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Age K. Smilde

university of amsterdam

72H-index
418Paper Count
2.7WCitation Count
Published Papers 157
Publication Date
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ACMTF-R: Supervised multi-omics data integration uncovering shared and distinct outcome-associated variation
errPLoS One
IF2.6
err2026-01-12
err1
PREAI
errvan der Ploeg, Geert Roelof; White, Fred T. G.; Jakobsen, Rasmus Riemer; Westerhuis, Johan A.; Heintz-Buschart, Anna; Smilde, Age K.
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Analysis of microbiome high-dimensional experimental design data using generalized linear models and ANOVA simultaneous component analysis
errFrontiers in Microbiomes
IF0
err2025-10-15
err0
errOAAI
errAbegaz, Fentaw; Abedini, Davar; Dong, Lemeng; Westerhuis, Johan A.; Van Eeuwijk, Fred; Bouwmeester, Harro; Smilde, Age K.
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Modelling of the Systemic Inflammatory Host Response in Relation to the Microbiome of the Endodontic Infection
errInternational Endodontic Journal
IF7.1
err2025-09-18
err0
errOAAI
errA. C. Georgiou; G. R. van der Ploeg; J. A. Westerhuis; S. V. van der Waal; A. Heintz-Buschart; A. K. Smilde; B. W. Brandt
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Shifting hormones, shaping health: Gender-affirming therapy & oral care
errInternational Journal of Transgender Health
IF14.8
err2025-09-05
err0
errOAAI
errP.E. Cornejo Ulloa; G.R. van der Ploeg; A. Heintz-Buschart; J.A. Westerhuis; A.K. Smilde; E. Zaura; B.W. Brandt; M.J. Buijs; N. Bostanci; A. Silbereisen; F.J. Bikker; K. Nazmi; M. Tebbens; M. den Heijer; B.P. Krom; M.H. van der Veen
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All sparse PCA models are wrong, but some are useful. Part III: Model interpretation
errChemometrics and Intelligent Laboratory Systems
IF3.8
err2025-08-12
err0
errOAAI
errJ. Camacho; A.K. Smilde; E. Saccenti; J.A. Westerhuis; R. Bro
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The chemical interaction between plants and the rhizosphere microbiome
errTrends in Plant Science
IF20.8
err2025-07-01
err0
errOAAI
errHarro Bouwmeester; Lemeng Dong; Kathrin Wippel; Twan Hofland; Age Smilde
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parafac4microbiome: exploratory analysis of longitudinal microbiome data using parallel factor analysis
errMSYSTEMS
IF4.6
err2025-06-17
err0
errOAAI
errvan der Ploeg, G. R.; Westerhuis, J. A.; Heintz-Buschart, A.; Smilde, A. K.
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Longitudinal Metabolomics Data Analysis Informed by Mechanistic Models
errMETABOLITES
IF3.7
err2024-12-24
err0
errOAAI
errLi, Lu; Hoefsloot, Huub; Bakker, Barbara M.; Horner, David; Rasmussen, Morten A.; Smilde, Age K.; Acar, Evrim
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Multi-way modelling of oral microbial dynamics and host-microbiome interactions during induced gingivitis
errNPJ BIOFILMS AND MICROBIOMES
IF9.2
err2024-09-19
err0
errOAAI
errvan der Ploeg, G. R.; Brandt, B. W.; Keijser, B. J. F.; van der Veen, M. H.; Volgenant, C. M. C.; Zaura, E.; Smilde, A. K.; Westerhuis, J. A.; Heintz-Buschart, A.
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Revealing static and dynamic biomarkers from postprandial metabolomics data through coupled matrix and tensor factorizations
errMETABOLOMICS
IF3.3
err2024-07-27
err1
errOAAI
errLi, Lu; Yan, Shi; Horner, David; Rasmussen, Morten A.; Smilde, Age K.; Acar, Evrim
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A strategy for differential abundance analysis of sparse microbiome data with group-wise structured zeros
errSCIENTIFIC REPORTS
IF3.9
err2024-05-30
err1
errOAAI
errAbegaz, Fentaw; Abedini, Davar; White, Fred; Guerrieri, Alessandra; Zancarini, Anouk; Dong, Lemeng; Westerhuis, Johan A.; van Eeuwijk, Fred; Bouwmeester, Harro; Smilde, Age K.
