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David Berry

medical university of vienna and university of vienna

58H-index
269Paper Count
1.5WCitation Count
Published Papers 118
Publication Date
Benchmarking of shotgun sequencing depth reveals the potential and limitations of shallow metagenomics and strain-level analysis
err2026-04-21
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errOAAI
errNicole S. Treichel; Charlie Pauvert; Joana Séneca; Petra Pjevac; David Berry; John Penders; Thomas C. A. Hitch; Thomas Clavel
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Mesoporous Silica Nanoparticles-Based Formulations for Enhanced Oral Delivery of Peptide Drugs: A Case Study on Insulin
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IF12.1
err2026-03-22
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errOAAI
errClaudia Iriarte-Mesa; Estelle Juère; Andrea Bileck; Thomas Kremsmayr; Michael L. Goodson; Allison Ehrlich; Adnan Hodžić; Martin Kunert; Christopher Gerner; Hanspeter Kählig; Doris Marko; Markus Muttenthaler; David Berry; Giorgia Del Favero; Freddy Kleitz
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DNA reference reagents isolate biases in microbiome profiling: a global multi-lab study
err2025-10-01
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PREAI
errAnwar, Saba; Lamaudiere, Matthew; Hassall, Jack; Dehinsilu, Jacob; Bhuller, Ravneet K.; Hold, Georgina L.; Vazquez-Campos, Xabier; Mahnert, Alexander; Moissl-Eichinger, Christine; Galle, Birgit; Kainz, Gudrun; Pjevac, Petra; Hausmann, Bela; Schwarz, Jasmin; Kohl, Gudrun; Berry, David; Vancuren, Sarah J.; Allen-Vercoe, Emma; Nielsen, Nynne; Sorensen, Nikolaj; Eklund, Aron; Nielsen, Henrik Bjorn; Riedel, Rene; Krause, Jannike Lea; Chang, Hyun-Dong; Park, Suenie; Song, Ho-Yeon; Seo, Hoonhee; ul-Haq, Asad; Kim, Sukyung; Kwon, Yongbin; Park, Sunwha; Soberon, Xavier; Silva-Herzog, Eugenia; Verlouw, Joost A. M.; Arp, Pascal; Jhamai, Mila; Kraaij, Robert; Geelen, Anoecim R.; Ducarmon, Quinten R.; Smits, Wiep Klaas; Kuijper, Ed J.; Zwittink, Romy D.; van Best, Niels; Penders, John; Le, Giang; Driessen, Christel; Kool, Jolanda; Shetty, Sudarshan A.; Fuentes, Susana; Demirci, Mehmet; Yigin, Akin; Whalley, Celina; Beggs, Andrew D.; Quince, Christopher; James, Rob; Raguideau, Sebastien; Gordon, Martin; Mate, Ryan; Fritzsche, Martin; Danckert, Nathan P.; Blanco, Jesus Miguens; Marchesi, Julian R.; Rauch, Marcus; Williamson, R. Anthony; van't Wout, Angelique B.; Kritz, Angelika; Rosecker, Stephan; Stevens, Richard; Laws, Lynette; Sayavedra, Lizbeth; Romano, Stefano; Telatin, Andrea; Baker, David; Narbad, Arjan; Servetas, Stephanie L.; Kralj, Jason G.; Forry, Samuel P.; Hunter, Monique E.; Dootz, Jennifer N.; Jackson, Scott A.; Mason, Christopher E.; Butler, Daniel J.; Mozsary, Christopher; Foox, Jonathan; Damle, Namita; Resh, Aidan; Busswitz, Amanda; Lenz, Peter; Sontag, Shane; Cross, Andrew; Sanchez, Christian; Guo, Mingsheng; Olson, Kayla; Smith, Eric A.; La Reau, Alex J.; Ward, Tonya; Kuersten, Scott; Hyde, Fred; Khrebtukova, Irina; Schroth, Gary; Rijpkema, Sjoerd; Amos, Gregory C. A.; Sergaki, Chrysi
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Lactulose selectively stimulates members of the gut microbiota, as determined by multi-modal activity-based sorting
err2025-06-27
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errOAAI
errHamid Rasoulimehrabani; Alessandra Riva; Deniz Inan; Adnan Hodžić; Bela Hausmann; Georgi Nikolov; Sanaz Khadem; Norbert Hieger; Julia Wiesenbauer; Christina Kaiser; Verena Filz; Thomas Böttcher; David Berry
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Bariatric surgery promotes recruitment of brown fat linked to alterations in the gut microbiota
err2025-05-14
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errHerz, Carsten T.; Kulterer, Oana C.; Prager, Marlene; Marculescu, Rodrig; Prager, Gerhard; Kautzky-Willer, Alexandra; Hacker, Marcus; Trajanoski, Slave; Koefeler, Harald C.; Galle, Birgit; Haug, Alexander R.; Berry, David; Kiefer, Florian W.
