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J

Jean‐Luc Jannink

r.w. holley center for agriculture and health

72H-index
370Paper Count
2.4WCitation Count
Published Papers 82
Publication Date
Characterization of oat chromosome rearrangements in advanced breeding lines and implications for genetic improvement
err2026-08-06
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errOAAI
errGuilherme Oliveira; Wubishet Bekele; Françoise Dalprá Dariva; Sumandeep Bazzer; Jason Fiedler; Raja Sekhar Nandety; Jean-Luc Jannink; Melanie Caffe
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DeltaBreed: A BrAPI-centric breeding data information system
err2025-12-12
err1
PREAI
errYarnes, Shawn C.; Palladino, Nick; Meidlinger, Dave J.; Philips, David R.; Sweeney, Heather M.; Mustafa, Shahana A.; Mandych, Matthew L.; Bouabane, Sam; Parsons, Tim E.; Slonecki, Tyler J.; Zhao, Dongyan; Rife, Trevor W.; Ellerbrock, Bryan J.; Courtney, Chaney; Selby, Peter; Mueller, Lukas A.; Flores-Gonzalez, Mirella; Aparicio, Johan S.; Al-Sham'aa, Khaled; Raubach, Sebastian; Jannink, Jean-Luc; Buckler, Edward S.; Beil, Craig T.; Sheehan, Moira J.
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Author Correction: A pangenome and pantranscriptome of hexaploid oat
errNature
IF48.5
err2025-11-20
err0
errOAAI
errRaz Avni; Nadia Kamal; Lidija Bitz; Eric N. Jellen; Wubishet A. Bekele; Tefera T. Angessa; Petri Auvinen; Oliver Bitz; Brian Boyle; Francisco J. Canales; Craig H. Carlson; Brett Chapman; Harmeet Singh Chawla; Yutang Chen; Dario Copetti; Samara Correia de Lemos; Viet Dang; Steven R. Eichten; Kathy Esvelt Klos; Amit M. Fenn; Anne Fiebig; Yong-Bi Fu; Heidrun Gundlach; Rajeev Gupta; Georg Haberer; Tianhua He; Matthias H. Herrmann; Axel Himmelbach; Catherine J. Howarth; Haifei Hu; Julio Isidro y Sánchez; Asuka Itaya; Jean-Luc Jannink; Yong Jia; Rajvinder Kaur; Manuela Knauft; Tim Langdon; Thomas Lux; Sofia Marmon; Vanda Marosi; Klaus F. X. Mayer; Steve Michel; Raja Sekhar Nandety; Kirby T. Nilsen; Edyta Paczos-Grzęda; Asher Pasha; Elena Prats; Nicholas J. Provart; Adriana Ravagnani; Robert W. Reid; Jessica A. Schlueter; Alan H. Schulman; Taner Z. Sen; Jaswinder Singh; Mehtab Singh; Nick Sirijovski; Nils Stein; Bruno Studer; Sirja Viitala; Shauna Vronces; Sean Walkowiak; Penghao Wang; Amanda J. Waters; Charlene P. Wight; Weikai Yan; Eric Yao; Xiao-Qi Zhang; Gaofeng Zhou; Zhou Zhou; Nicholas A. Tinker; Jason D. Fiedler; Chengdao Li; Peter J. Maughan; Manuel Spannagl; Martin Mascher
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Designing superior crosses in cassava using genomic mating to boost yield and genetic diversity
err2025-11-01
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errOAAI
errGuimaraes, Paulo Henrique Ramos; Bandeira e Sousa, Massaine; Jannink, Jean-Luc; Campos, Marcos de Souza; de Oliveira, Eder Jorge
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Global genomic population structure of wild and cultivated oat reveals signatures of chromosome rearrangements
err2025-10-29
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errOAAI
errWubishet A. Bekele; Raz Avni; Clayton L. Birkett; Asuka Itaya; Charlene P. Wight; Justin Bellavance; Sophie Brodführer; Francisco J. Canales; Craig H. Carlson; Anne Fiebig; Yongle Li; Steve Michel; Raja Sekhar Nandety; David J. Waring; Juan D. Arbelaez; Aaron D. Beattie; Melanie Caffe; Isabel A. del Blanco; Jason D. Fiedler; Rajeev Gupta; Lucia Gutierrez; John C. Harris; Stephen A. Harrison; Matthias H. Herrmann; Yung-Fen Huang; Julio Isidro y Sanchez; Michael S. McMullen; Jennifer W. Mitchell Fetch; Kirby T. Nilsen; Isobel A. P. Parkin; YuanYing Peng; Kevin P. Smith; Tim Sutton; Weikai Yan; Pamela Zwer; Axel Diederichsen; Kathy Esvelt Klos; Yong-Bi Fu; Catherine J. Howarth; Jean-Luc Jannink; Eric N. Jellen; Tim Langdon; Peter J. Maughan; Edyta Paczos-Grzeda; Elena Prats; Taner Z. Sen; Martin Mascher; Nicholas A. Tinker
