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J

John M. Archibald

Dalhousie University

59H-index
265Paper Count
1.3WCitation Count
Published Papers 121
Publication Date
Persistent mirusvirus infection in the marine protist Aurantiochytrium
err2025-11-11
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errOAAI
errDudley Chung; Nikolaj Brask; Sari Matar; Lucie Gallot-Lavallée; Eric S. Pringle; Brett A. Duguay; Cédric Blais; Jessica Latimer; Ronie Haro; Claudio H. Slamovits; Ben Leyland; Joshua S. Rest; Jackie L. Collier; Craig McCormick; John M. Archibald
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The Biodiversity Cell Atlas: mapping the tree of life at cellular resolution
errNature
IF48.5
err2025-09-24
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PREAI
errArnau Sebé-Pedrós; Amos Tanay; Mara K. N. Lawniczak; Detlev Arendt; Stein Aerts; John Archibald; Maria Ina Arnone; Mark Blaxter; Phillip Cleves; Susana M. Coelho; Mafalda Dias; Casey Dunn; Anamaria Elek; Jonathan Frazer; Toni Gabaldón; Jesse Gillis; Xavier Grau-Bové; Roderic Guigó; Oliver Hobert; Jaime Huerta-Cepas; Manuel Irimia; Allon Klein; Harris Lewin; Christopher J. Lowe; Heather Marlow; Jacob M. Musser; László G. Nagy; Sebastián R. Najle; Lior Pachter; Sadye Paez; Irene Papatheodorou; Michael J. Passalacqua; Nikolaus Rajewsky; Seung Y. Rhee; Thomas A. Richards; Tatjana Sauka-Spengler; Lauren M. Saunders; Eve Seuntjens; Jordi Solana; Yuyao Song; Ulrich Technau; Bo Wang
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Pangenome biology and evolution in harmful algal-bloom-forming pelagophytes
err2025-08-18
err0
PREAI
errShannon J. Sibbald; Maggie Lawton; Charlotte Maclean; Andrew J. Roger; John M. Archibald
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Protist genomics: key to understanding eukaryotic evolution
err2025-06-13
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errOAAI
errAlexandra Schoenle; Ore Francis; John M. Archibald; Fabien Burki; Jan de Vries; Kenneth Dumack; Laura Eme; Isabelle Florent; Elisabeth Hehenberger; Tarja T. Hoffmeyer; Iker Irisarri; Enrique Lara; Michelle M. Leger; Julius Lukeš; Ramon Massana; Varsha Mathur; Frank Nitsche; Jürgen F.H. Strassert; Alexandra Z. Worden; Vyacheslav Yurchenko; Javier del Campo; Ann-Marie Waldvogel
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The fate of artificial transgenes in Acanthamoeba castellanii
err2025-04-13
err0
errOAAI
errColp, Morgan J.; Blais, Cedric; Curtis, Bruce A.; Archibald, John M.
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Metagenomics reveals the genetic diversity between sublineages of UCYN-A and their algal host plastids
err2024-12-04
err0
errOAAI
errKantor, Ella Joy H.; Robicheau, Brent M.; Tolman, Jennifer; Archibald, John M.; Laroche, Julie
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A unique symbiosome in an anaerobic single-celled eukaryote
err2024-11-09
err0
errOAAI
errJerlstrom-Hultqvist, Jon; Gallot-Lavallee, Lucie; Salas-Leiva, Dayana E.; Curtis, Bruce A.; Zahonova, Kristina; Cepicka, Ivan; Stairs, Courtney W.; Pipaliya, Shweta; Dacks, Joel B.; Archibald, John M.; Roger, Andrew J.
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Marine microbiology: How to evolve a nitrogen-fixing organelle
err2024-09-01
err0
PREAI
errLaRoche, Julie; Archibald, John M.
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Influenza A virus NS1 effector domain is required for PA-X-mediated host shutoff in infected cells
err2024-05-14
err3
errOAAI
errBougon, Juliette; Kadijk, Eileigh; Gallot-Lavallee, Lucie; Curtis, Bruce A.; Landers, Matthew; Archibald, John M.; Khaperskyy, Denys A.
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The protist Aurantiochytrium has universal subtelomeric rDNAs and is a host for mirusviruses
err2023-12-01
err5
errOAAI
errCollier, Jackie L.; Rest, Joshua S.; Gallot-Lavallee, Lucie; Lavington, Erik; Kuo, Alan; Jenkins, Jerry; Plott, Chris; Pangilinan, Jasmyn; Daum, Chris; Grigoriev, Igor V.; Filloramo, Gina V.; Vanclova, Anna M. G. Novak; Archibald, John M.
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Massive intein content in Anaeramoeba reveals aspects of intein mobility in eukaryotes
err2023-11-29
err0
errOAAI
errGallot-Lavallee, Lucie; Jerlstroem-Hultqvist, Jon; Zegarra-Vidarte, Paula; Salas-Leiva, Dayana E.; Stairs, Courtney W.; Cepicka, Ivan; Roger, Andrew J.; Archibald, John M.
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Horizontal Gene Transfer and Fusion Spread Carotenogenesis Among Diverse Heterotrophic Protists
err2023-02-20
err4
errOAAI
