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End-to-end reproducible AI pipelines in radiology using the cloud Bontempi, Dennis; Nuernberg, Leonard; Pai, Suraj; Krishnaswamy, Deepa; Thiriveedhi, Vamsi; Hosny, Ahmed; Mak, Raymond H.; Farahani, Keyvan; Kikinis, Ron; Fedorov, Andrey; Aerts, Hugo J. W. L. Share Save
NCI Cancer Research Data Commons: Resources to Share Key Cancer Data Wang, Zhining; Davidsen, Tanja M.; Kuffel, Gina R.; Addepalli, Kanakadurga; Bell, Amanda; Casas-Silva, Esmeralda; Dingerdissen, Hayley; Farahani, Keyvan; Fedorov, Andrey; Gaheen, Sharon; Grossman, Robert L.; Kikinis, Ron; Kim, Erika; Otridge, John; Pihl, Todd; Porter, Melissa; Rodriguez, Henry; Staudt, Louis M.; Thangudu, Ratna R.; Venkatachari, Sudha; Zenklusen, Jean Claude; Zhang, Xu; Barnholtz-Sloan, Jill S.; Kerlavage, Anthony R. Share Save
METhodological RadiomICs Score (METRICS): a quality scoring tool for radiomics research endorsed by EuSoMII Kocak, Burak; Akinci D'Antonoli, Tugba; Mercaldo, Nathaniel; Alberich-Bayarri, Angel; Baessler, Bettina; Ambrosini, Ilaria; Andreychenko, Anna E.; Bakas, Spyridon; Beets-Tan, Regina G. H.; Bressem, Keno; Buvat, Irene; Cannella, Roberto; Cappellini, Luca Alessandro; Cavallo, Armando Ugo; Chepelev, Leonid L.; Chu, Linda Chi Hang; Demircioglu, Aydin; deSouza, Nandita M.; Dietzel, Matthias; Fanni, Salvatore Claudio; Fedorov, Andrey; Fournier, Laure S.; Giannini, Valentina; Girometti, Rossano; Groot Lipman, Kevin B. W.; Kalarakis, Georgios; Kelly, Brendan S.; Klontzas, Michail E.; Koh, Dow-Mu; Kotter, Elmar; Lee, Ho Yun; Maas, Mario; Marti-Bonmati, Luis; Muller, Henning; Obuchowski, Nancy; Orlhac, Fanny; Papanikolaou, Nikolaos; Petrash, Ekaterina; Pfaehler, Elisabeth; Pinto dos Santos, Daniel; Ponsiglione, Andrea; Sabater, Sebastia; Sardanelli, Francesco; Seeboeck, Philipp; Sijtsema, Nanna M.; Stanzione, Arnaldo; Traverso, Alberto; Ugga, Lorenzo; Vallieres, Martin; van Dijk, Lisanne V.; van Griethuysen, Joost J. M.; van Hamersvelt, Robbert W.; van Ooijen, Peter; Vernuccio, Federica; Wang, Alan; Williams, Stuart; Witowski, Jan; Zhang, Zhongyi; Zwanenburg, Alex; Cuocolo, Renato Share Save
Comparison of physics-based deformable registration methods for image-guided neurosurgery Chrisochoides, Nikos; Liu, Yixun; Drakopoulos, Fotis; Kot, Andriy; Foteinos, Panos; Tsolakis, Christos; Billias, Emmanuel; Clatz, Olivier; Ayache, Nicholas; Fedorov, Andrey; Golby, Alex; Black, Peter; Kikinis, Ron Share Save
The NCI Imaging Data Commons as a platform for reproducible research in computational pathology Schacherer, Daniela P.; Herrmann, Markus D.; Clunie, David A.; Hoefener, Henning; Clifford, William; Longabaugh, William J. R.; Pieper, Steve; Kikinis, Ron; Fedorov, Andrey; Homeyer, Andre Share Save