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A pangenome and pantranscriptome of hexaploid oat
errNature
IF48.5
err2025-10-29
err0
errOAAI
errRaz Avni; Nadia Kamal; Lidija Bitz; Eric N. Jellen; Wubishet A. Bekele; Tefera T. Angessa; Petri Auvinen; Oliver Bitz; Brian Boyle; Francisco J. Canales; Craig H. Carlson; Brett Chapman; Harmeet Singh Chawla; Yutang Chen; Dario Copetti; Samara Correia de Lemos; Viet Dang; Steven R. Eichten; Kathy Esvelt Klos; Amit M. Fenn; Anne Fiebig; Yong-Bi Fu; Heidrun Gundlach; Rajeev Gupta; Georg Haberer; Tianhua He; Matthias H. Herrmann; Axel Himmelbach; Catherine J. Howarth; Haifei Hu; Julio Isidro y Sánchez; Asuka Itaya; Jean-Luc Jannink; Yong Jia; Rajvinder Kaur; Manuela Knauft; Tim Langdon; Thomas Lux; Sofia Marmon; Vanda Marosi; Klaus F. X. Mayer; Steve Michel; Raja Sekhar Nandety; Kirby T. Nilsen; Edyta Paczos-Grzęda; Asher Pasha; Elena Prats; Nicholas J. Provart; Adriana Ravagnani; Robert W. Reid; Jessica A. Schlueter; Alan H. Schulman; Taner Z. Sen; Jaswinder Singh; Mehtab Singh; Nick Sirijovski; Nils Stein; Bruno Studer; Sirja Viitala; Shauna Vronces; Sean Walkowiak; Penghao Wang; Amanda J. Waters; Charlene P. Wight; Weikai Yan; Eric Yao; Xiao-Qi Zhang; Gaofeng Zhou; Zhou Zhou; Nicholas A. Tinker; Jason D. Fiedler; Chengdao Li; Peter J. Maughan; Manuel Spannagl; Martin Mascher
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A Unified Crop Ontology for Standardizing Phenotypic Data Collection in Bottle Gourd [Lagenaria siceraria (Molina) Standl.]
err2025-10-01
err0
PREAI
errLukach, Marlie E.; Yetisir, Halit; Kanchana-Udomkan, Chutchamas; Stansell, Zachary; Sheehan, Moira J.; Jannink, Jean-Luc
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Response to plant defense elicitation is genotype and context dependent in diverse oat (Avena sativa L.) germplasm
err2025-09-01
err0
PREAI
errBrzozowski, Lauren J.; Smith, Kevin P.; Ohm, Jae-Bom; Clark, Anthony J.; Palakurthi, Ramesh; Sorrells, Mark E.; Gore, Michael A.; Jannink, Jean-Luc
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Mediated pleiotropy drives the negative correlation of total carotenoid and dry matter contents in cassava (Manihot esculenta)
err2025-08-01
err1
PREAI
errVillwock, Seren S.; Parkes, Elizabeth Y.; Mbanjo, Edwige Gaby Nkouaya; Rabbi, Ismail Y.; Jannink, Jean-Luc
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Scaffolded and annotated nuclear and organelle genomes of the North American brown alga Saccharina latissima
err2025-05-14
err0
errOAAI
errDeWeese, Kelly; Molano, Gary; Calhoun, Sara; Lipzen, Anna; Jenkins, Jerry; Williams, Melissa; Plott, Christopher; Talag, Jayson; Grimwood, Jane; Jannink, Jean-Luc; Grigoriev, Igor V.; Schmutz, Jeremy; Yarish, Charles; Nuzhdin, Sergey; Lindell, Scott
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Evaluation of six sugar kelp crosses selected for high yield at three Northeastern US farms
err2025-04-01
err0
PREAI
errGonzalez, Sara T.; Li, Yaoguang; Aydlett, Margaret; Bailey, David; Kerr, Hadley; Doall, Michael; Gobler, Christopher J.; Chambers, Michael; Jannink, Jean-Luc; Yarish, Charles; Lindell, Scott
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Genomic strategies to facilitate breeding for increased β-Glucan content in oat (Avena sativa L.)
