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U

Ulf Ryde

 lund university

76H-index
378Paper Count
2.3WCitation Count
Published Papers 170
Publication Date
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Quantum refinement with electron diffraction and X-ray free-electron laser data: comparative study of ribonucleotide reductase dimetal site
errJournal of Applied Crystallography
IF2.8
err2026-04-01
err0
PREAI
errLundgren, Kristoffer J. M.; Sun, Xiaoli; Pacoste, Laura; Kumar, Rohit; Hofer, Gerhard; Xu, Hongyi; Zou, Xiaodong; Hogbom, Martin; Oksanen, Esko; Ryde, Ulf
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Critical evaluation of two neutron structures of Mn superoxide dismutase with quantum refinement
errJBIC Journal of Biological Inorganic Chemistry
IF2.7
err2026-03-10
err0
errOAAI
errKristoffer J. M. Lundgren; Justin Bergmann; Esko Oksanen; Ulf Ryde
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QM/MM study of the catalytic reaction of potato epoxide hydrolase
errInternational Journal of Biological Macromolecules
IF8.5
err2026-03-06
err0
PREAI
errMaryam Haji Dehabadi; Ulf Ryde; Mehdi Irani
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Can ferric-oxyl excited states explain elongated iron-oxygen bonds in heme peroxidase catalytic intermediates?
errNature Communications
IF15.7
err2026-02-03
err0
errOAAI
errLewis J. Williams; Jos J.A.G. Kamps; Adrian M. V. Brânzanic; Maria Lehene; Kristoffer J. M. Lundgren; Ulf Ryde; Kuntal Chatterjee; Margaret D. Doyle; Philipp S. Simon; Hiroki Makita; Amy J. Thompson; Aaron S. Brewster; Tiankun Zhou; Marina Lučić; Michael T. Wilson; Pierre Aller; Juan Sanchez-Weatherby; Leland Gee; Sebastian Dehe; Sandra Mous; Junko Yano; Vittal K. Yachandra; Michael A. Hough; Allen M. Orville; Jan F. Kern; Radu L. Silaghi-Dumitrescu; Jonathan A. R. Worrall
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How Structural Dynamics Influence the Substrate Oxidation Energetics in Lytic Polysaccharide Monooxygenase
errInorg. Chem. Front.
IF6.4
err2025-08-28
err0
PREAI
errMarlisa Muriel Hagemann; Ulf Ryde; Erik Donovan Hedegård
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Exploring the high sensitivity of DFT thermochemistry for protonation states of a ferredoxin model complex [ (CH3S)4Fe2III S2H ] -
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2025-04-22
err0
errOAAI
errVysotskiy, Victor P.; Ryde, Ulf
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Metal preference of glyoxalase II, a quantum mechanics/molecular mechanics study
errDALTON TRANSACTIONS
IF3.3
err2025-03-01
err0
PREAI
errShirazi, Javad; Jafari, Sonia; Ryde, Ulf; Irani, Mehdi
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Predicting Reduction Potentials of Blue Copper Proteins Using Quantum Mechanical Calculations
errINORGANIC CHEMISTRY
IF4.7
err2025-02-20
err0
PREAI
errDehabadi, Maryam Haji; Irani, Mehdi; Ryde, Ulf
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Impact of Varying Velocities and Solvation Boxes on Alchemical Free-Energy Simulations
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2025-01-31
err0
errOAAI
errWang, Meiting; Jiang, Hao; Ryde, Ulf
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The CuB site in particulate methane monooxygenase may be used to produce hydrogen peroxide
errDALTON TRANSACTIONS
IF3.3
err2025-01-01
err0
errOAAI
errLundgren, Kristoffer J. M.; Cao, Lili; Torbjornsson, Magne; Hedegard, Erik D.; Ryde, Ulf
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The mechanism behind the oxidase activity of cellulose-active AA10 lytic polysaccharide monooxygenases
errINORGANIC CHEMISTRY FRONTIERS
IF6.4
err2025-01-01
err0
PREAI
errWieduwilt, Erna K.; Hagemann, Marlisa M.; Ryde, Ulf; Hedegard, Erik D.
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Investigating the Substrate Oxidation Mechanism in Lytic Polysaccharide Monooxygenase: H2O2- versus O2-Activation
errINORGANIC CHEMISTRY
IF4.7
err2024-11-08
err2
PREAI
errHagemann, Marlisa M.; Wieduwilt, Erna K.; Ryde, Ulf; Hedegard, Erik D.
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Reaction Mechanism for CO Reduction by Mo-Nitrogenase Studied by QM/MM
errINORGANIC CHEMISTRY
IF4.7
err2024-08-14
err0
errOAAI
errJiang, Hao; Ryde, Ulf
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errSave
Unraveling the Binding Mode of Cyclic Adenosine-Inosine Monophosphate (cAIMP) to STING through Molecular Dynamics Simulations
errMOLECULES
IF4.6
err2024-06-04
err0
errOAAI
errWang, Meiting; Fan, Baoyi; Lu, Wenfeng; Ryde, Ulf; Chang, Yuxiao; Han, Di; Lu, Jiarui; Liu, Taigang; Gao, Qinghe; Chen, Changpo; Xu, Yongtao
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QM/MM study of the catalytic reaction of aphid myrosinase
errINTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
IF8.5
err2024-03-01
err0
PREAI
errJafari, Sonia; Ryde, Ulf; Irani, Mehdi
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Putative reaction mechanism of nitrogenase with a half-dissociated S2B ligand
errDALTON TRANSACTIONS
IF3.3
err2024-01-01
err1
errOAAI
errJiang, Hao; Ryde, Ulf
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errSave
Convergence criteria for single-step free-energy calculations: the relation between the Π bias measure and the sample variance
errCHEMICAL SCIENCE
IF7.4
err2024-01-01
err1
errOAAI
errWang, Meiting; Mei, Ye; Ryde, Ulf
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errSave
Protonation of Homocitrate and the E1 State of Fe-Nitrogenase Studied by QM/MM Calculations
errINORGANIC CHEMISTRY
IF4.7
err2023-11-21
err5
errOAAI
errJiang, Hao; Lundgren, Kristoffer J. M.; Ryde, Ulf
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Assessment of DFT functionals for a minimal nitrogenase [Fe(SH)4H]- model employing state-of-the-art ab initio methods
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2023-07-24
err5
errOAAI
errVysotskiy, Victor P.; Torbjornsson, Magne; Jiang, Hao; Larsson, Ernst D.; Cao, Lili; Ryde, Ulf; Zhai, Huanchen; Lee, Seunghoon; Chan, Garnet Kin-Lic
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Two local minima for structures of [4Fe-4S] clusters obtained with density functional theory methods
errSCIENTIFIC REPORTS
IF3.9
err2023-07-04
err4
errOAAI
errJafari, Sonia; Ryde, Ulf; Irani, Mehdi
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Research Directions

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Co-authors
Cooperation Journals
F
Frank Neese
H-index: 141 · Papers: 980
E
Eckhard Bill
H-index: 96 · Papers: 1.2K
P
Per E. M. Siegbahn
H-index: 95 · Papers: 552
H
Hakon Leffler
H-index: 85 · Papers: 420
J
Junko Yano
H-index: 84 · Papers: 521
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