Andy Pereira - Publications, H-index & Citations

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Andy Pereira

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51H-index

237Paper Count

1.3WCitation Count

Published Papers 47

Publication Date

Integrative genomic approaches to unravel genomic regions and candidate genes associated with flag leaf photosynthesis at the reproductive stage in rice

Frontiers in Plant Science

IF4.8

2026-04-23

OAAI

AR Awais Riaz †; AK Anuj Kumar †; YD Yheni Dwiningsih; AS Alexander Silva Cordoba; AS Ainong Shi; CC Caio Canella Vieira †; AP Andy Pereira; JT Julie Thomas

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High Nighttime Temperature (HNT)-Responsive MicroRNA profiles in Developing Caryopses and Flag Leaves of 13 Rice Varieties

Plant Stress

IF6.9

2026-02-24

OAAI

David Payne; Yongfang Li; Pei Jia Ng; Ganesan Govindan; Julie Thomas; Anuj Kumar; Jai S. Rohila; Andy Pereira; Ramanjulu Sunkar

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Rice master regulator 'HYR' enhances growth and defense mechanisms with consequences for fall armyworm growth and host selection

PLANT AND CELL PHYSIOLOGY

IF4

2025-04-01

PREAI

Gandham, Krishnarao; Thomas, Julie; Riaz, Awais; Balakrishnan, Devi; Pereira, Andy; Kariyat, Rupesh

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Effects of measurement methods and growing conditions on phenotypic expression of photosynthesis in seven diverse rice genotypes

FRONTIERS IN PLANT SCIENCE

IF4.8

2023-09-21

OAAI

Reavis, Megan; Purcell, Larry C.; Pereira, Andy; Naithani, Kusum

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Molecular mapping and characterization of QTLs for grain quality traits in a RIL population of US rice under high nighttime temperature stress

SCIENTIFIC REPORTS

IF3.9

2023-03-25

OAAI

Kumar, Anuj; Thomas, Julie; Gill, Navdeep; Dwiningsih, Yheni; Ruiz, Charles; Famoso, Adam; Pereira, Andy

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Genetic Dissection of Grain Yield Component Traits Under High Nighttime Temperature Stress in a Rice Diversity Panel

FRONTIERS IN PLANT SCIENCE

IF4.8

2021-09-28

OAAI

Kumar, Anuj; Gupta, Chirag; Thomas, Julie; Pereira, Andy

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The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes

FRONTIERS IN PLANT SCIENCE

IF4.8

2020-03-04

OAAI

Singh, Raksha; Liyanage, Rohana; Gupta, Chirag; Lay, Jackson O., Jr.; Pereira, Andy; Rojas, Clemencia M.

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The FATTY ACID DESATURASE2 Family in Tomato Contributes to Primary Metabolism and Stress Responses

PLANT PHYSIOLOGY

IF6.9

2019-11-25

OAAI

Lee, Min Woo; Padilla, Carmen S.; Gupta, Chirag; Galla, Aravind; Pereira, Andy; Li, Jiamei; Goggin, Fiona L.

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Effectiveness of a Seed Plate Assay for Evaluating Charcoal Rot Resistance in Soybean and the Relationship to Field Performance

PLANT DISEASE

IF4.4

2019-08-01

OAAI

da Silva, Marcos P.; Pereira, Andy; Rupe, John C.; Bluhm, Burt H.; Gbur, Edward E.; Wood, Lisa; Mozzoni, Leandro A.; Chen, Pengyin

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RNA sequencing analysis of salt tolerance in soybean (Glycine max)

GENOMICS

IF3

2019-07-01

OAAI

Zeng, Ailan; Chen, Pengyin; Korth, Ken L.; Ping, Jieqing; Thomas, Julie; Wu, Chengjun; Srivastava, Subodh; Pereira, Andy; Hancock, Floyd; Brye, Kristofor; Ma, Jianxin

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Reproductive Long Intergenic Noncoding RNAs Exhibit Male Gamete Specificity and Polycomb Repressive Complex 2-Mediated Repression

