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Thomas W. Burke

duke university

63H-index
340Paper Count
1.3WCitation Count
Published Papers 70
Publication Date
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Innate immune responsiveness predicts enhanced cellular immunity and symptomatic disease after controlled human influenza infection
errNature Medicine
IF50
err2026-07-01
err0
errOAAI
errLoukas Papargyris; Jiayun Xu; Claire Broderick; Ao Huang; Trupti Gore; Arnold Reynaldi; Pete Dayananda; Ashley M. Collins; Stephanie Ascough; Nathan Wong; Jon Guy; Jihye Song; Satwik Kar; Emma Bergstrom; Lydia Slater; Zoe Gardener; Suzanna Paterson; Mahdi Moradi Marjaneh; Samuel J. Nichols; Victoria J. Wright; Min Kyu Park; Richard McKendry; Brad Nicholson; Micah McClain; Thomas W. Burke; Helen Wagstaffe; Jelle Klein; Michael Levin; Alba Grifoni; Christopher W. Woods; Miles P. Davenport; John S. Tsang; Benny Chain; Myrsini Kaforou; Christopher Chiu
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errSave
Host gene expression in the Nasopharynx can discriminate microbiologically confirmed viral and bacterial lower respiratory tract infection
errJournal of Clinical and Translational Science
IF2
err2025-10-29
err0
errOAAI
errTillekeratne, L. Gayani; O'grady, Nicholas; Iglesias-Ussel, Maria D.; Anderson, Jack; Brown, Alana; Obale, Armstrong; Nix, Christina; Bodinayake, Champica K.; Nagahawatte, Ajith; Rolfe, Robert; Woodhouse, E. Wilbur; Wijayaratne, Gaya B.; Weerasinghe, Senali; Dilshan, U. H. B. Y.; Gamage, Jayani; Kurukulasooriya, Ruvini; Premamali, Madureka; Jayasinghearachchi, Himali S.; Nicholson, Bradly P.; Ko, Emily R.; Tsalik, Ephraim L.; Mcclain, Micah T.; Myers, Rachel A.; Woods, Christopher W.; Burke, Thomas W.
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errSave
Pediatric T cell and B cell responses to SARS-CoV-2 infection
errJCI INSIGHT
IF6.1
err2025-10-22
err0
errOAAI
errHills, L. Benjamin; Bhat, Numana; Hurst, Jillian H.; Myers, Amber; Burke, Thomas W.; Mcclain, Micah T.; Petzold, Elizabeth; Rotta, Alexandre T.; Turner, Nicholas A.; Grifoni, Alba; Weiskopf, Daniela; Dogariu, Yvonne; Fouda, Genevieve G.; Permar, Sallie R.; Sette, Alessandro; Woods, Christopher W.; Kelly, Matthew S.; Crotty, Shane
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errSave
Innate immune molecular landscape following controlled human influenza virus infection
errCell Reports
IF6.9
err2025-09-16
err0
PREAI
errWilliam Thistlethwaite; Sindhu Vangeti; Wan-Sze Cheng; Pankaj Agarwal; Antonio Cappuccio; Wenliang Wang; Bei Wei; Rachel Myers; Aliza B. Rubenstein; Daniel Chawla; Manoj Hariharan; Micah T. McClain; Thomas W. Burke; Steven H. Kleinstein; Joseph R. Ecker; Christopher W. Woods; William J. Greenleaf; Xi Chen; Irene Ramos; Elena Zaslavsky; Thomas G. Evans; Olga G. Troyanskaya; Stuart C. Sealfon
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errSave
Molecular dynamics of the host response to Streptococcus pneumoniae pneumonia in baboons
