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Robert L. Jernigan

Iowa State University

64H-index
410Paper Count
1.8WCitation Count
Published Papers 97
Publication Date
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PET-FBA: A Lightweight Enzyme Allocation and Thermodynamics-Constrained Flux Analysis Approach to Explore Escherichia coli Metabolic adaptation to Intracellular Acidification
errMetabolic Engineering
IF6.8
err2025-12-11
err0
errOAAI
errChao Wu; Jeffrey Law; Onyeka Onyenemezu; Jetendra K. Roy; Peter St. John; Robert L. Jernigan; Yannick J. Bomble; Laura Jarboe
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Evaluation of enzyme activity predictions for variants of unknown significance in Arylsulfatase A
errHUMAN GENETICS
IF3.6
err2025-03-01
err0
errOAAI
errJain, Shantanu; Trinidad, Marena; Nguyen, Thanh Binh; Jones, Kaiya; Neto, Santiago Diaz; Ge, Fang; Glagovsky, Ailin; Jones, Cameron; Moran, Giankaleb; Wang, Boqi; Rahimi, Kobra; Calici, Suemeyra Zeynep; Cedillo, Luis R.; Berardelli, Silvia; Ozden, Buse; Chen, Ken; Katsonis, Panagiotis; Williams, Amanda; Lichtarge, Olivier; Rana, Sadhna; Pradhan, Swatantra; Srinivasan, Rajgopal; Sajeed, Rakshanda; Joshi, Dinesh; Faraggi, Eshel; Jernigan, Robert; Kloczkowski, Andrzej; Xu, Jierui; Song, Zigang; Ozkan, Selen; Padilla, Natalia; de la Cruz, Xavier; Acuna-Hidalgo, Rocio; Grafmueller, Andrea; Barron, Laura T. Jimenez; Manfredi, Matteo; Savojardo, Castrense; Babbi, Giulia; Martelli, Pier Luigi; Casadio, Rita; Sun, Yuanfei; Zhu, Shaowen; Shen, Yang; Pucci, Fabrizio; Rooman, Marianne; Cia, Gabriel; Raimondi, Daniele; Hermans, Pauline; Kwee, Sofia; Chen, Ella; Astore, Courtney; Kamandula, Akash; Pejaver, Vikas; Ramola, Rashika; Velyunskiy, Michelle; Zeiberg, Daniel; Mishra, Reet; Sterling, Teague; Goldstein, Jennifer L.; Lugo-Martinez, Jose; Kazi, Sufyan; Li, Sindy; Long, Kinsey; Brenner, Steven E.; Bakolitsa, Constantina; Radivojac, Predrag; Suhr, Dean; Suhr, Teryn; Clark, Wyatt T.
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Major advances in protein function assignment by remote homolog detection with protein language models - A review
errCURRENT OPINION IN STRUCTURAL BIOLOGY
IF7
err2025-02-01
err0
PREAI
errKilinc, Mesih; Jia, Kejue; Jernigan, Robert L.
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errSave
Rapid discrimination between deleterious and benign missense mutations in the CAGI 6 experiment
errHUMAN GENOMICS
IF4.3
err2024-08-27
err0
errOAAI
errFaraggi, Eshel; Jernigan, Robert L.; Kloczkowski, Andrzej
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Tubulin CFEOM mutations both inhibit or activate kinesin motor activity
errMOLECULAR BIOLOGY OF THE CELL
IF2.7
err2024-03-01
err0
errOAAI
errLuchniak, Anna; Roy, Pallavi Sinha; Kumar, Ambuj; Schneider, Ian C.; Gelfand, Vladimir I.; Jernigan, Robert L.; Gupta Jr, Mohan L.
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errSave
Characterizing interactions in E-cadherin assemblages
errBIOPHYSICAL JOURNAL
IF3.1
err2023-08-01
err0
errOAAI
errShome, Sayane; Jia, Kejue; Sivasankar, Sanjeevi; Jernigan, Robert L.
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errSave
Improved global protein homolog detection with major gains in function identification
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-02-24
err23
errOAAI
errKilinc, Mesih; Jia, Kejue; Jernigan, Robert L.
