Alexander E. Lipka - Publications, H-index & Citations

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Alexander E. Lipka

University of Illinois System

43H-index

179Paper Count

8.8KCitation Count

Published Papers 71

Publication Date

Do we need to account for genetic architecture when applying genomic prediction to perennialized sorghum?

Euphytica

IF1.7

2026-02-21

PREAI

Widener-Richards, Sarah J.; Nabukalu, Phenoah; Kong, Wenqian; Paterson, Andrew H.; Cox, Stan; Sacks, Erik J.; Lipka, Alexander E.

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High-Throughput Screen of NPQ in Sorghum Shows Highly Polygenic Architecture of Photoprotection

PLANTENVIRONMENT INTERACTIONS

IF0

2026-01-11

OAAI

Vath, Richard L.; Fernandes, Samuel B.; Monier, Brandon; Glowacka, Katarzyna; Walter, Julia; Lipka, Alexander E.; Ferguson, John; Bernacchi, Carl J.; Pederson, Taylor; Kromdijk, Johannes

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Vascular Pathogenicity of Xanthomonas vasicola pv. vasculorum in Maize Is Modulated by Tissue-Specific Host Resistance

Phytopathology

IF3.1

2026-01-01

PREAI

Mullens, Alexander; Zhong, Tao; Lipka, Alexander; Balint-Kurti, Peter; Jamann, Tiffany

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Optimizing population simulations to accurately parallel empirical data for digital breeding

Crop Science

IF1.9

2026-01-01

OAAI

Burns, Michael J.; Della Coletta, Rafael; Fernandes, Samuel B.; Bohn, Martin O.; Lipka, Alexander E.; Hirsch, Candice N.

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Genomic selection and reproducibility: are complex models distracting us from true scientific validity in the presence of genotype-by-environment interaction?

G3-GENES GENOMES GENETICS

IF2.2

2025-11-01

OAAI

Howard, Reka; Lipka, Alexander E.

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Mean and variance heterogeneity loci impact kernel compositional traits in maize

The Plant Genome

IF0

2025-10-09

OAAI

Yasser M. A. Ismail; Christopher Mujjabi; Marcus O. Olatoye; Stephen Gray; Alexander E. Lipka; Martin O. Bohn

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Regulatory variation controlling architectural pleiotropy in maize

NATURE COMMUNICATIONS

IF15.7

2025-03-03

OAAI

Bertolini, Edoardo; Rice, Brian R.; Braud, Max; Yang, Jiani; Hake, Sarah; Strable, Josh; Lipka, Alexander E.; Eveland, Andrea L.

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Rare variants in crops: theoretical insights and emerging detection strategies

IN SILICO PLANTS

IF2.4

2025-01-01

OAAI

Floriani, Talissa; Lipka, Alexander E.

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Genomic prediction of cereal crop architectural traits using models informed by gene regulatory circuitries from maize

GENETICS

IF5.1

2024-10-23

OAAI

Bertolini, Edoardo; Manjunath, Mohith; Ge, Weihao; Murphy, Matthew D.; Inaoka, Mirai; Fliege, Christina; Eveland, Andrea L.; Lipka, Alexander E.

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Crop modeling suggests limited transpiration would increase yield of sorghum across drought-prone regions of the United States

FRONTIERS IN PLANT SCIENCE

IF4.8

2024-01-29

OAAI

Raymundo, Rubi; Mclean, Greg; Sexton-Bowser, Sarah; Lipka, Alexander E.; Morris, Geoffrey P.

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Current challenges and future of agricultural genomes to phenomes in the USA

GENOME BIOLOGY

IF9.4

2024-01-03

OAAI

Tuggle, Christopher K.; Clarke, Jennifer L.; Murdoch, Brenda M.; Lyons, Eric; Scott, Nicole M.; Benes, Bedrich; Campbell, Jacqueline D.; Chung, Henri; Daigle, Courtney L.; Das Choudhury, Sruti; Dekkers, Jack C. M.; Dorea, Joao R. R.; Ertl, David S.; Feldman, Max; Fragomeni, Breno O.; Fulton, Janet E.; Guadagno, Carmela R.; Hagen, Darren E.; Hess, Andrew S.; Kramer, Luke M.; Lawrence-Dill, Carolyn J.; Lipka, Alexander E.; Luebberstedt, Thomas; Mccarthy, Fiona M.; Mckay, Stephanie D.; Murray, Seth C.; Riggs, Penny K.; Rowan, Troy N.; Sheehan, Moira J.; Steibel, Juan P.; Thompson, Addie M.; Thornton, Kara J.; Van Tassell, Curtis P.; Schnable, Patrick S.