errAnimal Models and Experimental Medicine
IF3.4
err2025-09-14
err0
errOAAI
errBryan D. Kraft; Ashlee M. Valente; Ephraim L. Tsalik; Micah T. McClain; Marshall Nichols; Thomas W. Burke; Ricardo Henao; Erik J. Soderblom; J. Will Thompson; M. Arthur Moseley; Lori L. Hudson; Timothy Veldman; Olga M. Better; Mert Aydin; Anna Mazur; Karen E. Welty-Wolf; Claude A. Piantadosi; Geoffrey S. Ginsburg; Christopher W. Woods
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errSave
Patient-Reported Outcomes for Patients With Metastatic NSCLC Treated at an Academic Medical Center, 2017–2021
errCancer Medicine
IF3.1
err2025-08-01
err0
errOAAI
errLoretta A. Williams; Cai Xu; Darcy A. Ponce; Qiuling Shi; Melissa L. Santorelli; Thomas Burke; Mehmet Altan
errShare
errSave
Feasibility of evaluating AI-enabled digital symptom monitoring in metastatic patients with NSCLC receiving pembrolizumab therapy: A German single-arm observational pilot study
errlancet digital health
IF3.3
err2025-07-15
err0
errOAAI
errMelissa L. Santorelli; Oliver Schmalz; Mathias Hoiczyk; David Heigener; Clemens Schulte; Markus Knott; Petra Hoffknecht; Joonas Vainio; Thomas Burke; Josephine M. Norquist; Sabine Riehl; Alexander Hildner; Lisa Barthuber; Sabine Bohnet
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errSave
Age-associated differences in mucosal and systemic host responses to SARS-CoV-2 infection
errNATURE COMMUNICATIONS
IF15.7
err2025-03-10
err0
errOAAI
errHurst, Jillian H.; Mohan, Aditya A.; Dalapati, Trisha; George, Ian A.; Aquino, Jhoanna N.; Lugo, Debra J.; Pfeiffer, Trevor S.; Rodriguez, Javier; Rotta, Alexandre T.; Turner, Nicholas A.; Burke, Thomas W.; Mcclain, Micah T.; Henao, Ricardo; Demarco, C. Todd; Louzao, Raul; Denny, Thomas N.; Walsh, Kyle M.; Xu, Zhaohui; Mejias, Asuncion; Ramilo, Octavio; Woods, Christopher W.; Kelly, Matthew S.
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errSave
A Rapid Host Response Blood Test for Bacterial/Viral Infection Discrimination Using a Portable Molecular Diagnostic Platform
errOPEN FORUM INFECTIOUS DISEASES
IF3.8
err2024-12-11
err0
errOAAI
errIglesias-Ussel, Maria D.; O'Grady, Nicholas; Anderson, Jack; Mitsis, Paul G.; Burke, Thomas W.; Henao, Ricardo; Scavetta, Joseph; Camilleri, Clare; Naderi, Sepideh; Carittini, Amanda; Perelman, Max; Myers, Rachel A.; Ginsburg, Geoffrey S.; Ko, Emily R.; Mcclain, Micah T.; van Westrienen, Jesse; Tsalik, Ephraim L.; Tillekeratne, L. Gayani; Woods, Christopher W.
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errSave
Dynamics of cytokine and antibody responses in community versus hospital SARS-CoV-2 infections
errFRONTIERS IN IMMUNOLOGY
IF5.9
err2024-11-22
err0
errOAAI
errSingh, Tulika; Macintyre, Andrew N.; Burke, Thomas W.; Anderson, Jack; Petzold, Elizabeth; Stover, Erica L.; French, Matthew J.; Oguin III, Thomas H.; Demarco, Todd; Mcclain, Micah T.; Ko, Emily R.; Park, Lawrence P.; Denny, Thomas; Sempowski, Gregory D.; Woods, Christopher W.
