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Andrew L. Ferguson

university of chicago

43H-index
264Paper Count
9.3KCitation Count
Published Papers 103
Publication Date
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Cytoplasmic abundant heat-soluble proteins from tardigrades protect synthetic cells under stress
errNature Communications
IF15.7
err2026-05-02
err0
errOAAI
errYongkang Xi; Jianming Mao; Samuel J. Chen; Hossein Moghimianavval; Young Jin Lee; Ayush Panda; Alexander J. Huang; Daniel H. Zhou; L. Andy Xu; Kayla Y. Fu; Solomon Adera; Andrew L. Ferguson; Allen P. Liu
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errSave
Characterizing Defect Dynamics in Silicon Carbide Using Symmetry-Adapted Collective Variables and Machine Learning Interatomic Potentials
errJournal of Chemical Theory and Computation
IF5.5
err2026-04-23
err0
PREAI
errSoumajit Dutta; Cunzhi Zhang; Gustavo Perez Lemus; Juan J. de Pablo; Francois Gygi; Giulia Galli; Andrew L. Ferguson
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errSave
Introduction to a Festschrift in honour of Juan de Pablo's 60th birthday
errmol. syst. des. eng.
IF0
err2026-04-21
err0
PREAI
errClaire S. Adjiman; Andrew L. Ferguson
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errSave
The future of artificial intelligence and the mathematical and physical sciences (AI+MPS)*
errmachine learning: science and technology
IF0
err2026-03-24
err0
errOAAI
errAndrew Ferguson; Marisa LaFleur; Lars Ruthotto; Jesse Thaler; Yuan-Sen Ting; Pratyush Tiwary; Soledad Villar
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errSave
Data-Driven Engineering of Thermostable Collagen-Mimetic Peptoid Triple Helices
errMacromolecular Rapid Communications
IF4.3
err2026-02-24
err0
errOAAI
errAlex Berlaga; Renyu Zheng; Zeqian Zhang; Junhee Lee; Diya Gandhi; Chun-Long Chen; Andrew L. Ferguson
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errSave
Assembly of small silica nanoparticles using lipid-tethered DNA ‘bonds’
errSoft Matter
IF2.8
err2025-11-28
err0
errOAAI
errHuat Thart Chiang; Naomi Kern; Zachery R. Wylie; Abdul Moeez; Haoqing Zhang; Daniel McKeen; Nicholas S. M. Herringer; Oleg Gang; Andrew L. Ferguson; Zachary Sherman; Lilo D. Pozzo
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errSave
Computational Design of Polypeptide-Based Compartments for Synthetic Cells
errDigital Discovery
IF5.6
err2025-11-18
err0
errOAAI
errJianming Mao; Yongkang Xi; Armin Shayesteh Zadeh; Allen Liu; Andrew L Ferguson
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errSave
Tribute to Athanassios Z. Panagiotopoulos
errThe Journal of Physical Chemistry B
IF2.9
err2025-10-30
err0
errOAAI
errPablo G. Debenedetti; Jeffrey R. Errington; Andrew L. Ferguson; M. Scott Shell; Antonia Statt
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errSave
Computing Reaction Kinetics with MC-PDFT–OPESf: Combining Multireference Electronic Structure Theory and Enhanced Sampling
errThe Journal of Physical Chemistry Letters
IF0
err2025-10-27
err0
PREAI
errAniruddha Seal; Laura Gagliardi; Andrew L. Ferguson
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Non-Equilibrium Dynamics and Non-Gaussian Fluctuations of an Optical Matter System Manifesting Pseudorotation
errACS Nano
IF16
err2025-10-08
err0
PREAI
errShiqi Chen; John A. Parker; John Linderman; Curtis W. Peterson; Emmanuel Valenton; Stuart A. Rice; Andrew L. Ferguson; Norbert F. Scherer
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errSave
Publisher Correction: Assembly of short amphiphilic peptoids into nanohelices with controllable supramolecular chirality
errNature Communications
IF15.7
err2025-09-03
err0
errOAAI
errRenyu Zheng; Mingfei Zhao; Jingshan S. Du; Tarunya Rao Sudarshan; Yicheng Zhou; Anant K. Paravastu; James J. De Yoreo; Andrew L. Ferguson; Chun-Long Chen
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errSave
Reversible parts-per-trillion-level detection of perfluorooctane sulfonic acid in tap water using field-effect transistor sensors
errNATURE WATER
IF0
err2025-09-01
err0
PREAI
errWang, Yuqin; Jang, Hyun-June; Topel, Max; Dasetty, Siva; Liu, Yining; Ateia, Mohamed; Tam, Aaron; Rozyyev, Vepa; Ouyang, Ellie; Zhuang, Wen; Pu, Haihui; Lee, Sang Soo; Sui, Xiaoyu; Elam, Jeffrey W.; Ferguson, Andrew L.; Darling, Seth B.; Chen, Junhong
