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Xinqiang Ding

university of michigan system

15H-index
32Paper Count
835Citation Count
Published Papers 13
Publication Date
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Bayesian Approach for Computing Free Energy on Perturbation Graphs with Cycles
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2024-11-19
err0
PREAI
errDing, Xinqiang; Drohan, John
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Bayesian Multistate Bennett Acceptance Ratio Methods
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2024-02-22
err2
errOAAI
errDing, Xinqiang
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errSave
Transferable Implicit Solvation via Contrastive Learning of Graph Neural Networks
errACS CENTRAL SCIENCE
IF10.4
err2023-11-16
err5
errOAAI
errAiras, Justin; Ding, Xinqiang; Zhang, Bin
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Efficient Hi-C inversion facilitates chromatin folding mechanism discovery and structure prediction
errBIOPHYSICAL JOURNAL
IF3.1
err2023-09-01
err3
errOAAI
errSchuette, Greg; Ding, Xinqiang; Zhang, Bin
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errSave
Generalizing the Discrete Gibbs Sampler-Based λ-Dynamics Approach for Multisite Sampling of Many Ligands
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2021-06-08
err10
errOAAI
errVilseck, Jonah Z.; Ding, Xinqiang; Hayes, Ryan L.; Brooks, Charles L.
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errSave
Stability and folding pathways of tetra-nucleosome from six-dimensional free energy surface
errNATURE COMMUNICATIONS
IF15.7
err2021-02-17
err33
errOAAI
errDing, Xinqiang; Lin, Xingcheng; Zhang, Bin
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errSave
Accelerated CDOCKER with GPUs, Parallel Simulated Annealing, and Fast Fourier Transforms
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2020-05-06
err43
errOAAI
errDing, Xinqiang; Wu, Yujin; Wang, Yanming; Vilseck, Jonah Z.; Brooks, Charles L., III
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errSave
Deciphering protein evolution and fitness landscapes with latent space models
errNATURE COMMUNICATIONS
IF15.7
err2019-12-10
err59
errOAAI
errDing, Xinqiang; Zou, Zhengting; Brooks, Charles L., III
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errSave
Fast Solver for Large Scale Multistate Bennett Acceptance Ratio Equations
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2019-01-28
err35
errOAAI
errDing, Xinqiang; Vilseck, Jonah Z.; Brooks, Charles L., III
errShare
errSave
CDOCKER and λ-dynamics for prospective prediction in D3R Grand Challenge 2
errJOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
IF3.1
err2017-09-07
err13
errOAAI
errDing, Xinqiang; Hayes, Ryan L.; Vilseck, Jonah Z.; Charles, Murchtricia K.; Brooks, Charles L., III
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errSave
Gibbs Sampler-Based λ-Dynamics and Rao-Blackwell Estimator for Alchemical Free Energy Calculation
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2017-05-26
err36
errOAAI
errDing, Xinqiang; Vilseck, Jonah Z.; Hayes, Ryan L.; Brooks, Charles L., III
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errSave
Mechanism of Vps4 hexamer function revealed by cryo-EM
errSCIENCE ADVANCES
IF12.5
err2017-04-07
err48
errOAAI
errSu, Min; Guo, Emily Z.; Ding, Xinqiang; Li, Yan; Tarrasch, Jeffrey T.; Brooks, Charles L., III; Xu, Zhaohui; Skiniotis, Georgios
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errSave
Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing data
errNUCLEIC ACIDS RESEARCH
IF13.1
err2015-07-13
err76
errOAAI
errWu, Yang; Shi, Binbin; Ding, Xinqiang; Liu, Tong; Hu, Xihao; Yip, Kevin Y.; Yang, Zheng Rong; Mathews, David H.; Lu, Zhi John
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Research Directions

No research directions
Co-authors
Cooperation Journals
C
Charles L. Brooks
H-index: 104 · Papers: 675
G
Georgios Skiniotis
H-index: 66 · Papers: 216
D
David H. Mathews
H-index: 55 · Papers: 285
K
Kevin Y. Yip
H-index: 50 · Papers: 260
鲁
鲁志 (Zhi John Lu)
H-index: 39 · Papers: 111
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