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Histo-molecular and survival study of high-grade astrocytoma with piloid features Belakhoua, Sarra; Vasudevaraja, Varshini; Wu, Jamin; Freitag, Eloise; Schroff, Chanel; Dhasmana, Neha; Serrano, Jonathan; Duckett, Drew; Horbinski, Craig; Snuderl, Matija Share Save
DNA methylation profiling of pituitary neuroendocrine tumors identifies distinct clinical and pathological subtypes based on epigenetic differentiation Belakhoua, Sarra; Vasudevaraja, Varshini; Schroff, Chanel; Galbraith, Kristyn; Movahed-Ezazi, Misha; Serrano, Jonathan; Yang, Yiying; Orringer, Daniel; Golfinos, John G.; Sen, Chandra; Pacione, Donato; Agrawal, Nidhi; Snuderl, Matija Share Save
Deep learning-based classifier for carcinoma of unknown primary using methylation quantitative trait loci Walker, Adam; Fang, Camila S.; Schroff, Chanel; Serrano, Jonathan; Vasudevaraja, Varshini; Yang, Yiying; Belakhoua, Sarra; Faustin, Arline; William, Christopher M.; Zagzag, David; Chiang, Sarah; Acosta, Andres Martin; Movahed-Ezazi, Misha; Park, Kyung; Moreira, Andre L.; Darvishian, Farbod; Galbraith, Kristyn; Snuderl, Matija Share Save
Racial distribution of molecularly classified brain tumors Fang, Camila S.; Wang, Wanyi; Schroff, Chanel; Movahed-Ezazi, Misha; Vasudevaraja, Varshini; Serrano, Jonathan; Sulman, Erik P.; Golfinos, John G.; Orringer, Daniel; Galbraith, Kristyn; Feng, Yang; Snuderl, Matija Share Save
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Inflammation in the tumor-adjacent lung as a predictor of clinical outcome in lung adenocarcinoma Dolgalev, Igor; Zhou, Hua; Murrell, Nina; Le, Hortense; Sakellaropoulos, Theodore; Coudray, Nicolas; Zhu, Kelsey; Vasudevaraja, Varshini; Yeaton, Anna; Goparaju, Chandra; Li, Yonghua; Sulaiman, Imran; Tsay, Jun-Chieh J.; Meyn, Peter; Mohamed, Hussein; Sydney, Iris; Shiomi, Tomoe; Ramaswami, Sitharam; Narula, Navneet; Kulicke, Ruth; Davis, Fred P.; Stransky, Nicolas; Smolen, Gromoslaw A.; Cheng, Wei-Yi; Cai, James; Punekar, Salman; Velcheti, Vamsidhar; Sterman, Daniel H.; Poirier, J. T.; Neel, Ben; Wong, Kwok-Kin; Chiriboga, Luis; Heguy, Adriana; Papagiannakopoulos, Thales; Nadorp, Bettina; Snuderl, Matija; Segal, Leopoldo N.; Moreira, Andre L.; Pass, Harvey I.; Tsirigos, Aristotelis Share Save
DNA Methylation Signature of Synchronous Endometrioid Endometrial and Ovarian Carcinomas Lin, Lawrence Hsu; Allison, Douglas H. R.; Turashvili, Gulisa; Vasudevaraja, Varshini; Tran, Ivy; Serrano, Jonathan; Weigelt, Britta; Ladanyi, Marc; Abu-Rustum, Nadeem R.; Snuderl, Matija; Chiang, Sarah Share Save
