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Agnès Bouchez

Universite Savoie Mont Blanc

55H-index
287Paper Count
1.0WCitation Count
Published Papers 56
Publication Date
Assessing the relevance of DNA metabarcoding compared to morphological identification for lake phytoplankton monitoring
err2024-03-01
err8
PREAI
errGelis, Maria Mercedes Nicolosi; Canino, Alexis; Bouchez, Agnes; Domaizon, Isabelle; Laplace-Treyture, Christophe; Rimet, Frederic; Alric, Benjamin
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Diatom DNA metabarcoding to assess the effect of natural radioactivity in mineral springs on ASV of benthic diatom communities
err2023-05-01
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errOAAI
errBaker, Lory-Anne; Beauger, Aude; Kolovi, So fia; Voldoire, Olivier; Allain, Elisabeth; Breton, Vincent; Chardon, Patrick; Miallier, Didier; Bailly, Celine; Montavon, Gilles; Bouchez, Agnes; Rimet, Frederic; Chardon, Cecile; Vasselon, Valentin; Ector, Luc; Wetzel, Carlos E.; Biron, David G.
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Diatom endemism and taxonomic turnover: Assessment in high-altitude alpine lakes covering a large geographical range
err2023-05-01
err10
errOAAI
errRimet, Frederic; Pinseel, Eveline; Bouchez, Agnes; Japoshvili, Bella; Mumladze, Levan
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Evidence of Bacterial Community Coalescence between Freshwater and Discharged tpm-Harboring Bacterial Taxa from Hospital and Domestic Wastewater Treatment Plants among Epilithic Biofilms
err2023-04-02
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errOAAI
errBouchali, Rayan; Marjolet, Laurence; Mondamert, Leslie; Chonova, Teofana; Ribun, Sebastien; Laurent, Elodie; Bouchez, Agnes; Labanowski, Jerome; Cournoyer, Benoit
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Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
err2022-04-01
err107
errOAAI
errPawlowski, J.; Bruce, K.; Panksep, K.; Aguirre, F., I; Amalfitano, S.; Apotheloz-Perret-Gentil, L.; Baussant, T.; Bouchez, A.; Carugati, L.; Cermakova, K.; Cordier, T.; Corinaldesi, C.; Costa, F. O.; Danovaro, R.; Dell'Anno, A.; Duarte, S.; Eisendle, U.; Ferrari, B. J. D.; Frontalini, F.; Fruehe, L.; Haegerbaeumer, A.; Kisand, V; Krolicka, A.; Lanzen, A.; Leese, F.; Lejzerowicz, F.; Lyautey, E.; Macek, I; Sagova-Mareckova, M.; Pearman, J. K.; Pochon, X.; Stoeck, T.; Vivien, R.; Weigand, A.; Fazi, S.
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Passive sampling of environmental DNA in aquatic environments using 3D-printed hydroxyapatite samplers
err2022-03-18
err19
errOAAI
errVerdier, Heloise; Konecny-Dupre, Lara; Marquette, Christophe; Reveron, Helen; Tadier, Solene; Gremillard, Laurent; Barthes, Amelie; Datry, Thibault; Bouchez, Agnes; Lefebure, Tristan
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Fish eDNA metabarcoding from aquatic biofilm samples: Methodological aspects
err2021-12-14
err24
PREAI
errRivera, Sinziana F.; Rimet, Frederic; Vasselon, Valentin; Vautier, Marine; Domaizon, Isabelle; Bouchez, Agnes
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Herbicide-Induced Shifts in the Periphyton Community Composition Indirectly Affect Feeding Activity and Physiology of the Gastropod Grazer Physella acuta
err2021-10-22
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errOAAI
errKonschak, Marco; Zubrod, Jochen P.; Acosta, Tomas S. Duque; Bouchez, Agnes; Kroll, Alexandra; Feckler, Alexander; Roeder, Nina; Baudy, Patrick; Schulz, Ralf; Bundschuh, Mirco
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Unlocking our understanding of intermittent rivers and ephemeral streams with genomic tools
err2021-09-09
err13
errOAAI
errBlackman, Rosetta C.; Altermatt, Florian; Foulquier, Arnaud; Lefebure, Tristan; Gauthier, Mailys; Bouchez, Agnes; Stubbington, Rachel; Weigand, Alexander M.; Leese, Florian; Datry, Thibault
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A pilot experiment to assess the efficiency of pharmaceutical plant wastewater treatment and the decreasing effluent toxicity to periphytic biofilms
err2021-06-01
err11
PREAI