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errSave
Integrated epigenomic exposure signature discovery
errEPIGENOMICS
IF2.6
err2024-09-03
err1
errOAAI
errSchuetter, Jared; Minard-Smith, Angela; Hill, Brandon; Beare, Jennifer L.; Vornholt, Alexandria; Burke, Thomas W.; Murugan, Vel; Smith, Anthony K.; Chandrasekaran, Thiruppavai; Shamma, Hiba J.; Kahaian, Sarah C.; Fillinger, Keegan L.; Amper, Mary Anne S.; Cheng, Wan-Sze; Ge, Yongchao; George, Mary Catherine; Guevara, Kristy; Lovette-Okwara, Nora; Mahajan, Avinash; Marjanovic, Nada; Mendelev, Natalia; Fowler Jr, Vance G.; McClain, Micah T.; Miller, Clare M.; Mofsowitz, Sagie; Nair, Venugopalan D.; Nudelman, German; Evans, Thomas G.; Castellino, Flora; Ramos, Irene; Rirak, Stas; Ruf-Zamojski, Frederique; Seenarine, Nitish; Soares-Shanoski, Alessandra; Vangeti, Sindhu; Vasoya, Mital; Yu, Xuechen; Zaslavsky, Elena; Ndhlovu, Lishomwa C.; Corley, Michael J.; Bowler, Scott; Deeks, Steven G.; Letizia, Andrew G.; Sealfon, Stuart C.; Woods, Christopher W.; Spurbeck, Rachel R.
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Implementation of a Prospective Index-Cluster Sampling Strategy for the Detection of Presymptomatic Viral Respiratory Infection in Undergraduate Students
errOPEN FORUM INFECTIOUS DISEASES
IF3.8
err2024-02-14
err0
errOAAI
errUthappa, Diya M.; McClain, Micah T.; Nicholson, Bradly P.; Park, Lawrence P.; Zhbannikov, Ilya; Suchindran, Sunil; Jimenez, Monica; Constantine, Florica J.; Nichols, Marshall; Jones, Daphne C.; Hudson, Lori L.; Jaggers, L. Brett; Veldman, Timothy; Burke, Thomas W.; Tsalik, Ephraim L.; Ginsburg, Geoffrey S.; Woods, Christopher W.
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errSave
Host-response transcriptional biomarkers accurately discriminate bacterial and viral infections of global relevance
errSCIENTIFIC REPORTS
IF3.9
err2023-12-18
err3
errOAAI
errKo, Emily R.; Reller, Megan E.; Tillekeratne, L. Gayani; Bodinayake, Champica K.; Miller, Cameron; Burke, Thomas W.; Henao, Ricardo; Mcclain, Micah T.; Suchindran, Sunil; Nicholson, Bradly; Blatt, Adam; Petzold, Elizabeth; Tsalik, Ephraim L.; Nagahawatte, Ajith; Devasiri, Vasantha; Rubach, Matthew P.; Maro, Venance P.; Lwezaula, Bingileki F.; Kodikara-Arachichi, Wasantha; Kurukulasooriya, Ruvini; De Silva, Aruna D.; Clark, Danielle V.; Schully, Kevin L.; Madut, Deng; Dumler, J. Stephen; Kato, Cecilia; Galloway, Renee; Crump, John A.; Ginsburg, Geoffrey S.; Minogue, Timothy D.; Woods, Christopher W.
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errSave
Mast cell activation in lungs during SARS-CoV-2 infection associated with lung pathology and severe COVID-19
errJOURNAL OF CLINICAL INVESTIGATION
IF13.6
err2023-10-02
err13
errOAAI
errTan, Janessa Y. J.; Anderson, Danielle E.; Rathore, Abhay P. S.; O'Neill, Aled; Mantri, Chinmay Kumar; Saron, Wilfried A. A.; Lee, Cheryl Q. E.; Cui, Chu Wern; Kang, Adrian E. Z.; Foo, Randy; Kalimuddin, Shirin; Low, Jenny G.; Ho, Lena; Tambyah, Paul; Burke, Thomas W.; Woods, Christopher W.; Chan, Kuan Rong; Karhausen, Jorn; St John, Ashley L.
