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Sohrab P. Shah

Memorial Sloan Kettering Cancer Center

90H-index
611Paper Count
4.4WCitation Count
Published Papers 134
Publication Date
Enabling whole genome sequencing analysis from FFPE specimens in clinical oncology
err2025-11-27
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errOAAI
errDylan Domenico; Gunes Gundem; Max F. Levine; Juan Esteban Arango-Ossa; Pauline Robbe; Georgios Asimomitis; Cassidy Cobbs; Emily Stockfisch; Tara O’Donohue; Charlotte Brierley; Janine Senz; Dawn Cochrane; Neeman Mohibullah; Umesh Bhanot; Joachim Silber; Neerav Shukla; Sohrab P. Shah; Britta Weigelt; Oliver Zivanovic; Andrew McPherson; Anna Schuh; Andrew L. Kung; Elli Papaemmanuil
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Choroid Plexus Inflammation Initiates Leptomeningeal Metastasis
err2025-11-01
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errOAAI
errNobre, Ana Rita; Wang, Helen; Doerries, Lea; Remsik, Jan; Estrera, Rachel; Osei-Gyening, Isaiah; Chaligne, Ronan; Ceglia, Nicholas; Shah, Sohrab; Boire, Adrienne
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Tracking clonal evolution during treatment in ovarian cancer using cell-free DNA
errNature
IF48.5
err2025-10-01
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errOAAI
errMarc J. Williams; Ignacio Vázquez-García; Grittney Tam; Michelle Wu; Nancy Varice; Eliyahu Havasov; Hongyu Shi; Duaa H. Al-Rawi; Gryte Satas; Hannah J. Lees; Jake June-Koo Lee; Matthew A. Myers; Matthew Zatzman; Nicole Rusk; Emily Ali; Ronak H. Shah; Michael F. Berger; Neeman Mohibullah; Yulia Lakhman; Dennis S. Chi; Nadeem R. Abu-Rustum; Carol Aghajanian; Andrew McPherson; Dmitriy Zamarin; Brian Loomis; Britta Weigelt; Claire F. Friedman; Sohrab P. Shah
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Ongoing genome doubling shapes evolvability and immunity in ovarian cancer
errNature
IF48.5
err2025-07-16
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errOAAI
errAndrew McPherson; Ignacio Vázquez-García; Matthew A. Myers; Duaa H. Al-Rawi; Matthew Zatzman; Adam C. Weiner; Samuel Freeman; Neeman Mohibullah; Gryte Satas; Marc J. Williams; Nicholas Ceglia; Danguolė Norkūnaitė; Allen W. Zhang; Jun Li; Jamie L. P. Lim; Michelle Wu; Seongmin Choi; Eliyahu Havasov; Diljot Grewal; Hongyu Shi; Minsoo Kim; Roland F. Schwarz; Tom Kaufmann; Khanh Ngoc Dinh; Florian Uhlitz; Julie Tran; Yushi Wu; Ruchi Patel; Satish Ramakrishnan; DooA Kim; Justin Clarke; Hunter Green; Emily Ali; Melody DiBona; Nancy Varice; Ritika Kundra; Vance Broach; Ginger J. Gardner; Kara Long Roche; Yukio Sonoda; Oliver Zivanovic; Sarah H. Kim; Rachel N. Grisham; Ying L. Liu; Agnes Viale; Nicole Rusk; Yulia Lakhman; Lora H. Ellenson; Simon Tavaré; Samuel Aparicio; Dennis S. Chi; Carol Aghajanian; Nadeem R. Abu-Rustum; Claire F. Friedman; Dmitriy Zamarin; Britta Weigelt; Samuel F. Bakhoum; Sohrab P. Shah
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The dynamic immune behavior of primary and metastatic ovarian carcinoma
err2025-04-25
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errOAAI
errStur, Elaine; Peng, Fuduan; Teng, Pang-ning; Bayraktar, Emine; Hu, Min; Corvigno, Sara; Brown, David J.; Lee, Sanghoon; Moore, Kathleen N.; Bateman, Nicholas W.; Darcy, Kathleen M.; Maxwell, George L.; P. Conrads, Thomas; Sahni, Nidhi; Vazquez-Garcia, Ignacio; Shah, Sohrab P.; Celestino, Joseph; D. Fleming, Nicole; Navin, Nicholas E.; Wang, Linghua