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Genotype by environment model predictive ability in Miscanthus

GLOBAL CHANGE BIOLOGY BIOENERGY

IF4.1

2023-12-11

OAAI

Widener, Sarah; Njuguna, Joyce N.; Clark, Lindsay V.; Anzoua, Kossonou G.; Bagmet, Larisa; Chebukin, Pavel; Dwiyanti, Maria S.; Dzyubenko, Elena; Dzyubenko, Nicolay; Ghimire, Bimal Kumar; Jin, Xiaoli; Jorgensen, Uffe; Kjeldsen, Jens Bonderup; Nagano, Hironori; Peng, Junhua; Petersen, Karen Koefoed; Sabitov, Andrey; Seong, Eun Soo; Yamada, Toshihiko; Yoo, Ji Hye; Yu, Chang Yeon; Zhao, Hua; Jarquin, Diego; Sacks, Erik; Lipka, Alexander E.

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Impact of genotype-calling methodologies on genome-wide association and genomic prediction in polyploids

PLANT GENOME

IF3.8

2023-10-30

OAAI

Njuguna, Joyce N.; Clark, Lindsay V.; Lipka, Alexander E.; Anzoua, Kossonou G.; Bagmet, Larisa; Chebukin, Pavel; Dwiyanti, Maria S.; Dzyubenko, Elena; Dzyubenko, Nicolay; Ghimire, Bimal Kumar; Jin, Xiaoli; Johnson, Douglas A.; Kjeldsen, Jens Bonderup; Nagano, Hironori; Oliveira, Ivone de Bem; Peng, Junhua; Petersen, Karen Koefoed; Sabitov, Andrey; Seong, Eun Soo; Yamada, Toshihiko; Yoo, Ji Hye; Yu, Chang Yeon; Zhao, Hua; Munoz, Patricio; Long, Stephen P.; Sacks, Erik J.

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Inhibition of ethylene involved in resistance to E. turcicum in an exotic-derived double haploid maize population

FRONTIERS IN PLANT SCIENCE

IF4.8

2023-10-06

OAAI

Lipps, Sarah; Lipka, Alexander E.; Mideros, Santiago; Jamann, Tiffany

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Genome-wide association and genomic prediction for yield and component traits of Miscanthus sacchariflorus

GLOBAL CHANGE BIOLOGY BIOENERGY

IF4.1

2023-09-08

OAAI

Njuguna, Joyce N.; Clark, Lindsay V.; Lipka, Alexander E.; Anzoua, Kossonou G.; Bagmet, Larisa; Chebukin, Pavel; Dwiyanti, Maria S.; Dzyubenko, Elena; Dzyubenko, Nicolay; Ghimire, Bimal Kumar; Jin, Xiaoli; Johnson, Douglas A.; Nagano, Hironori; Peng, Junhua; Petersen, Karen Koefoed; Sabitov, Andrey; Seong, Eun Soo; Yamada, Toshihiko; Yoo, Ji Hye; Yu, Chang Yeon; Zhao, Hua; Long, Stephen P.; Sacks, Erik J.

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A first look at the ability to use genomic prediction for improving the ratooning ability of sugarcane

FRONTIERS IN PLANT SCIENCE

IF4.8

2023-08-02

OAAI

Islam, Md. Sariful; Corak, Keo; McCord, Per; Hulse-Kemp, Amanda M.; Lipka, Alexander E.

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Genome-wide association analysis for emergence of deeply sown rice (Oryza sativa) reveals novel aus-specific phytohormone candidate genes for adaptation to dry-direct seeding in the field

FRONTIERS IN PLANT SCIENCE

IF4.8

2023-06-12

OAAI

Sakhale, Sandeep A.; Yadav, Shailesh; Clark, Lindsay V.; Lipka, Alexander E.; Kumar, Arvind; Sacks, Erik J.

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Linking genetic and environmental factors through marker effect networks to understand trait plasticity

GENETICS

IF5.1

2023-05-29

OAAI

Della Coletta, Rafael; Liese, Sharon E.; Fernandes, Samuel B.; Mikel, Mark A.; Bohn, Martin O.; Lipka, Alexander E.; Hirsch, Candice N.

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Exome-wide variation in a diverse barley panel reveals genetic associations with ten agronomic traits in Eastern landraces

JOURNAL OF GENETICS AND GENOMICS

IF7.1

2023-04-01

OAAI

Kim, June-Sik; Takahagi, Kotaro; Inoue, Komaki; Shimizu, Minami; Uehara-Yamaguchi, Yukiko; Kanatani, Asaka; Saisho, Daisuke; Nishii, Ryuei; Lipka, Alexander E.; Hirayama, Takashi; Sato, Kazuhiro; Mochida, Keiichi

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Reductions in leaf area index, pod production, seed size, and harvest index drive yield loss to high temperatures in soybean

JOURNAL OF EXPERIMENTAL BOTANY

IF5.7

2022-12-26

OAAI

Burroughs, Charles H.; Montes, Christopher M.; Moller, Christopher A.; Mitchell, Noah G.; Michael, Anne Marie; Peng, Bin; Kimm, Hyungsuk; Pederson, Taylor L.; Lipka, Alexander E.; Bernacchi, Carl J.; Guan, Kaiyu; Ainsworth, Elizabeth A.

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Research Directions