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A Pilot Study on the Impact of Cranberry and Ascorbic Acid Supplementation on the Urinary Microbiome of Healthy Women: A Randomized Controlled Trial
err2025-03-07
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errNussbaumer-Proell, Alina; Hausmann, Bela; Weber, Maria; Pjevac, Petra; Berry, David; Zeitlinger, Markus
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Shewanella is a putative producer of polyunsaturated fatty acids in the gut soil of the composting earthworm Eisenia fetida
err2025-02-19
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errWittlinger, Jan-Philpp; Castejon, Natalia; Hausmann, Bela; Berry, David; Schnorr, Stephanie L.
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Human-derived microRNA 21 regulates indole and L-tryptophan biosynthesis transcripts in the gut commensal Bacteroides thetaiotaomicron
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IF4.7
err2025-01-29
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errFlanagan, Kayla; Gassner, Kirsten; Lang, Michaela; Ozelyte, Jurgita; Hausmann, Bela; Crepaz, Daniel; Pjevac, Petra; Gasche, Christoph; Berry, David; Vesely, Cornelia; Pereira, Fatima C.
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Gut microbiota genome features associated with brain injury in extremely premature infants
err2024-10-07
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errSeki, David; Kirkegaard, Rasmus; Osvatic, Jay; Hausmann, Bela; Seneca, Joana; Pjevac, Petra; Berger, Angelika; Hall, Lindsay J.; Wisgrill, Lukas; Berry, David
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Adaptation to tolerate high doses of arabinoxylan is associated with fecal levels of Bifidobacterium longum
err2024-06-11
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errDeehan, Edward C.; Zhang, Zhengxiao; Nguyen, Nguyen K.; Perez-Munoz, Maria Elisa; Cole, Janis; Riva, Alessandra; Berry, David; Prado, Carla M.; Walter, Jens
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Insights into the early-life chemical exposome of Nigerian infants and potential correlations with the developing gut microbiome
err2024-06-01
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errOesterle, Ian; Ayeni, Kolawole I.; Ezekiel, Chibundu N.; Berry, David; Rompel, Annette; Warth, Benedikt
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Neuroactive metabolites and bile acids are altered in extremely premature infants with brain injury
err2024-04-01
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errPristner, Manuel; Wasinger, Daniel; Seki, David; Klebermass-Schrehof, Katrin; Berger, Angelika; Berry, David; Wisgrill, Lukas; Warth, Benedikt
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MANNosylation of Mesoporous Silica Nanoparticles Modifies TLR4 Localization and NF-κB Translocation in T24 Bladder Cancer Cells
err2024-03-30
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errHohagen, Mariam; Sanchez, Laura; Herbst, Ann-Jacqueline; Kaehlig, Hanspeter; Shin, Jae Won; Berry, David; Del Favero, Giorgia; Kleitz, Freddy
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Enhancing microbiome research in sub-Saharan Africa
err2024-02-01
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errAyeni, Kolawole I.; Berry, David; Ezekiel, Chibundu N.; Warth, Benedikt
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The maternal microbiome in pregnancy, delivery, and early-stage development of neonatal microbiome after cesarean section: A prospective longitudinal study
err2024-01-24
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errFoessleitner, Philipp; Pjevac, Petra; Granser, Sonja; Wisgrill, Lukas; Pummer, Lisa; Eckel, Fanny; Seki, David; Berry, David; Hausmann, Bela; Farr, Alex
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Biomonitoring of Dietary Mycotoxin Exposure and Associated Impact on the Gut Microbiome in Nigerian Infants
err2024-01-22
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errOAAI
errAyeni, Kolawole I.; Seki, David; Pjevac, Petra; Hausmann, Bela; Krausova, Magdalena; Braun, Dominik; Wisgrill, Lukas; Berry, David; Warth, Benedikt; Ezekiel, Chibundu N.
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Identification of inulin-responsive bacteria in the gut microbiota via multi-modal activity-based sorting
err2023-12-14
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errRiva, Alessandra; Rasoulimehrabani, Hamid; Cruz-Rubio, Jose Manuel; Schnorr, Stephanie L.; von Baeckmann, Cornelia; Inan, Deniz; Nikolov, Georgi; Herbold, Craig W.; Hausmann, Bela; Pjevac, Petra; Schintlmeister, Arno; Spittler, Andreas; Palatinszky, Marton; Kadunic, Aida; Hieger, Norbert; Del Favero, Giorgia; von Bergen, Martin; Jehmlich, Nico; Watzka, Margarete; Lee, Kang Soo; Wiesenbauer, Julia; Khadem, Sanaz; Viernstein, Helmut; Stocker, Roman; Wagner, Michael; Kaiser, Christina; Richter, Andreas; Kleitz, Freddy; Berry, David
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