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errSave
Protein folds vs. protein folding: Differing questions, different challenges
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2022-12-29
err51
errOAAI
errChen, Shi-Jie; Hassan, Mubashir; Jernigan, Robert L.; Jia, Kejue; Kihara, Daisuke; Kloczkowski, Andrzej; Kotelnikov, Sergei; Kozakov, Dima; Liang, Jie; Liwo, Adam; Matysiak, Silvina; Meller, Jarek; Micheletti, Cristian; Mitchell, Julie C.; Mondal, Sayantan; Nussinov, Ruth; Okazaki, Kei-ichi; Padhorny, Dzmitry; Skolnick, Jeffrey; Sosnick, Tobin R.; Stan, George; Vakser, Ilya; Zou, Xiaoqin; Rose, George D.
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errSave
Entropies Derived from the Packing Geometries within a Single Protein Structure
errACS OMEGA
IF4.3
err2022-06-09
err5
errOAAI
errKhade, Pranav M.; Jernigan, Robert L.
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errSave
hdANM: a new comprehensive dynamics model for protein hinges
errBIOPHYSICAL JOURNAL
IF3.1
err2021-11-01
err5
errOAAI
errKhade, Pranav M.; Scaramozzino, Domenico; Kumar, Ambuj; Lacidogna, Giuseppe; Carpinteri, Alberto; Jernigan, Robert L.
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errSave
Simulated Drug Efflux for the AbgT Family of Membrane Transporters
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2021-10-29
err2
errOAAI
errShome, Sayane; Sankar, Kannan; Jernigan, Robert L.
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errSave
Non-coding RNA in raw and commercially processed milk and putative targets related to growth and immune-response
errBMC GENOMICS
IF3.7
err2021-10-17
err16
errOAAI
errShome, S.; Jernigan, R. L.; Beitz, D. C.; Clark, S.; Testroet, E. D.
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errSave
Ligand Binding Introduces Significant Allosteric Shifts in the Locations of Protein Fluctuations
errFRONTIERS IN MOLECULAR BIOSCIENCES
IF4
err2021-09-01
err12
errOAAI
errKumar, Ambuj; Jernigan, Robert L.
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errSave
Xyloglucan Xylosyltransferase 1 Displays Promiscuity Toward Donor Substrates During in Vitro Reactions
errPLANT AND CELL PHYSIOLOGY
IF4
err2021-08-13
err10
PREAI
errEhrlich, Jacqueline J.; Weerts, Richard M.; Shome, Sayane; Culbertson, Alan T.; Honzatko, Richard B.; Jernigan, Robert L.; Zabotina, Olga A.
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errSave
Computational Ways to Enhance Protein Inhibitor Design
errFRONTIERS IN MOLECULAR BIOSCIENCES
IF4
err2021-02-03
err1
errOAAI
errJernigan, Robert L.; Sankar, Kannan; Jia, Kejue; Faraggi, Eshel; Kloczkowski, Andrzej
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errSave
New amino acid substitution matrix brings sequence alignments into agreement with structure matches
errPROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
IF2.8
err2021-02-02
err14
errOAAI
errJia, Kejue; Jernigan, Robert L.
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errSave
Structural compliance: A new metric for protein flexibility
errPROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
IF2.8
err2020-07-14
err10
errOAAI
errScaramozzino, Domenico; Khade, Pranav M.; Jernigan, Robert L.; Lacidogna, Giuseppe; Carpinteri, Alberto
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errSave
Structure and function of LCI1: a plasma membrane CO2 channel in the Chlamydomonas CO2 concentrating mechanism
errPLANT JOURNAL
IF5.7
err2020-04-18
err16
errOAAI
errKono, Alfredo; Chou, Tsung-Han; Radhakrishnan, Abhijith; Bolla, Jani Reddy; Sankar, Kannan; Shome, Sayane; Su, Chih-Chia; Jernigan, Robert L.; Robinson, Carol V.; Yu, Edward W.; Spalding, Martin H.
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Combinatorial biosynthesis and the basis for substrate promiscuity in class I diterpene synthases
errMETABOLIC ENGINEERING
IF6.8
err2019-09-01
err27
errOAAI
errJia, Meirong; Mishra, Sambit K.; Tufts, Samuel; Jernigan, Robert L.; Peters, Reuben J.
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errSave
Coupling dynamics and evolutionary information with structure to identify protein regulatory and functional binding sites
errPROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
IF2.8
err2019-06-22
err22
errOAAI
errMishra, Sambit K.; Kandoi, Gaurav; Jernigan, Robert L.
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
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E
Ettore Appella
H-index: 131 · Papers: 679
R
Ruth Nussinov
H-index: 131 · Papers: 1.2K
P
Paul J. Flory
H-index: 126 · Papers: 450
I
IoshikhesIlya (İvet Bahar)
H-index: 89 · Papers: 588
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