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Characterizing human postprandial metabolic response using multiway data analysis
errMETABOLOMICS
IF3.3
err2024-05-09
err3
errOAAI
errYan, Shi; Li, Lu; Horner, David; Ebrahimi, Parvaneh; Chawes, Bo; Dragsted, Lars O.; Rasmussen, Morten A.; Smilde, Age K.; Acar, Evrim
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Corruption of the Pearson correlation coefficient by measurement error and its estimation, bias, and correction under different error models (vol 10, 438, 2020)
errSCIENTIFIC REPORTS
IF3.9
err2023-12-20
err2
errOAAI
errSaccenti, Edoardo; Hendriks, Margriet H. W. B.; Smilde, Age K.
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Novel Connections of Common Childhood Illnesses Based on More Than 5 Million Diary Registrations From Birth Until Age 3 Years
errJOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY-IN PRACTICE
IF6.6
err2023-07-01
err1
PREAI
errNorgaard, Sarah Kristine; Folsgaard, Nilo; Vissing, Nadja Hawwa; Kyvsgaard, Julie Nyholm; Chawes, Bo; Stokholm, Jakob; Smilde, Age K.; Bonnelykke, Klaus; Bisgaard, Hans; Rasmussen, Morten Arendt
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Unsupervised EHR-based phenotyping via matrix and tensor decompositions
errWILEY INTERDISCIPLINARY REVIEWS-DATA MINING AND KNOWLEDGE DISCOVERY
IF11.7
err2023-03-05
err4
errOAAI
errBecker, Florian; Smilde, Age K.; Acar, Evrim
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Critical evaluation of assessor difference correction approaches in sensory analysis
errFOOD QUALITY AND PREFERENCE
IF4.9
err2023-02-01
err1
errOAAI
errGrossmann, Justus L.; Westerhuis, Johan A.; Naes, Tormod; Smilde, Age K.
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Flavor Profiling Using Comprehensive Mass Spectrometry Analysis of Metabolites in Tomato Soups
errMETABOLITES
IF3.7
err2022-11-29
err3
errOAAI
errLeygeber, Simon; Grossmann, Justus L. L.; Diez-Simon, Carmen; Karu, Naama; Dubbelman, Anne-Charlotte; Harms, Amy C. C.; Westerhuis, Johan A. A.; Jacobs, Doris M. M.; Lindenburg, Peter W. W.; Hendriks, Margriet M. W. B.; Ammerlaan, Brenda C. H.; van den Berg, Marco A. A.; van Doorn, Rudi; Mumm, Roland; Hall, Robert D. D.; Smilde, Age K. K.; Hankemeier, Thomas
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Gut Microbiome and Its Cofactors Are Linked to Lipoprotein Distribution Profiles
errMICROORGANISMS
IF4.2
err2022-10-31
err6
errOAAI
errCastro-Mejia, Josue L.; Khakimov, Bekzod; Aru, Violetta; Lind, Mads V.; Garne, Eva; Paulova, Petronela; Tavakkoli, Elnaz; Hansen, Lars H.; Smilde, Age K.; Holm, Lars; Engelsen, Soren B.; Nielsen, Dennis S.
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Effect of strigolactones on recruitment of the rice root-associated microbiome
errFEMS MICROBIOLOGY ECOLOGY
IF3.2
err2022-02-08
err54
errOAAI
errKim, Bora; Westerhuis, Johan A.; Smilde, Age K.; Flokova, Kristyna; Suleiman, Afnan K. A.; Kuramae, Eiko E.; Bouwmeester, Harro J.; Zancarini, Anouk
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Human Blood Lipoprotein Predictions from 1H NMR Spectra: Protocol, Model Performances, and Cage of Covariance
errANALYTICAL CHEMISTRY
IF6.7
err2021-12-22
err10
errOAAI
errKhakimov, Bekzod; Hoefsloot, Huub C. J.; Mobaraki, Nabiollah; Aru, Violetta; Kristensen, Mette; Lind, Mads, V; Holm, Lars; Castro-Mejia, Josue L.; Nielsen, Dennis S.; Jacobs, Doris M.; Smilde, Age K.; Engelsen, Soren Balling
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Research Directions

No research directions
Co-authors
Cooperation Journals
A
Arne Astrup
H-index: 140 · Papers: 1.3K
B
Bart N. Lambrecht
H-index: 123 · Papers: 760
D
Douglas B. Kell
H-index: 121 · Papers: 845
L
Luc J. C. van Loon
H-index: 114 · Papers: 745
R
Robert A. Berg
H-index: 112 · Papers: 890
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