Clinical utility of whole-genome DNA methylation profiling as a primary molecular diagnostic assay for central nervous system tumors-A prospective study and guidelines for clinical testing Galbraith, Kristyn; Vasudevaraja, Varshini; Serrano, Jonathan; Shen, Guomiao; Tran, Ivy; Abdallat, Nancy; Wen, Mandisa; Patel, Seema; Movahed-Ezazi, Misha; Faustin, Arline; Spino-Keeton, Marissa; Roberts, Leah Geiser; Maloku, Ekrem; Drexler, Steven A.; Liechty, Benjamin L.; Pisapia, David; Krasnozhen-Ratush, Olga; Rosenblum, Marc; Shroff, Seema; Boue, Daniel R.; Davidson, Christian; Mao, Qinwen; Suchi, Mariko; North, Paula; Hopp, Amanda; Segura, Annette; Jarzembowski, Jason A.; Parsons, Lauren; Johnson, Mahlon D.; Mobley, Bret; Samore, Wesley; McGuone, Declan; Gopal, Pallavi P.; Canoll, Peter D.; Horbinski, Craig; Fullmer, Joseph M.; Farooqui, Midhat S.; Gokden, Murat; Wadhwani, Nitin R.; Richardson, Timothy E.; Umphlett, Melissa; Tsankova, Nadejda M.; DeWitt, John C.; Sen, Chandra; Placantonakis, Dimitris G.; Pacione, Donato; Wisoff, Jeffrey H.; Teresa Hidalgo, Eveline; Harter, David; William, Christopher M.; Cordova, Christine; Kurz, Sylvia C.; Barbaro, Marissa; Orringer, Daniel A.; Karajannis, Matthias A.; Sulman, Erik P.; Gardner, Sharon L.; Zagzag, David; Tsirigos, Aristotelis; Allen, Jeffrey C.; Golfinos, John G.; Snuderl, Matija Share Save
The prognostic impact of subclonal IDH1 mutation in grade 2-4 astrocytomas Vij, Meenakshi; Yokoda, Raquel T.; Rashidipour, Omid; Tran, Ivy; Vasudevaraja, Varshini; Snuderl, Matija; Yong, Raymund L.; Cobb, William S.; Umphlett, Melissa; Walker, Jamie M.; Tsankova, Nadejda M.; Richardson, Timothy E. Share Save
Genomic and Transcriptomic Analyses of NF1-Mutant Melanoma Identify Potential Targeted Approach for Treatment Jour, George; Illa-Bochaca, Irineu; Ibrahim, Milad; Donnelly, Douglas; Zhu, Kelsey; de Miera, Eleazar Vega-Saenz; Vasudevaraja, Varshini; Mezzano, Valeria; Ramswami, Sitharam; Yeh, Yu-Hsin; Winskill, Carolyn; Betensky, Rebecca A.; Mehnert, Janice; Osman, Iman Share Save
Clinicopathologic and molecular spectrum of testicular sex cord-stromal tumors not amenable to specific histopathologic subclassification Siegmund, Stephanie E.; Sholl, Lynette M.; Tsai, Harrison K.; Yang, Yiying; Vasudevaraja, Varshini; Tran, Ivy; Snuderl, Matija; Fletcher, Christopher D. M.; Cornejo, Kristine M.; Idrees, Muhammad T.; Al-Obaidy, Khaleel, I; Collins, Katrina; Gordetsky, Jennifer B.; Wobker, Sara E.; Hirsch, Michelle S.; Trpkov, Kiril; Yilmaz, Asli; Anderson, William J.; Quiroga-Garza, Gabriela; Magi-Galluzzi, Cristina; Canete-Portillo, Sofia; Acosta, Andres M. Share Save
Molecular correlates of male germ cell tumors with overgrowth of components resembling somatic malignancies Wyvekens, Nicolas; Sholl, Lynette M.; Yang, Yiying; Tran, Ivy; Vasudevaraja, Varshini; Dickson, Brendan C.; Al-Obaidy, Khaleel, I; Baniak, Nicholas; Collins, Katrina; Gordetsky, Jennifer B.; Idrees, Muhammad T.; Kao, Chia-Sui; Maclean, Fiona; Matoso, Andres; Ulbright, Thomas M.; Wobker, Sara E.; Fletcher, Christopher D. M.; Hirsch, Michelle S.; Hornick, Jason L.; Snuderl, Matija; Acosta, Andres M. Share Save
Association of hyperglycemia and molecular subclass on survival in IDH-wildtype glioblastoma Liu, Elisa K.; Vasudevaraja, Varshini; Sviderskiy, Vladislav O.; Feng, Yang; Tran, Ivy; Serrano, Jonathan; Cordova, Christine; Kurz, Sylvia C.; Golfinos, John G.; Sulman, Erik P.; Orringer, Daniel A.; Placantonakis, Dimitris; Possemato, Richard; Snuderl, Matija Share Save