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errSave
METABOLOMIC BIOMARKERS PREDICT MAJOR ADVERSE CARDIOVASCULAR EVENTS, LONG-TERM POST-COVID CONDITIONS, AND DEATH IN PATIENTS WITH COVID-19
errCHEST
IF8.6
err2023-10-01
err0
errOAAI
errCorey, Kristin; Kwee, Lydia; Anderson, Jack; Burke, Thomas; Chen, Lingye; Que, Loretta G.; Patel, Manesh; Woods, Christopher; Shah, Svati
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errSave
Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion (vol 12, 11714, 2022)
errSCIENTIFIC REPORTS
IF3.9
err2023-04-20
err0
errOAAI
errGiroux, Nicholas S.; Ding, Shengli; McClain, Micah T.; Burke, Thomas W.; Petzold, Elizabeth; Chung, Hong A.; Rivera, Grecia O.; Wang, Ergang; Xi, Rui; Bose, Shree; Rotstein, Tomer; Nicholson, Bradly P.; Chen, Tianyi; Henao, Ricardo; Sempowski, Gregory D.; Denny, Thomas N.; De Ussel, Maria Iglesias; Satterwhite, Lisa L.; Ko, Emily R.; Ginsburg, Geoffrey S.; Kraft, Bryan D.; Tsalik, Ephraim L.; Shen, Xiling; Woods, Christopher W.
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errSave
COVID-19 Diagnosis and SARS-CoV-2 Strain Identification by a Rapid, Multiplexed, Point-of-Care Antibody Microarray
errANALYTICAL CHEMISTRY
IF6.7
err2023-03-24
err6
errOAAI
errHeggestad, Jacob T.; Britton, Rhett J.; Kinnamon, David S.; Liu, Jason; Anderson, Jack G.; Joh, Daniel Y.; Quinn, Zachary; Fontes, Cassio M.; Hucknall, Angus M.; Parks, Robert; Sempowski, Gregory D.; Denny, Thomas N.; Burke, Thomas W.; Haynes, Barton F.; Woods, Christopher W.; Chilkoti, Ashutosh
errShare
errSave
Blood RNA alternative splicing events as diagnostic biomarkers for infectious disease
errCELL REPORTS METHODS
IF4.5
err2023-02-01
err3
errOAAI
errZhang, Zijun; Sauerwald, Natalie; Cappuccio, Antonio; Ramos, Irene; Nair, Venugopalan D.; Nudelman, German; Zaslavsky, Elena; Ge, Yongchao; Gaitas, Angelo; Ren, Hui; Brockman, Joel; Geis, Jennifer; Ramalingam, Naveen; King, David; McClain, Micah T.; Woods, Christopher W.; Henao, Ricardo; Burke, Thomas W.; Tsalik, Ephraim L.; Goforth, Carl W.; Lizewski, Rhonda A.; Lizewski, Stephen E.; Weir, Dawn L.; Letizia, Andrew G.; Sealfon, Stuart C.; Troyanskaya, Olga G.
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errSave
Pre-exposure cognitive performance variability is associated with severity of respiratory infection
errSCIENTIFIC REPORTS
IF3.9
err2022-12-30
err1
errOAAI
errZhai, Yaya; Doraiswamy, P. Murali; Woods, Christopher W.; Turner, Ronald B.; Burke, Thomas W.; Ginsburg, Geoffrey S.; Hero, Alfred O.
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errSave
Multi-objective optimization identifies a specific and interpretable COVID-19 host response signature
errCELL SYSTEMS
IF7.7
err2022-12-01
err3
errOAAI
errCappuccio, Antonio; Chawla, Daniel G.; Chen, Xi; Rubenstein, Aliza B.; Cheng, Wan Sze; Mao, Weiguang; Burke, Thomas W.; Tsalik, Ephraim L.; Petzold, Elizabeth; Henao, Ricardo; McClain, Micah T.; Woods, Christopher W.; Chikina, Maria; Troyanskaya, Olga G.; Sealfon, Stuart C.; Kleinstein, Steven H.; Zaslavsky, Elena
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Research Directions

No research directions
Co-authors
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