonzalez-Sanchez, Alejandra; Borras, Blanca; Pares-Badell, Oleguer; Adombi, Caroline Melanie; Ibanez-Lligona, Marta; Esperalba, Juliana; Codina, Maria Gema; Rando-Segura, Ariadna; Saubi, Narcis; Esteban, Juan Ignacio; Rodriguez-Frias, Francisco; Pumarola, Tomas; Anton, Andres; Quer, Josep
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Clinical and economic burden of physician-diagnosed influenza in adults during the 2017/2018 epidemic season in Spain
err2022-12-17
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errGil-de-Miguel, Angel; Martinon-Torres, Federico; Diez-Domingo, Javier; de Lejarazu Leonardo, Raul Ortiz; Pumarola, Tomas; Carmo, Mafalda; Drago, Georgina; Luis Lopez-Belmonte, Juan; Bricout, Helene; de Courville, Caroline; Redondo Marguello, Esther
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Molecular characterization and clinical impact of human bocavirus at a tertiary hospital in Barcelona (Catalonia, Spain) during the 2014-2017 seasons
err2022-11-19
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errPinana, Maria; Vila, Jorgina; Andres, Cristina; Saura, Jordi; Gonzalez-Sanchez, Alejandra; Creus-Costa, Anna; Saubi, Narcis; Esperalba, Juliana; Rando, Ariadna; Jesus Iglesias-Cabezas, Manuel; Quer, Josep; Soriano-Arandes, Antoni; Soler-Palacin, Pere; Pumarola, Tomas; Anton, Andres
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Advances and challenges in automated malaria diagnosis using digital microscopy imaging with artificial intelligence tools: A review
err2022-11-15
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errRubio Maturana, Carles; Dantas de Oliveira, Allisson; Nadal, Sergi; Bilalli, Besim; Zarzuela Serrat, Francesc; Espasa Soley, Mateu; Sulleiro Igual, Elena; Bosch, Mercedes; Veiga Lluch, Anna; Abello, Alberto; Lopez-Codina, Daniel; Pumarola Sune, Tomas; Sayrol Clols, Elisa; Joseph-Munne, Joan
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