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Pablo Conesa

consejo superior de investigaciones cientificas (csic)

21H-index
58Paper Count
3.0KCitation Count
Published Papers 21
Publication Date
How many (distinguishable) classes can we identify in single-particle analysis?
err2025-10-01
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errLauzirika, O.; Pernica, M.; Herreros, D.; Ramirez-Aportela, E.; Krieger, J.; Gragera, M.; Iceta, M.; Conesa, P.; Fonseca, Y.; Jimenez, J.; Filipovic, J.; Carazo, J. M.; Sorzano, C. O. S.
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ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation
err2022-09-01
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errde la Morena, J. Jimenez; Conesa, P.; Fonseca, Y. C.; de Isidro-Gomez, F. P.; Herreros, D.; Fernandez-Gimenez, E.; Strelak, D.; Moebel, E.; Buchholz, T. O.; Jug, F.; Martinez-Sanchez, A.; Harastani, M.; Jonic, S.; Conesa, J. J.; Cuervo, A.; Losana, P.; Sanchez, I.; Iceta, M.; del Cano, L.; Gragera, M.; Melero, R.; Sharov, G.; Castano-Diez, D.; Koster, A.; Piccirillo, J. G.; Vilas, J. L.; Oton, J.; Marabini, R.; Sorzano, C. O. S.; Carazo, J. M.
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Image processing tools for the validation of CryoEM maps
err2022-01-01
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errSorzano, C. O. S.; Vilas, J. L.; Ramirez-Aportela, E.; Krieger, J.; del Hoyo, D.; Herreros, D.; Fernandez-Gimenez, E.; Marchan, D.; Macias, J. R.; Sanchez, I; del Cano, L.; Fonseca-Reyna, Y.; Conesa, P.; Garcia-Mena, A.; Burguet, J.; Garcia Condado, J.; Mendez Garcia, J.; Martinez, M.; Munoz-Barrutia, A.; Marabini, R.; Vargas, J.; Carazo, J. M.
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Cryo-EM density maps adjustment for subtraction, consensus and sharpening
err2021-12-01
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errGimenez, E. Fernandez; Martinez, M.; Sanchez-Garcia, R.; Marabini, R.; Ramirez-Aportela, E.; Conesa, P.; Carazo, J. M.; Sorzano, C. O. S.
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Advances in Xmipp for Cryo-Electron Microscopy: From Xmipp to Scipion
err2021-10-15
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errStrelak, David; Jimenez-Moreno, Amaya; Vilas, Jose L.; Ramirez-Aportela, Erney; Sanchez-Garcia, Ruben; Maluenda, David; Vargas, Javier; Herreros, David; Fernandez-Gimenez, Estrella; de Isidro-Gomez, Federico P.; Horacek, Jan; Myska, David; Horacek, Martin; Conesa, Pablo; Fonseca-Reyna, Yunior C.; Jimenez, Jorge; Martinez, Marta; Harastani, Mohamad; Jonic, Slavica; Filipovic, Jiri; Marabini, Roberto; Carazo, Jose M.; Sorzano, Carlos O. S.
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Algorithmic robustness to preferred orientations in single particle analysis by CryoEM
err2021-03-01
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errSorzano, C. O. S.; Semchonok, D.; Lin, S-C; Lo, Y-C; Vilas, J. L.; Jimenez-Moreno, A.; Gragera, M.; Vacca, S.; Maluenda, D.; Martinez, M.; Ramirez-Aportela, E.; Melero, R.; Cuervo, A.; Conesa, J. J.; Conesa, P.; Losana, P.; Del Cano, L.; Jimenez de la Morena, J.; Fonseca, Y. C.; Sanchez-Garcia, R.; Strelak, D.; Fernandez-Gimenez, E.; de Isidro, F.; Herreros, D.; Kastritis, P. L.; Marabini, R.; Bruce, B. D.; Carazo, J. M.
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FSC-Q: a CryoEM map-to-atomic model quality validation based on the local Fourier shell correlation
err2021-01-04
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errRamirez-Aportela, Erney; Maluenda, David; Fonseca, Yunior C.; Conesa, Pablo; Marabini, Roberto; Bernard Heymann, J.; Maria Carazo, Jose; Sorzano, Carlos Oscar S.
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Re-examining the spectra of macromolecules. Current practice of spectral quasi B-factor flattening
err2020-03-01
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PREAI
errVilas, J. L.; Vargas, J.; Martinez, M.; Ramirez-Aportela, E.; Melero, R.; Jimenez-Moreno, A.; Garduno, E.; Conesa, P.; Marabini, R.; Maluenda, D.; Carazo, J. M.; Sorzano, C. O. S.
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Integration of Cryo-EM Model Building Software in Scipion
err2020-01-29
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errMartinez, M.; Jimenez-Moreno, A.; Maluenda, D.; Ramirez-Aportela, E.; Melero, R.; Cuervo, A.; Conesa, P.; del Cano, L.; Fonseca, Y. C.; Sanchez-Garcia, R.; Strelak, D.; Conesa, J. J.; Fernandez-Gimenez, E.; de Isidro, F.; Sorzano, C. O. S.; Carazo, J. M.; Marabini, R.
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Measurement of local resolution in electron tomography
err2020-01-01
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errVilas, J. L.; Oton, J.; Messaoudi, C.; Melero, R.; Conesa, P.; Ramirez-Aportela, E.; Mota, J.; Martinez, M.; Jimenez, A.; Marabini, R.; Carazo, J. M.; Vargas, J.; Sorzano, C. O. S.
