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Andrei Tokmakoff

university of chicago

76H-index
344Paper Count
1.9WCitation Count
Published Papers 110
Publication Date
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Using Multiple Isotope-Labeled Infrared Spectra for the Structural Characterization of an Intrinsically Disordered Peptide
errThe Journal of Physical Chemistry B
IF2.9
err2025-11-05
err0
PREAI
errIan J. A. Bongalonta; Aaron R. Dinner; Andrei Tokmakoff
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Kinetics and dynamics of oligonucleotide hybridization
errNATURE REVIEWS CHEMISTRY
IF51.7
err2025-04-11
err0
PREAI
errAshwood, Brennan; Tokmakoff, Andrei
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errSave
Molecular Tuning of Reactivity of Zeolite Protons in HZSM-5
errJOURNAL OF THE AMERICAN CHEMICAL SOCIETY
IF15.6
err2024-04-04
err1
PREAI
errChen, Yaxin; Ma, Xinyou; Hack, John H.; Zhang, Shuhao; Peng, Anyang; Dombrowski, James P.; Voth, Gregory A.; Tokmakoff, Andrei; Kung, Mayfair C.; Kung, Harold H.
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Molecular factors determining brightness in fluorescence-encoded infrared vibrational spectroscopy
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2024-03-08
err2
errOAAI
errGuha, Abhirup; Whaley-Mayda, Lukas; Lee, Seung Yeon; Tokmakoff, Andrei
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Anomalously enhanced ion transport and uptake in functionalized angstrom- scale two- dimensional channels
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2024-01-02
err2
errOAAI
errWang, Mingzhan; Sadhukhan, Tumpa; Lewis, Nicholas H. C.; Wang, Maoyu; He, Xiang; Yan, Gangbin; Ying, Dongchen; Hoenig, Eli; Han, Yu; Peng, Guiming; Lee, One-Sun; Shi, Fengyuan; Tiede, David M.; Zhou, Hua; Tokmakoff, Andrei; Schatz, George C.; Liu, Chong
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Molecular insight into how the position of an abasic site modifies DNA duplex stability and dynamics
errBIOPHYSICAL JOURNAL
IF3.1
err2024-01-01
err3
errOAAI
errAshwood, Brennan; Jones, Michael S.; Lee, Yumin; Sachleben, Joseph R.; Ferguson, Andrew L.; Tokmakoff, Andrei
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errSave
Development and Characterization of Electrodes for Surface-Specific Attenuated Total Reflection Two-Dimensional Infrared Spectroelectrochemistry
errJOURNAL OF PHYSICAL CHEMISTRY C
IF3.2
err2023-11-28
err1
errOAAI
errBodine, Melissa; Rozyyev, Vepa; Elam, Jeffrey W.; Tokmakoff, Andrei; Lewis, Nicholas H. C.
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Multimode vibrational dynamics and orientational effects in fluorescence-encoded infrared spectroscopy. II. Analysis of early-time signals
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2023-11-15
err4
PREAI
errWhaley-Mayda, Lukas; Guha, Abhirup; Tokmakoff, Andrei
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Multimode vibrational dynamics and orientational effects in fluorescence-encoded infrared spectroscopy. I. Response function theory
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2023-11-15
err6
PREAI
errWhaley-Mayda, Lukas; Guha, Abhirup; Tokmakoff, Andrei
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Proton Dissociation and Delocalization under Stepwise Hydration of Zeolite HZSM-5
errJOURNAL OF PHYSICAL CHEMISTRY C
IF3.2
err2023-08-09
err10
errOAAI
errHack, John H.; Ma, Xinyou; Chen, Yaxin; Dombrowski, James P.; Lewis, Nicholas H. C.; Li, Chenghan; Kung, Harold H.; Voth, Gregory A.; Tokmakoff, Andrei
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errSave
Thermodynamics and kinetics of DNA and RNA dinucleotide hybridization to gaps and overhangs
errBIOPHYSICAL JOURNAL
IF3.1
err2023-08-01
err8
errOAAI
errAshwood, Brennan; Jones, Michael S.; Radakovic, Aleksandar; Khanna, Smayan; Lee, Yumin; Sachleben, Joseph R.; Szostak, Jack W.; Ferguson, Andrew L.; Tokmakoff, Andrei