PLANT PHYSIOLOGY

IF6.9

2018-05-29

OAAI

Johnson, Cameron; Conrad, Liza J.; Patel, Ravi; Anderson, Sarah; Li, Chenxin; Pereira, Andy; Sundaresan, Venkatesan

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RECoN: Rice Environment Coexpression Network for Systems Level Analysis of Abiotic-Stress Response

FRONTIERS IN PLANT SCIENCE

IF4.8

2017-09-20

OAAI

Krishnan, Arjun; Gupta, Chirag; Ambavaram, Madana M. R.; Pereira, Andy

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GBF3 transcription factor imparts drought tolerance in Arabidopsis thaliana

SCIENTIFIC REPORTS

IF3.9

2017-08-22

OAAI

Ramegowda, Venkategowda; Gill, Upinder Singh; Sivalingam, Palaiyur Nanjappan; Gupta, Aarti; Gupta, Chirag; Govind, Geetha; Nataraja, Karaba N.; Pereira, Andy; Udayakumar, Makarla; Mysore, Kirankumar S.; Senthil-Kumar, Muthappa

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Introgression of Clearfield™ rice crop traits into weedy red rice outcrosses

FIELD CROPS RESEARCH

IF6.4

2017-06-01

OAAI

Singh, Vijay; Singh, Shilpa; Black, Howard; Boyett, Virginia; Basu, Supratim; Gealy, David; Gbur, Edward; Pereira, Andy; Scott, Robert C.; Caicedo, Ana; Burgos, Nilda R.

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Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana

PLANT JOURNAL

IF5.7

2016-09-27

OAAI

Lozano-Sotomayor, Paulina; Chavez Montes, Ricardo A.; Silvestre-Vano, Marina; Herrera-Ubaldo, Humberto; Greco, Raffaella; Pablo-Villa, Jeanneth; Galliani, Bianca M.; Diaz-Ramirez, David; Weemen, Mieke; Boutilier, Kim; Pereira, Andy; Colombo, Lucia; Madueno, Francisco; Marsch-Martinez, Nayelli; de Folter, Stefan

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Plant Abiotic Stress Challenges from the Changing Environment

FRONTIERS IN PLANT SCIENCE

IF4.8

2016-07-27

206

OAAI

Pereira, Andy

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Coordinated regulation of photosynthesis in rice increases yield and tolerance to environmental stress

NATURE COMMUNICATIONS

IF15.7

2014-10-31

242

OAAI

Ambavaram, Madana M. R.; Basu, Supratim; Krishnan, Arjun; Ramegowda, Venkategowda; Batlang, Utlwang; Rahman, Lutfor; Baisakh, Niranjan; Pereira, Andy

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Rice GROWTH UNDER DROUGHT KINASE Is Required for Drought Tolerance and Grain Yield under Normal and Drought Stress Conditions

PLANT PHYSIOLOGY

IF6.9

2014-09-10

OAAI

Ramegowda, Venkategowda; Basu, Supratim; Krishnan, Arjun; Pereira, Andy

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The NTT transcription factor promotes replum development in Arabidopsis fruits

PLANT JOURNAL

IF5.7

2014-08-27

PREAI

Marsch-Martinez, Nayelli; Zuniga-Mayo, Victor M.; Herrera-Ubaldo, Humberto; Ouwerkerk, Pieter B. F.; Pablo-Villa, Jeanneth; Lozano-Sotomayor, Paulina; Greco, Raffaella; Ballester, Patricia; Balanza, Vicente; Kuijt, Suzanne J. H.; Meijer, Annemarie H.; Pereira, Andy; Ferrandiz, Cristina; de Folter, Stefan

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Transposon based activation tagging in diploid strawberry and monoploid derivatives of potato

PLANT CELL REPORTS

IF4.5

2014-04-12

PREAI

Lu, Nan; Carter, Jared D.; Medina, Tatiana Boluarte; Holt, Sarah H.; Manrique-Carpintero, Norma Constanza; Upham, Kendall T.; Pereira, Andy; Shulaev, Vladimir; Veilleux, Richard E.

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Research Directions