Not logged in Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane (vol 7, 242 , 2024) Shrestha, Rebika; Carpenter, Timothy S.; Van, Que N.; Agamasu, Constance; Tonelli, Marco; Aydin, Fikret; Chen, De; Gulten, Gulcin; Glosli, James N.; Lopez, Cesar A.; Oppelstrup, Tomas; Neale, Chris; Gnanakaran, Sandrasegaram; Gillette, William K.; Ingolfsson, Helgi I.; Lightstone, Felice C.; Stephen, Andrew G.; Streitz, Frederick H.; Nissley, Dwight V.; Turbyville, Thomas J. Share Save
Membrane lipids drive formation of KRAS4b-RAF1 RBDCRD nanoclusters on the membrane Shrestha, Rebika; Carpenter, Timothy S.; Van, Que N.; Agamasu, Constance; Tonelli, Marco; Aydin, Fikret; Chen, De; Gulten, Gulcin; Glosli, James N.; Lopez, Cesar A.; Oppelstrup, Tomas; Neale, Chris; Gnanakaran, Sandrasegaram; Gillette, William K.; Ingolfsson, Helgi I.; Lightstone, Felice C.; Stephen, Andrew G.; Streitz, Frederick H.; Nissley, Dwight V.; Turbyville, Thomas J. Share Save
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Exploring CRD mobility during RAS/RAF engagement at the membrane Nguyen, Kien; Lopez, Cesar A.; Neale, Chris; Van, Que N.; Carpenter, Timothy S.; Di Natale, Francesco; Travers, Timothy; Tran, Timothy H.; Chan, Albert H.; Bhatia, Harsh; Frank, Peter H.; Tonelli, Marco; Zhang, Xiaohua; Gulten, Gulcin; Reddy, Tyler; Burns, Violetta; Oppelstrup, Tomas; Hengartner, Nick; Simanshu, Dhirendra K.; Bremer, Peer-Timo; Chen, De; Glosli, James N.; Shrestha, Rebika; Turbyville, Thomas; Streitz, Frederick H.; Nissley, Dwight V.; Ingolfsson, Helgi I.; Stephen, Andrew G.; Lightstone, Felice C.; Gnanakaran, Sandrasegaram Share Save
Asynchronous Reciprocal Coupling of Martini 2.2 Coarse-Grained and CHARMM36 All-Atom Simulations in an Automated Multiscale Framework Lopez, Cesar A.; Zhang, Xiaohua; Aydin, Fikret; Shrestha, Rebika; Van, Que N.; Stanley, Christopher B.; Carpenter, Timothy S.; Nguyen, Kien; Patel, Lara A.; Chen, De; Burns, Violetta; Hengartner, Nicolas W.; Reddy, Tyler J. E.; Bhatia, Harsh; Di Natale, Francesco; Tran, Timothy H.; Chan, Albert H.; Simanshu, Dhirendra K.; V. Nissley, Dwight; Streitz, Frederick H.; Stephen, Andrew G.; Turbyville, Thomas J.; Lightstone, Felice C.; Gnanakaran, Sandrasegaram; Ingolfsson, Helgi I.; Neale, Chris Share Save
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Machine learning-driven multiscale modeling reveals lipid-dependent dynamics of RAS signaling proteins Ingolfsson, Helgi I.; Neale, Chris; Carpenter, Timothy S.; Shrestha, Rebika; Lopez, Cesar A.; Tran, Timothy H.; Oppelstrup, Tomas; Bhatia, Harsh; Stanton, Liam G.; Zhang, Xiaohua; Sundram, Shiv; Di Natale, Francesco; Agarwal, Animesh; Dharuman, Gautham; Schumacher, Sara I. L. Kokkila; Turbyville, Thomas; Gulten, Gulcin; Van, Que N.; Goswami, Debanjan; Jean-Francois, Frantz; Agamasu, Constance; Chen, De; Hettige, Jeevapani J.; Travers, Timothy; Sarkar, Sumantra; Surh, Michael P.; Yang, Yue; Moody, Adam; Liu, Shusen; Van Essen, Brian C.; Voter, Arthur F.; Ramanathan, Arvind; Hengartner, Nicolas W.; Simanshu, Dhirendra K.; Stephen, Andrew G.; Bremer, Peer-Timo; Gnanakaran, S.; Glosli, James N.; Lightstone, Felice C.; McCormick, Frank; Nissley, Dwight, V; Streitz, Frederick H. Share Save
Machine-learning-based dynamic-importance sampling for adaptive multiscale simulations Bhatia, Harsh; Carpenter, Timothy S.; Ingolfsson, Helgi I.; Dharuman, Gautham; Karande, Piyush; Liu, Shusen; Oppelstrup, Tomas; Neale, Chris; Lightstone, Felice C.; Van Essen, Brian; Glosli, James N.; Bremer, Peer-Timo Share Save
Ligand modulation of the conformational dynamics of the A2A adenosine receptor revealed by single-molecule fluorescence Fernandes, Dennis D.; Neale, Chris; Gomes, Gregory-Neal W.; Li, Yuchong; Malik, Aimen; Pandey, Aditya; Orazietti, Alexander P.; Wang, Xudong; Ye, Libin; Prosser, R. Scott; Gradinaru, Claudiu C. Share Save
KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation Tran, Timothy H.; Chan, Albert H.; Young, Lucy C.; Bindu, Lakshman; Neale, Chris; Messing, Simon; Dharmaiah, Srisathiyanarayanan; Taylor, Troy; Denson, John-Paul; Esposito, Dominic; Nissley, Dwight V.; Stephen, Andrew G.; McCormick, Frank; Simanshu, Dhirendra K. Share Save
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Mechanistic insights into allosteric regulation of the A2A adenosine G protein-coupled receptor by physiological cations Ye, Libin; Neale, Chris; Sljoka, Adnan; Lyda, Brent; Pichugin, Dmitry; Tsuchimura, Nobuyuki; Larda, Sacha T.; Pomes, Regis; Garcia, Angel E.; Ernst, Oliver P.; Sunahara, Roger K.; Prosser, R. Scott Share Save
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