errTardy, Vincent; Bonnineau, Chloe; Bouchez, Agnes; Miege, Cecile; Masson, Matthieu; Jeannin, Pierric; Pesce, Stephane
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Exploring the capacity of aquatic biofilms to act as environmental DNA samplers: Test on macroinvertebrate communities in rivers
err2021-04-01
err19
errOAAI
errRivera, Sinziana F.; Vasselon, Valentin; Mary, Nathalie; Monnier, Olivier; Rimet, Frederic; Bouchez, Agnes
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The potential of exact sequence variants (ESVs) to interpret and assess the impact of agricultural pressure on stream diatom assemblages revealed by DNA metabarcoding
err2021-03-01
err35
errOAAI
errTapolczai, Kalman; Selmeczy, Geza B.; Szabo, Beata; B-Beres, Viktoria; Keck, Francois; Bouchez, Agnes; Rimet, Frederic; Padisak, Judit
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Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring
err2021-03-01
err127
errOAAI
errSagova-Mareckova, M.; Boenigk, J.; Bouchez, A.; Cermakova, K.; Chonova, T.; Cordier, T.; Eisendle, U.; Elersek, T.; Fazi, S.; Fleituch, T.; Fruhe, L.; Gajdosova, M.; Graupner, N.; Haegerbaeumer, A.; Kelly, A. -M.; Kopecky, J.; Leese, F.; Noges, P.; Orlic, S.; Panksep, K.; Pawlowski, J.; Petrusek, A.; Piggott, J. J.; Rusch, J. C. S.; Salis, R.; Schenk, J.; Simek, K.; Stovicek, A.; Strand, D. A.; Vasquez, M. I.; Vralstad, T.; Zlatkovic, S.; Zupancic, M.; Stoeck, T.
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Environmental filtering and limiting similarity as main forces driving diatom community structure in Mediterranean and continental temporary and perennial streams
err2020-11-01
err36
errOAAI
errVarbiro, Gabor; Borics, Gabor; Novais, Maria Helena; Morais, Maria Manuela; Rimet, Frederic; Bouchez, Agnes; Tapolczai, Kalman; Bacsi, Istvan; Usseglio-Polatera, Philippe; B-Beres, Viktoria
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Evaluation and sensitivity analysis of diatom DNA metabarcoding for WFD bioassessment of Mediterranean rivers
err2020-07-01
err47
PREAI
errPerez-Burillo, Javier; Trobajo, Rosa; Vasselon, Valentin; Rimet, Frederic; Bouchez, Agnes; Mann, David G.
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Benthic diatom community dynamics in Mediterranean intermittent streams: Effects of water availability and their potential as indicators of dry-phase ecological status
err2020-06-01
err22
errOAAI
errNovais, Maria Helena; Morales, Eduardo A.; Penha, Alexandra Marcha; Potes, Miguel; Bouchez, Agnes; Barthes, Amelie; Costa, Maria Joao; Salgado, Rui; Santos, Jorge; Morais, Manuela
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A taxonomy-free approach based on machine learning to assess the quality of rivers with diatoms
err2020-06-01
err33
PREAI
errFeio, Maria Joao; Serra, Sonia R. Q.; Mortagua, Andreia; Bouchez, Agnes; Rimet, Frederic; Vasselon, Valentin; Almeida, Salome F. P.
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The vertical distribution of tetA and intI1 in a deep lake is rather due to sedimentation than to resuspension
err2020-01-11
err20
PREAI
errDi Cesare, Andrea; Eckert, Ester M.; Cottin, Camille; Bouchez, Agnes; Callieri, Cristiana; Cortesini, Mario; Lami, Andrea; Corno, Gianluca
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Key Questions for Next-Generation Biomonitoring
err2020-01-09
err66
errOAAI
errMakiola, Andreas; Compson, Zacchaeus G.; Baird, Donald J.; Barnes, Matthew A.; Boerlijst, Sam P.; Bouchez, Agnes; Brennan, Georgina; Bush, Alex; Canard, Elsa; Cordier, Tristan; Creer, Simon; Curry, R. Allen; David, Patrice; Dumbrell, Alex J.; Gravel, Dominique; Hajibabaei, Mehrdad; Hayden, Brian; van der Hoorn, Berry; Jarne, Philippe; Jones, J. Iwan; Karimi, Battle; Keck, Francois; Kelly, Martyn; Knot, Ineke E.; Krol, Louie; Massol, Francois; Monk, Wendy A.; Murphy, John; Pawlowski, Jan; Poisot, Timothee; Porter, Teresita M.; Randall, Kate C.; Ransome, Emma; Ravigne, Virginie; Raybould, Alan; Robin, Stephane; Schrama, Maarten; Schatz, Bertrand; Tamaddoni-Nezhad, Alireza; Trimbos, Krijn B.; Vacher, Corinne; Vasselon, Valentin; Wood, Susie; Woodward, Guy; Bohan, David A.
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