Clinical, Pathological, and Molecular Characteristics of Diffuse Spinal Cord Gliomas Garcia, Mekka R.; Feng, Yang; Vasudevaraja, Varshini; Galbraith, Kristyn; Serrano, Jonathan; Thomas, Cheddhi; Radmanesh, Alireza; Hidalgo, Eveline T.; Harter, David H.; Allen, Jeffrey C.; Gardner, Sharon L.; Osorio, Diana S.; William, Christopher M.; Zagzag, David; Boue, Daniel R.; Snuderl, Matija Share Save
DNA Methylation Profiling Identifies Subgroups of Lung Adenocarcinoma with Distinct Immune Cell Composition, DNA Methylation Age, and Clinical Outcome Guidry, Kayla; Vasudevaraja, Varshini; Labbe, Kristen; Mohamed, Hussein; Serrano, Jonathan; Guidry, Brett W.; DeLorenzo, Michael; Zhang, Hua; Deng, Jiehui; Sahu, Soumyadip; Almonte, Christina; Moreira, Andre L.; Tsirigos, Aristotelis; Papagiannakopoulos, Thales; Pass, Harvey; Snuderl, Matija; Wong, Kwok-Kin Share Save
TSC2-mutant uterine sarcomas with JAZF1-SUZ12 fusions demonstrate hybrid features of endometrial stromal sarcoma and PEComa and are responsive to mTOR inhibition Chiang, Sarah; Vasudevaraja, Varshini; Serrano, Jonathan; Stewart, Colin J. R.; Oliva, Esther; Momeni-Boroujeni, Amir; Jungbluth, Achim A.; Paula, Arnaud Da Cruz; da Silva, Edaise M.; Weigelt, Britta; Park, Kay J.; Soslow, Robert A.; Murali, Rajmohan; Ellenson, Lora H.; Benayed, Ryma; Ladanyi, Marc; Abu-Rustum, Nadeem R.; Dickson, Mark A.; Cohen, Seth; Aghajanian, Carol; Hensley, Martee L.; Lee, Cheng-Han; Snuderl, Matija; Konner, Jason A. Share Save
Spatial progression and molecular heterogeneity of IDH-mutant glioblastoma determined by DNA methylation-based mapping Lyon, James F.; Vasudevaraja, Varshini; Mirchia, Kanish; Walker, Jamie M.; Corona, Robert J.; Chin, Lawrence S.; Tran, Ivy; Snuderl, Matija; Richardson, Timothy E.; Viapiano, Mariano S. Share Save
Somatic Focal Copy Number Gains of Noncoding Regions of Receptor Tyrosine Kinase Genes in Treatment-Resistant Epilepsy Vasudevaraja, Varshini; Rodriguez, Javier Hernaez; Pelorosso, Cristiana; Zhu, Kaicen; Buccoliero, Anna Maria; Onozato, Maristela; Mohamed, Hussein; Serrano, Jonathan; Tredwin, Lily; Garonzi, Marianna; Forcato, Claudio; Zeck, Briana; Ramaswami, Sitharam; Stafford, James; Faustin, Arline; Friedman, Daniel; Hidalgo, Eveline Teresa; Zagzag, David; Skok, Jane; Heguy, Adriana; Chiriboga, Luis; Conti, Valerio; Guerrini, Renzo; Iafrate, A. John; Devinsky, Orrin; Tsirigos, Aristotelis; Golfinos, John G.; Snuderl, Matija Share Save
Dissecting the immunosuppressive tumor microenvironments in Glioblastoma-on-a-Chip for optimized PD-1 immunotherapy Cui, Xin; Ma, Chao; Vasudevaraja, Varshini; Serrano, Jonathan; Tong, Jie; Peng, Yansong; Delorenzo, Michael; Shen, Guomiao; Frenster, Joshua; Morales, Renee-Tyler Tan; Qian, Weiyi; Tsirigos, Aristotelis; Chi, Andrew S.; Jain, Rajan; Kurz, Sylvia C.; Sulman, Erik P.; Placantonakis, Dimitris G.; Snuderl, Matija; Chen, Weiqiang Share Save
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