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Luminal breast epithelial cells of BRCA1 or BRCA2 mutation carriers and noncarriers harbor common breast cancer copy number alterations
err2024-11-20
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errOAAI
errWilliams, Marc J.; Oliphant, Michael U. J.; Au, Vinci; Liu, Cathy; Baril, Caroline; O'Flanagan, Ciara; Lai, Daniel; Beatty, Sean; Van Vliet, Michael; Yiu, Jacky C. H.; O'Connor, Lauren; Goh, Walter L.; Pollaci, Alicia; Weiner, Adam C.; Grewal, Diljot; Mcpherson, Andrew; Norton, Klarisa; Moore, Mckenna; Prabhakar, Vikas; Agarwal, Shailesh; Garber, Judy E.; Dillon, Deborah A.; Shah, Sohrab P.; Brugge, Joan S.; Aparicio, Samuel
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Inferring replication timing and proliferation dynamics from single-cell DNA sequencing data
err2024-10-01
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errOAAI
errWeiner, Adam C.; Williams, Marc J.; Shi, Hongyu; Vazquez-Garcia, Ignacio; Salehi, Sohrab; Rusk, Nicole; Aparicio, Samuel; Shah, Sohrab P.; McPherson, Andrew
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Disappearing Signet Ring Cell Adenocarcinoma in Gastric Cancer Patients
err2024-09-29
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PREAI
errSreeram, Aravind; Stroobant, Emily E.; Laszkowska, Monika; Guilford, Parry; Shimada, Shoji; Nishimura, Makoto; Shah, Sohrab; Vardhana, Santosha; Tang, Laura H.; Strong, Vivian E.
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ASO Visual Abstract: Disappearing Signet Ring Cell Adenocarcinoma in Gastric Cancer Patients
err2024-09-25
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PREAI
errSreeram, Aravind; Stroobant, Emily E.; Laszkowska, Monika; Guilford, Parry; Shimada, Shoji; Nishimura, Makoto; Shah, Sohrab; Vardhana, Santosha; Tang, Laura H.; Strong, Vivian E.
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DNA liquid biopsy-based prediction of cancer-associated venous thromboembolism
err2024-08-15
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errOAAI
errJee, Justin; Brannon, A. Rose; Singh, Rohan; Derkach, Andriy; Fong, Christopher; Lee, Adrian; Gray, Lauren; Pichotta, Karl; Luthra, Anisha; Diosdado, Monica; Haque, Mohammad; Guo, Jiannan; Hernandez, Jennifer; Garg, Kavita; Wilhelm, Clare; Arcila, Maria E.; Pavlakis, Nick; Clarke, Stephen; Shah, Sohrab P.; Razavi, Pedram; Reis-Filho, Jorge S.; Ladanyi, Marc; Schultz, Nikolaus; Zwicker, Jeffrey; Berger, Michael F.; Li, Bob T.; Mantha, Simon
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Single-cell decoding of drug induced transcriptomic reprogramming in triple negative breast cancers
err2024-07-18
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errOAAI
errKabeer, Farhia; Tran, Hoa; Andronescu, Mirela; Singh, Gurdeep; Lee, Hakwoo; Salehi, Sohrab; Wang, Beixi; Biele, Justina; Brimhall, Jazmine; Gee, David; Cerda, Viviana; O'Flanagan, Ciara; Algara, Teresa; Kono, Takako; Beatty, Sean; Zaikova, Elena; Lai, Daniel; Lee, Eric; Moore, Richard; Mungall, Andrew J.; Williams, Marc J.; Roth, Andrew; Campbell, Kieran R.; Shah, Sohrab P.; Aparicio, Samuel
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Single-cell mtDNA dynamics in tumors is driven by coregulation of nuclear and mitochondrial genomes
err2024-05-13
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errOAAI