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errSave
High-Throughput Virtual Screening of Protein-Catalyzed Capture Agents for Novel Hydrogel-Nanoparticle Fentanyl Sensors
errJOURNAL OF PHYSICAL CHEMISTRY B
IF2.9
err2025-09-01
err1
PREAI
errZadeh, Armin Shayesteh; Winton, Alexander J.; Palomba, Joseph M.; Ferguson, Andrew L.
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errSave
Prediction of αIIbβ3 integrin structures along its minimum free energy activation pathway
errBiophysical Journal
IF3.1
err2025-08-18
err0
PREAI
errSiva Dasetty; Robert E. Coffman; Tamara C. Bidone; Andrew L. Ferguson
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errSave
Recent advances in machine learning and coarse-grained potentials for biomolecular simulations
errBiophysical Journal
IF3.1
err2025-06-20
err0
errOAAI
errAdolfo B. Poma; Alejandra Hinostroza Caldas; Luis F. Cofas-Vargas; Michael S. Jones; Andrew L. Ferguson; Leonardo Medrano Sandonas
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errSave
Structure and Synthesizability of Iron-Sulfur Metal-Organic Frameworks
errJOURNAL OF THE AMERICAN CHEMICAL SOCIETY
IF15.6
err2025-05-16
err0
PREAI
errMao, Jianming; Jiang, Ningxin; Daru, Andrea; Filatov, Alexander S.; Burch, Jessica E.; Hofmann, Jan; Vornholt, Simon M.; Chapman, Karena W.; Anderson, John S.; Ferguson, Andrew L.
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errSave
PLUMED Tutorials: A collaborative, community-driven learning ecosystem
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2025-03-07
err1
PREAI
errTribello, Gareth A.; Bonomi, Massimiliano; Bussi, Giovanni; Camilloni, Carlo; Armstrong, Blake I.; Arsiccio, Andrea; Aureli, Simone; Ballabio, Federico; Bernetti, Mattia; Bonati, Luigi; Brookes, Samuel G. H.; Brotzakis, Z. Faidon; Capelli, Riccardo; Ceriotti, Michele; Chan, Kam-Tung; Cossio, Pilar; Dasetty, Siva; Donadio, Davide; Ensing, Bernd; Ferguson, Andrew L.; Fraux, Guillaume; Gale, Julian D.; Gervasio, Francesco Luigi; Giorgino, Toni; Herringer, Nicholas S. M.; Hocky, Glen M.; Hoff, Samuel E.; Invernizzi, Michele; Languin-Cattoen, Olivier; Leone, Vanessa; Limongelli, Vittorio; Lopez-Acevedo, Olga; Marinelli, Fabrizio; Febrer Martinez, Pedro; Masetti, Matteo; Mehdi, Shams; Michaelides, Angelos; Murtada, Mhd Hussein; Parrinello, Michele; Piaggi, Pablo M.; Pietropaolo, Adriana; Pietrucci, Fabio; Pipolo, Silvio; Pritchard, Claire; Raiteri, Paolo; Raniolo, Stefano; Rapetti, Daniele; Rizzi, Valerio; Rydzewski, Jakub; Salvalaglio, Matteo; Schran, Christoph; Seal, Aniruddha; Shayesteh Zadeh, Armin; Silva, Tomas F. D.; Spiwok, Vojtech; Stirnemann, Guillaume; Sucerquia, Daniel; Tiwary, Pratyush; Valsson, Omar; Vendruscolo, Michele; Voth, Gregory A.; White, Andrew D.; Wu, Jiangbo
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Data-driven equation-free dynamics applied to many-protein complexes: The microtubule tip relaxation
errBiophysical Journal
IF3.1
err2025-01-16
err0
PREAI
errJiangbo Wu; Siva Dasetty; Daniel Beckett; Yihang Wang; Weizhi Xue; Tomasz Skóra; Tamara C. Bidone; Andrew L. Ferguson; Gregory A. Voth
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errSave
FlowBack: A Generalized Flow-Matching Approach for Biomolecular Backmapping
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2025-01-07
err0
PREAI
errJones, Michael S.; Khanna, Smayan; Ferguson, Andrew L.
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errSave
A modular and extensible CHARMM-compatible model for all-atom simulation of polypeptoids
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2024-12-23
err0
errOAAI
errBerlaga, Alex; Torkelson, Kaylyn; Seal, Aniruddha; Pfaendtner, Jim; Ferguson, Andrew L.
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Research Directions

No research directions
Co-authors
Cooperation Journals
R
Robert E. W. Hancock
H-index: 166 · Papers: 966
B
Bruce D. Walker
H-index: 160 · Papers: 945
M
Michele Parrinello
H-index: 155 · Papers: 924
V
Vinayak P. Dravid
H-index: 121 · Papers: 1.1K
M
Michele Vendruscolo
H-index: 118 · Papers: 1.1K
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