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Using Scipion for stream image processing at Cryo-EM facilities
err2018-12-01
err26
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errGomez-Blanco, J.; de la Rosa-Trevin, J. M.; Marabini, R.; del Cano, L.; Jimenez, A.; Martinez, M.; Melero, R.; Majtner, T.; Maluenda, D.; Mota, J.; Rancel, Y.; Ramirez-Aportela, E.; Vilas, J. L.; Carroni, M.; Fleischmann, S.; Lindahl, E.; Ashton, A. W.; Basham, M.; Clare, D. K.; Savage, K.; Siebert, C. A.; Sharov, G. G.; Sorzano, C. O. S.; Conesa, P.; Carazo, J. M.
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A new algorithm for high-resolution reconstruction of single particles by electron microscopy
err2018-11-01
err24
PREAI
errSorzano, C. O. S.; Vargas, J.; de la Rosa-Trevin, J. M.; Jimenez, A.; Maluenda, D.; Melero, R.; Martinez, M.; Ramirez-Aportela, E.; Conesa, P.; Vilas, J. L.; Marabini, R.; Carazo, J. M.
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Blind estimation of DED camera gain in Electron Microscopy
err2018-08-01
err6
PREAI
errSorzano, C. O. S.; Fernandez-Gimenez, E.; Peredo-Robinson, V; Vargas, J.; Majtner, T.; Caffarena, G.; Oton, J.; Vilas, J. L.; de la Rosa-Trevin, J. M.; Melero, R.; Gomez-Blanco, J.; Cuenca, J.; del Cano, L.; Conesa, P.; Marabini, R.; Carazo, J. M.
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ScipionCloud: An integrative and interactive gateway for large scale cryo electron microscopy image processing on commercial and academic clouds
err2017-10-01
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errCuenca-Alba, Jesus; del Cano, Laura; Gomez Blanco, Josue; de la Rosa Trevin, Jose Miguel; Conesa Mingo, Pablo; Marabini, Roberto; Sorzano, Carlos Oscar S.; Maria Carazo, Jose
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Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy
err2016-07-01
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errde la Rosa-Trevin, J. M.; Quintana, A.; del Cano, L.; Zaldivar, A.; Foche, I.; Gutierrez, J.; Gomez-Blanco, J.; Burguet-Castell, J.; Cuenca-Alba, J.; Abrishami, V.; Vargas, J.; Oton, J.; Sharov, G.; Vilas, J. L.; Navas, J.; Conesa, P.; Kazemi, M.; Marabini, R.; Sorzano, C. O. S.; Carazo, J. M.
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Coordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access (vol 11, pg 1587, 2015)
err2015-07-10
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errSalek, Reza M.; Neumann, Steffen; Schober, Daniel; Hummel, Jan; Billiau, Kenny; Kopka, Joachim; Correa, Elon; Reijmers, Theo; Rosato, Antonio; Tenori, Leonardo; Turano, Paola; Marin, Silvia; Deborde, Catherine; Jacob, Daniel; Rolin, Dominique; Dartigues, Benjamin; Conesa, Pablo; Haug, Kenneth; Rocca-Serra, Philippe; O'Hagan, Steve; Hao, Jie; van Vliet, Michael; Sysi-Aho, Marko; Ludwig, Christian; Bouwman, Jildau; Cascante, Marta; Ebbels, Timothy; Griffin, Julian L.; Moing, Annick; Nikolski, Macha; Oresic, Matej; Sansone, Susanna-Assunta; Viant, Mark R.; Goodacre, Royston; Guenther, Ulrich L.; Hankemeier, Thomas; Luchinat, Claudio; Walther, Dirk; Steinbeck, Christoph
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COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access
err2015-05-26
err114
errOAAI
errSalek, Reza M.; Neumann, Steffen; Schober, Daniel; Hummel, Jan; Billiau, Kenny; Kopka, Joachim; Correa, Elon; Reijmers, Theo; Rosato, Antonio; Tenori, Leonardo; Turano, Paola; Marin, Silvia; Deborde, Catherine; Jacob, Daniel; Rolin, Dominique; Dartigues, Benjamin; Conesa, Pablo; Haug, Kenneth; Rocca-Serra, Philippe; O'Hagan, Steve; Hao, Jie; Vliet, Michael van; Sysi-Aho, Marko; Ludwig, Christian; Bouwman, Jildau; Cascante, Marta; Ebbels, Timothy; Griffin, Julian L.; Moing, Annick; Nikolski, Macha; Oresic, Matej; Sansone, Susanna-Assunta; Viant, Mark R.; Goodacre, Royston; Guenther, Ulrich L.; Hankemeier, Thomas; Luchinat, Claudio; Walther, Dirk; Steinbeck, Christoph
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SpeckTackle: JavaScript charts for spectroscopy
err2015-05-09
err8
errOAAI
errBeisken, Stephan; Conesa, Pablo; Haug, Kenneth; Salek, Reza M.; Steinbeck, Christoph
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The MetaboLights repository: curation challenges in metabolomics
err2013-04-27
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errSalek, Reza M.; Haug, Kenneth; Conesa, Pablo; Hastings, Janna; Williams, Mark; Mahendraker, Tejasvi; Maguire, Eamonn; Gonzalez-Beltran, Alejandra N.; Rocca-Serra, Philippe; Sansone, Susanna-Assunta; Steinbeck, Christoph
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MetaboLights-an open-access general-purpose repository for metabolomics studies and associated meta-data
err2012-10-29
err510
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errHaug, Kenneth; Salek, Reza M.; Conesa, Pablo; Hastings, Janna; de Matos, Paula; Rijnbeek, Mark; Mahendraker, Tejasvi; Williams, Mark; Neumann, Steffen; Rocca-Serra, Philippe; Maguire, Eamonn; Gonzalez-Beltran, Alejandra; Sansone, Susanna-Assunta; Griffin, Julian L.; Steinbeck, Christoph
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