National Cancer Institute Imaging Data Commons: Toward Transparency, Reproducibility, and Scalability in Imaging Artificial Intelligence Fedorov, Andrey; Longabaugh, William J. R.; Pot, David; Clunie, David A.; Pieper, Steven D.; Gibbs, David L.; Bridge, Christopher; Herrmann, Markus D.; Homeyer, Andre; Lewis, Rob; Aerts, Hugo J. W. L.; Krishnaswamy, Deepa; Thiriveedhi, Vamsi Krishna; Ciausu, Cosmin; Schacherer, Daniela P.; Bontempi, Dennis; Pihl, Todd; Wagner, Ulrike; Farahani, Keyvan; Kim, Erika; Kikinis, Ron Share Save
A community-endorsed open-source lexicon for contrast agent-based perfusion MRI: A consensus guidelines report from the ISMRM Open Science Initiative for Perfusion Imaging (OSIPI) Dickie, Ben R.; Ahmed, Zaki; Arvidsson, Jonathan; Bell, Laura C.; Buckley, David L.; Debus, Charlotte; Fedorov, Andrey; Floca, Ralf; Gutmann, Ingomar; van Der Heijden, Rianne A.; van Houdt, Petra J.; Sourbron, Steven; Thrippleton, Michael J.; Quarles, Chad; Kompan, Ina N.; Perfusion Study Grp ISMRM Share Save
CheckList for EvaluAtion of Radiomics research (CLEAR): a step-by-step reporting guideline for authors and reviewers endorsed by ESR and EuSoMII Kocak, Burak; Baessler, Bettina; Bakas, Spyridon; Cuocolo, Renato; Fedorov, Andrey; Maier-Hein, Lena; Mercaldo, Nathaniel; Mueller, Henning; Orlhac, Fanny; Pinto dos Santos, Daniel; Stanzione, Arnaldo; Ugga, Lorenzo; Zwanenburg, Alex Share Save
Open-source Software Sustainability Models: Initial White Paper From the Informatics Technology for Cancer Research Sustainability and Industry Partnership Working Group Ye, Ye; Barapatre, Seemran; Davis, Michael K.; Elliston, Keith O.; Davatzikos, Christos; Fedorov, Andrey; Fillion-Robin, Jean-Christophe; Foster, Ian; Gilbertson, John R.; Lasso, Andras; Miller, James, V; Morgan, Martin; Pieper, Steve; Raumann, Brigitte E.; Sarachan, Brion D.; Savova, Guergana; Silverstein, Jonathan C.; Taylor, Donald P.; Zelnis, Joyce B.; Zhang, Guo-Qiang; Cuticchia, Jamie; Becich, Michael J. Share Save
NCI Imaging Data Commons Fedorov, Andrey; Longabaugh, William J. R.; Pot, David; Clunie, David A.; Pieper, Steve; Aerts, Hugo J. W. L.; Homeyer, Andre; Lewis, Rob; Akbarzadeh, Afshin; Bontempi, Dennis; Clifford, William; Herrmann, Markus D.; Hoefener, Henning; Octaviano, Igor; Osborne, Chad; Paquette, Suzanne; Petts, James; Punzo, Davide; Reyes, Madelyn; Schacherer, Daniela P.; Tian, Mi; White, George; Ziegler, Erik; Shmulevich, Ilya; Pihl, Todd; Wagner, Ulrike; Farahani, Keyvan; Kikinis, Ron Share Save
Adaptive Physics-Based Non-Rigid Registration for Immersive Image-Guided Neuronavigation Systems Drakopoulos, Fotis; Tsolakis, Christos; Angelopoulos, Angelos; Liu, Yixun; Yao, Chengjun; Kavazidi, Kyriaki Rafailia; Foroglou, Nikolaos; Fedorov, Andrey; Frisken, Sarah; Kikinis, Ron; Golby, Alexandra; Chrisochoides, Nikos Share Save