errKim, Minsoo; Gorelick, Alexander N.; Vazquez-Garcia, Ignacio; Williams, Marc J.; Salehi, Sohrab; Shi, Hongyu; Weiner, Adam C.; Ceglia, Nick; Funnell, Tyler; Park, Tricia; Boscenco, Sonia; O'Flanagan, Ciara H.; Jiang, Hui; Grewal, Diljot; Tang, Cerise; Rusk, Nicole; Gammage, Payam A.; McPherson, Andrew; Aparicio, Sam; Shah, Sohrab P.; Reznik, Ed
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Interrogating the role of the cGAS/STING pathway fallopian tube transformation
err2024-03-22
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PREAI
errAl-Rawi, Duaa Hassan; Norkunaite, Danguole; Bakhoum, Samuel; Shah, Sohrab
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Single-cell DNA replication dynamics in genomically unstable cancers
err2024-03-22
err0
PREAI
errWeiner, Adam C.; Williams, Marc; Shi, Hongyu; Vazquez-Garcia, Ignacio; Salehi, Sohrab; Rusk, Nicole; Shah, Sohrab P.; McPherson, Andrew
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Multimodal modeling of digitized histopathology slides improves risk stratification in hormone receptor-positive breast cancer patients
err2024-03-22
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PREAI
errBoehm, Kevin M.; Marra, Antonio; Reis-Filho, Jorge S.; Chandarlapaty, Sarat; Pareja, Fresia; Shah, Sohrab P.
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Glioblastoma mutational profiles drive cancer cell signaling and immune evasion
err2024-03-22
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PREAI
errPourmaleki, Maryam; Greenstein, Brian D.; Jones, Caitlin J.; Nandakumar, Subhiksha; Navarrete, Daniel A.; Mehta, Smrutiben; Campos, Carl; Hollmann, Travis J.; Socci, Nicholas D.; Bale, Tejus; Shah, Sohrab P.; Mellinghoff, Ingo K.
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Chromosomal instability causes epigenetic aberrations in cancer
err2024-03-22
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PREAI
errAgustinus, Albert S.; Al-Rawi, Duaa; Dameracharla, Bhargavi; Raviram, Ramya; Jones, Bailey S.; Stransky, Stephanie; Scipioni, Lorenzo; Luebeck, Jens; Di Bona, Melody; Norkunaite, Danguole; Myers, Robert M.; Duran, Mercedes; Choi, Seongmin; Weigelt, Britta; Yomtoubian, Shira; McPherson, Andrew; Toufektchan, Eleonore; Keuper, Kristina; Mischel, Paul S.; Mittal, Vivek; Shah, Sohrab P.; Maciejowski, John; Storchova, Zuzana; Gratton, Enrico; Ly, Peter; Landau, Dan; Bakhoum, Mathieu F.; Koche, Richard P.; Sidoli, Simone; Bafna, Vineet; David, Yael; Bakhoum, Samuel F.
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Scratch: A highly modular pipeline for single-cell cancer research
err2024-03-22
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PREAI
errFonseca, Andre F.; Han, Guangchun; Ribeiro-Dantas, Marcel; Dai, Enyu; Grewal, Diljot; Zatzman, Matthew; Havasov, Eliyahu; McPherson, Andrew; Noble, Michael N.; Beroukhim, Rameen; Karchin, Rachel; Shah, Sohrab P.; Wang, Linghua
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Genomically encoded lineage plasticity drives resistance to EGFR targeted therapy in lung adenocarcinoma
err2024-03-22
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PREAI
errZatzman, Matthew; Quintanal-Villalonga, Alvaro; Salehi, Sohrab; Falcon, Christina; Ceglia, Nicholas; Shah, Sohrab P.; Rudin, Charles M.; Yu, Helena A.
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Allele-specific transcriptional effects of subclonal copy number alterations enable genotype-phenotype mapping in cancer cells
err2024-03-20
err4
errOAAI
errShi, Hongyu; Williams, Marc J.; Satas, Gryte; Weiner, Adam C.; Mcpherson, Andrew; Shah, Sohrab P.
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