errRius, Mariana; Rest, Joshua S.; Filloramo, Gina, V; Vanclova, Anna M. G. Novak; Archibald, John M.; Collier, Jackie L.
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A phylogenomically informed five-order system for the closest relatives of land plants
err2022-10-01
err59
errOAAI
errHess, Sebastian; Williams, Shelby K.; Busch, Anna; Irisarri, Iker; Delwiche, Charles F.; de Vries, Sophie; Darienko, Tatyana; Roger, Andrew J.; Archibald, John M.; Buschmann, Henrik; von Schwartzenberg, Klaus; de Vries, Jan
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Chromosome-scale assemblies of Acanthamoeba castellanii genomes provide insights into Legionella pneumophila infection-related chromatin reorganization
err2022-09-15
err17
errOAAI
errMatthey-Doret, Cyril; Colp, Morgan J. J.; Escoll, Pedro; Thierry, Agnes; Moreau, Pierrick; Curtis, Bruce; Sahr, Tobias; Sarrasin, Matt; Gray, Michael W. W.; Lang, B. Franz; Archibald, John M. M.; Buchrieser, Carmen; Koszul, Romain
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Evolutionary Dynamics and Lateral Gene Transfer in Raphidophyceae Plastid Genomes
err2022-05-26
err3
errOAAI
errKim, Jong Im; Jo, Bok Yeon; Park, Myung Gil; Yoo, Yeong Du; Shin, Woongghi; Archibald, John M.
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Why sequence all eukaryotes?
err2022-01-18
err49
errOAAI
errBlaxter, Mark; Archibald, John M.; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Di Palma, Federica; Durbin, Richard; Edwards, Scott V.; Graves, Jennifer A. M.; Hackett, Kevin J.; Hall, Neil; Jarvis, Erich D.; Johnson, Rebecca N.; Karlsson, Elinor K.; Kress, W. John; Kuraku, Shigehiro; Lawniczak, Mara K. N.; Lindblad-Toh, Kerstin; Lopez, Jose V.; Moran, Nancy A.; Robinson, Gene E.; Ryder, Oliver A.; Shapiro, Beth; Soltis, Pamela S.; Warnow, Tandy; Zhang, Guojie; Lewin, Harris A.
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The Earth BioGenome Project 2020: Starting the clock
err2022-01-18
err134
errOAAI
errLewin, Harris A.; Richards, Stephen; Aiden, Erez Lieberman; Allende, Miguel L.; Archibald, John M.; Balint, Miklos; Barker, Katharine B.; Baumgartner, Bridget; Belov, Katherine; Bertorelle, Giorgio; Blaxter, Mark L.; Cai, Jing; Caperello, Nicolette D.; Carlson, Keith; Castilla-Rubio, Juan Carlos; Chaw, Shu-Miaw; Chen, Lei; Childers, Anna K.; Coddington, Jonathan A.; Conde, Dalia A.; Corominas, Montserrat; Crandall, Keith A.; Crawford, Andrew J.; DiPalma, Federica; Durbin, Richard; Ebenezer, ThankGod E.; Edwards, Scott V.; Fedrigo, Olivier; Flicek, Paul; Formenti, Giulio; Gibbs, Richard A.; Gilbert, M. Thomas P.; Goldstein, Melissa M.; Graves, Jennifer Marshall; Greely, Henry T.; Grigoriev, Igor V.; Hackett, Kevin J.; Hall, Neil; Haussler, David; Helgen, Kristofer M.; Hogg, Carolyn J.; Isobe, Sachiko; Jakobsen, Kjetill Sigurd; Janke, Axel; Jarvis, Erich D.; Johnson, Warren E.; Jones, Steven J. M.; Karlsson, Elinor K.; Kersey, Paul J.; Kim, Jin-Hyoung; Kress, W. John; Kuraku, Shigehiro; Lawniczak, Mara K. N.; Leebens-Mack, James H.; Li, Xueyan; Lindblad-Toh, Kerstin; Liu, Xin; Lopez, Jose V.; Marques-Bonet, Tomas; Mazard, Sophie; Mazet, Jonna A. K.; Mazzoni, Camila J.; Myers, Eugene W.; O'Neill, Rachel J.; Paez, Sadye; Park, Hyun; Robinson, Gene E.; Roquet, Cristina; Ryder, Oliver A.; Sabir, Jamal S. M.; Shaffer, H. Bradley; Shank, Timothy M.; Sherkow, Jacob S.; Soltis, Pamela S.; Tang, Boping; Tedersoo, Leho; Uliano-Silva, Marcela; Wang, Kun; Wei, Xiaofeng; Wetzer, Regina; Wilson, Julia L.; Xu, Xun; Yang, Huanming; Yoder, Anne D.; Zhang, Guojie
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Standards recommendations for the Earth BioGenome Project
err2022-01-18
err40
errOAAI
errLawniczak, Mara K. N.; Durbin, Richard; Flicek, Paul; Lindblad-Toh, Kerstin; Wei, Xiaofeng; Archibald, John M.; Baker, William J.; Belov, Katherine; Blaxter, Mark L.; Bonet, Tomas Marques; Childers, Anna K.; Coddington, Jonathan A.; Crandall, Keith A.; Crawford, Andrew J.; Davey, Robert P.; Di Palma, Federica; Fang, Qi; Haerty, Wilfried; Hall, Neil; Hoff, Katharina J.; Howe, Kerstin; Jarvis, Erich D.; Johnson, Warren E.; Johnson, Rebecca N.; Kersey, Paul J.; Liu, Xin; Lopez, Jose Victor; Myers, Eugene W.; Pettersson, Olga Vinnere; Phillippy, Adam M.; Poelchau, Monica F.; Pruitt, Kim D.; Rhie, Arang; Castilla-Rubio, Juan Carlos; Sahu, Sunil Kumar; Salmon, Nicholas A.; Soltis, Pamela S.; Swarbreck, David; Thibaud-Nissen, Francoise; Wang, Sibo; Wegrzyn, Jill L.; Zhang, Guojie; Zhang, He; Lewin, Harris A.; Richards, Stephen
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