Quantitative Imaging Informatics for Cancer Research Fedorov, Andrey; Beichel, Reinhard; Kalpathy-Cramer, Jayashree; Clunie, David; Onken, Michael; Riesmeier, Joerg; Herz, Christian; Bauer, Christian; Beers, Andrew; Fillion-Robin, Jean-Christophe; Lasso, Andras; Pinter, Csaba; Pieper, Steve; Nolden, Marco; Maier-Hein, Klaus; Herrmann, Markus D.; Saltz, Joel; Prior, Fred; Fennessy, Fiona; Buatti, John; Kikinis, Ron Share Save
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DICOM re-encoding of volumetrically annotated Lung Imaging Database Consortium (LIDC) nodules Fedorov, Andrey; Hancock, Matthew; Clunie, David; Brochhausen, Mathias; Bona, Jonathan; Kirby, Justin; Freymann, John; Pieper, Steve; J. W. L. Aerts, Hugo; Kikinis, Ron; Prior, Fred Share Save
The Image Biomarker Standardization Initiative: Standardized Quantitative Radiomics for High-Throughput Image-based Phenotyping Zwanenburg, Alex; Vallieres, Martin; Abdalah, Mahmoud A.; Aerts, Hugo J. W. L.; Andrearczyk, Vincent; Apte, Aditya; Ashrafinia, Saeed; Bakas, Spyridon; Beukinga, Roeloff; Boellaard, Ronald; Bogowicz, Marta; Boldrini, Luca; Buvat, Irene; Cook, Gary J. R.; Davatzikos, Christos; Depeursinge, Adrien; Desseroit, Marie-Charlotte; Dinapoli, Nicola; Cuong Viet Dinh; Echegaray, Sebastian; El Naqa, Issam; Fedorov, Andriy Y.; Gatta, Roberto; Gillies, Robert J.; Goh, Vicky; Goetz, Michael; Guckenberger, Matthias; Ha, Sung Min; Hatt, Mathieu; Isensee, Fabian; Lambin, Philippe; Leger, Stefan; Leijenaar, Ralph T. H.; Lenkowicz, Jacopo; Lippert, Fiona; Losnegard, Are; Maier-Hein, Klaus H.; Morin, Olivier; Mueller, Henning; Napel, Sandy; Nioche, Christophe; Orlhac, Fanny; Pati, Sarthak; Pfaehler, Elisabeth A. G.; Rahmim, Arman; Rao, Arvind U. K.; Scherer, Jonas; Siddique, Muhammad Musib; Sijtsema, Nanna M.; Fernandez, Jairo Socarras; Spezi, Emiliano; Steenbakkers, Roel J. H. M.; Tanadini-Lang, Stephanie; Thorwarth, Daniela; Troost, Esther G. C.; Upadhaya, Taman; Valentini, Vincenzo; van Dijk, Lisanne V.; van Griethuysen, Joost; van Velden, Floris H. P.; Whybra, Philip; Richter, Christian; Loeck, Steffen Share Save
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Repeatability of Multiparametric Prostate MRI Radiomics Features Schwier, Michael; van Griethuysen, Joost; Vangel, Mark G.; Pieper, Steve; Peled, Sharon; Tempany, Clare; Aerts, Hugo J. W. L.; Kikinis, Ron; Fennessy, Fiona M.; Fedorov, Andriy Share Save
Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy Mehrtash, Alireza; Ghafoorian, Mohsen; Pernelle, Guillaume; Ziaei, Alireza; Heslinga, Friso G.; Tuncali, Kemal; Fedorov, Andriy; Kikinis, Ron; Tempany, Clare M.; Wells, William M., III; Abolmaesumi, Purang; Kapur, Tina Share Save
dcmqi: An Open Source Library for Standardized Communication of Quantitative Image Analysis Results Using DICOM Herz, Christian; Fillion-Robin, Jean-Christophe; Onken, Michael; Riesmeier, Jorg; Lasso, Andras; Pinter, Csaba; Fichtinger, Gabor; Pieper, Steve; Clunie, David; Kikinis, Ron; Fedorov, Andriy Share Save
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