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errSave
Disruption of energetic and dynamic base pairing cooperativity in DNA duplexes by an abasic site
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-03-28
err8
errOAAI
errAshwood, Brennan; Jones, Michael S.; Ferguson, Andrew L.; Tokmakoff, Andrei
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errSave
Amplification of mid-IR continuum for broadband 2D IR spectroscopy
errOPTICS LETTERS
IF3.3
err2023-02-08
err4
errOAAI
errHack, John H.; Lewis, Nicholas H. C.; Carpenter, William B.; Tokmakoff, Andrei
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errSave
Resonance conditions, detection quality, and single-molecule sensitivity in fluorescence-encoded infrared vibrational spectroscopy
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2022-05-02
err14
PREAI
errWhaley-Mayda, Lukas; Guha, Abhirup; Tokmakoff, Andrei
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errSave
Water or Anion? Uncovering the Zn2+ Solvation Environment in MixedZn (TFSI)2 and LiTFSI Water-in-Salt Electrolytes (vol 6, pg 3458, 2021)
errACS ENERGY LETTERS
IF18.2
err2022-04-19
err2
PREAI
errZhang, Yong; Wan, Gang; Lewis, Nicholas H. C.; Mars, Julian; Bone, Sharon; Diaeresisck, Hans-Georg Steinruspacing; Lukatskaya, Maria R.; Weadock, Nicholas J.; Bajdich, Michal; Borodin, Oleg; Tokmakoff, Andrei; Toney, Michael F.; Maginn, Edward J.
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Characterization of Acetonitrile Isotopologues as Vibrational Probes of Electrolytes
errJOURNAL OF PHYSICAL CHEMISTRY B
IF2.9
err2021-12-28
err24
errOAAI
errDereka, Bogdan; Lewis, Nicholas H. C.; Keim, Jonathan H.; Snyder, Scott A.; Tokmakoff, Andrei
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Determining Sequence-Dependent DNA Oligonucleotide Hybridization and Dehybridization Mechanisms Using Coarse-Grained Molecular Simulation, Markov State Models, and Infrared Spectroscopy
errJOURNAL OF THE AMERICAN CHEMICAL SOCIETY
IF15.6
err2021-10-13
err23
errOAAI
errJones, Michael S.; Ashwood, Brennan; Tokmakoff, Andrei; Ferguson, Andrew L.
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errSave
Water or Anion? Uncovering the Zn2+ Solvation Environment in Mixed Zn(TFSI)2 and LiTFSI Water-in-Salt Electrolytes
errACS ENERGY LETTERS
IF18.2
err2021-09-08
err58
errOAAI
errZhang, Yong; Wan, Gang; Lewis, Nicholas H. C.; Mars, Julian; Bone, Sharon E.; Steinrueck, Hans-Georg; Lukatskaya, Maria R.; Weadock, Nicholas J.; Bajdich, Michal; Borodin, Oleg; Tokmakoff, Andrei; Toney, Michael F.; Maginn, Edward J.
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errSave
Structural Characterization of Protonated Water Clusters Confined in HZSM-5 Zeolites
errJOURNAL OF THE AMERICAN CHEMICAL SOCIETY
IF15.6
err2021-07-01
err50
PREAI
errHack, John H.; Dombrowski, James P.; Ma, Xinyou; Chen, Yaxin; Lewis, Nicholas H. C.; Carpenter, William B.; Li, Chenghan; Voth, Gregory A.; Kung, Harold H.; Tokmakoff, Andrei
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errSave
Water-in-Salt LiTFSI Aqueous Electrolytes. 1. Liquid Structure from Combined Molecular Dynamics Simulation and Experimental Studies
errJOURNAL OF PHYSICAL CHEMISTRY B
IF2.9
err2021-04-27
err67
PREAI
errZhang, Yong; Lewis, Nicholas H. C.; Mars, Julian; Wan, Gang; Weadock, Nicholas J.; Takacs, Christopher J.; Lukatskaya, Maria R.; Steinrueck, Hans-Georg; Toney, Michael F.; Tokmakoff, Andrei; Maginn, Edward J.
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Research Directions

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Co-authors
Cooperation Journals
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M. S. Dresselhaus
H-index: 167 · Papers: 1.8K
C
Chuan He
H-index: 161 · Papers: 978
M
Moungi G. Bawendi
H-index: 160 · Papers: 719
G
George C. Schatz
H-index: 156 · Papers: 1.7K
M
Michael F. Toney
H-index: 140 · Papers: 1.0K
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