err2025-01-14
err0
errOAAI
errBazzer, Sumandeep Kaur; Oliveira, Guilherme; Fiedler, Jason D.; Nandety, Raja Sekhar; Jannink, Jean-Luc; Caffe, Melanie
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Genetic analysis of cassava brown streak disease root necrosis using image analysis and genome-wide association studies
err2024-03-18
err0
errOAAI
errNandudu, Leah; Strock, Christopher; Ogbonna, Alex; Kawuki, Robert; Jannink, Jean-Luc
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Genetic complexity of cassava brown streak disease: insights from qPCR-based viral titer analysis and genome-wide association studies
err2024-03-13
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errOAAI
errNandudu, Leah; Sheat, Samar; Winter, Stephan; Ogbonna, Alex; Kawuki, Robert; Jannink, Jean-Luc
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Genomic prediction of seed nutritional traits in biparental families of oat (Avena sativa)
err2023-08-04
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errOAAI
errBrzozowski, Lauren J. J.; Campbell, Malachy T. T.; Hu, Haixiao; Yao, Linxing; Caffe, Melanie; Gutierrez, Lucia; Smith, Kevin P. P.; Sorrells, Mark E. E.; Gore, Michael A. A.; Jannink, Jean-Luc
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Genetic dissection of cassava brown streak disease in a genomic selection population
err2023-01-13
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errOAAI
errNandudu, Leah; Kawuki, Robert; Ogbonna, Alex; Kanaabi, Michael; Jannink, Jean-Luc
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Increasing cassava root yield: Additive-dominant genetic models for selection of parents and clones
err2022-12-16
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errOAAI
errde Andrade, Luciano Rogerio Braatz; Sousa, Massaine Bandeira e; Wolfe, Marnin; Jannink, Jean-Luc; de Resende, Marcos Deon Vilela; Azevedo, Camila Ferreira; de Oliveira, Eder Jorge
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Parsimonious genotype by environment interaction covariance models for cassava (Manihot esculenta)
err2022-09-21
err7
errOAAI
errBakare, Moshood A. A.; Kayondo, Siraj Ismail; Aghogho, Cynthia I. I.; Wolfe, Marnin D. D.; Parkes, Elizabeth Y. Y.; Kulakow, Peter; Egesi, Chiedozie; Jannink, Jean-Luc; Rabbi, Ismail Yusuf
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GrainGenes: a data-rich repository for small grains genetics and genomics
err2022-05-25
err49
errOAAI
errYao, Eric; Blake, Victoria C.; Cooper, Laurel; Wight, Charlene P.; Michel, Steve; Cagirici, H. Busra; Lazo, Gerard R.; Birkett, Clay L.; Waring, David J.; Jannink, Jean-Luc; Holmes, Ian; Waters, Amanda J.; Eickholt, David P.; Sen, Taner Z.
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Generalizable approaches for genomic prediction of metabolites in plants
err2022-04-25
err9
errOAAI
errBrzozowski, Lauren J.; Campbell, Malachy T.; Hu, Haixiao; Caffe, Melanie; Gutierrez, Lucia; Smith, Kevin P.; Sorrells, Mark E.; Gore, Michael A.; Jannink, Jean-Luc
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