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D

Daniel Herschlag

stanford university

92H-index
425Paper Count
2.9WCitation Count
Published Papers 167
Publication Date
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Quantifying protein unfolding kinetics with a high-throughput microfluidic platform
errCell Systems
IF7.7
err2026-07-29
err0
errOAAI
errBeatriz Atsavapranee; Fanny Sunden; Daniel Herschlag; Polly M. Fordyce
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errSave
Thermodynamic prediction of RNA cellular activity from sequence via conformational ensembles
errCell
IF42.5
err2026-03-18
err0
PREAI
errAinan Geng; Rohit Roy; Megan Ken; Linshu Li; Alicia Chime; Hala Abou Assi; Bei Liu; Charles Bou-Nader; Yeongjoon Lee; Jinwei Zhang; Daniel Herschlag; Stephen P. Goff; Hashim M. Al-Hashimi
errShare
errSave
Understanding how enzymes work: the journey to ensemble-function studies
errFEBS Journal
IF4.2
err2026-02-01
err0
errOAAI
errHerschlag, Daniel; Du, Siyuan
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errSave
SEISMICgraph: a web-based tool for RNA structure data visualization
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-08-12
err1
errOAAI
errWightman, Federico Fuchs; Yang, Grant; des Taillades, Yves J. Martin; L'Esperance-Kerckhoff, Casper; Grote, Scott; Allan, Matthew F.; Herschlag, Daniel; Rouskin, Silvi; Hagler, Lauren D.
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Exploring the energetic and conformational properties of the sequence space connecting naturally occurring RNA tetraloop receptor motifs
errRNA
IF5
err2024-10-03
err0
errOAAI
errShin, John H.; Cuevas, Lena M.; Roy, Rohit; Bonilla, Steve L.; Al-Hashimi, Hashim; Greenleaf, William J.; Herschlag, Daniel
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errSave
Decoupling of catalysis and transition state analog binding from mutations throughout a phosphatase revealed by high- throughput enzymology
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-07-10
err7
errOAAI
errMarkin, Craig J.; Mokhtari, Daniel A.; Du, Siyuan; Doukov, Tzanko; Sunden, Fanny; Cook, Jordan A.; Fordyce, Polly M.; Herschlag, Daniel
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Dissecting the energetic architecture within an RNA tertiary structural motif via high-throughput thermodynamic measurements
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-03-10
err3
errOAAI
errShin, John H.; Bonilla, Steve L.; Denny, Sarah K.; Greenleaf, William J.; Herschlag, Daniel
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errSave
Ensemble-function relationships to dissect mechanisms of enzyme catalysis
errSCIENCE ADVANCES
IF12.5
err2022-10-14
err25
errOAAI
errYabukarski, Filip; Doukov, Tzanko; Pinney, Margaux M.; Biel, Justin T.; Fraser, James S.; Herschlag, Daniel
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A comprehensive thermodynamic model for RNA binding by the Saccharomyces cerevisiae Pumilio protein PUF4
errNATURE COMMUNICATIONS
IF15.7
err2022-08-04
err3
errOAAI
errSadee, Christoph; Hagler, Lauren; Becker, Winston; Jarmoskaite, Inga; Vaidyanathan, Pavanapuresan; Denny, Sarah; Greenleaf, William; Herschlag, Daniel
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errSave
Direct Measurement of Interhelical DNA Repulsion and Attraction by Quantitative Cross-Linking
errJOURNAL OF THE AMERICAN CHEMICAL SOCIETY
IF15.6
err2022-01-24
err11
errOAAI
errHamilton, Ian; Gebala, Magdalena; Herschlag, Daniel; Russell, Rick
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Systematic investigation of the link between enzyme catalysis and cold adaptation
errELIFE
IF0
err2022-01-12
err9
PREAI
errStark, Catherine D.; Bautista-Leung, Teanna; Siegfried, Joanna; Herschlag, Daniel
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errSave
High throughput and quantitative enzymology in the genomic era
errCURRENT OPINION IN STRUCTURAL BIOLOGY
IF7
err2021-12-01
err21
errOAAI
errMokhtari, D. A.; Appel, M. J.; Fordyce, P. M.; Herschlag, D.
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errSave
uPIC-M: Efficient and Scalable Preparation of Clonal Single Mutant Libraries for High-Throughput Protein Biochemistry
errACS OMEGA
IF4.3
err2021-11-02
err5
errOAAI
errAppel, Mason J.; Longwell, Scott A.; Morri, Maurizio; Neff, Norma; Herschlag, Daniel; Fordyce, Polly M.
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errSave
High-throughput dissection of the thermodynamic and conformational properties of a ubiquitous class of RNA tertiary contact motifs
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2021-08-09
err9
errOAAI
errBonilla, Steve L.; Denny, Sarah K.; Shin, John H.; Alvarez-Buylla, Aurora; Greenleaf, William J.; Herschlag, Daniel
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errSave
Assessment of enzyme active site positioning and tests of catalytic mechanisms through X-ray-derived conformational ensembles
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2020-12-21
err46
errOAAI
errYabukarski, Filip; Biel, Justin T.; Pinney, Margaux M.; Doukov, Tzanko; Powers, Alexander S.; Fraser, James S.; Herschlag, Daniel
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errSave
Rapid and accurate determination of atomistic RNA dynamic ensemble models using NMR and structure prediction
errNATURE COMMUNICATIONS
IF15.7
err2020-11-02
err52
errOAAI
errShi, Honglue; Rangadurai, Atul; Abou Assi, Hala; Roy, Rohit; Case, David A.; Herschlag, Daniel; Yesselman, Joseph D.; Al-Hashimi, Hashim M.
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errSave
How to measure and evaluate binding affinities
errELIFE
IF0
err2020-08-06
err333
errOAAI
errJarmoskaite, Inga; AlSadhan, Ishraq; Vaidyanathan, Pavanapuresan P.; Herschlag, Daniel
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errSave
The individual and the team in collaborative science
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2020-07-14
err6
errOAAI
errHerschlag, Daniel
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errSave
The structural ensemble of a Holliday junction determined by X-ray scattering interference
errNUCLEIC ACIDS RESEARCH
IF13.1
err2020-06-29
err15
errOAAI
errZettl, Thomas; Shi, Xuesong; Bonilla, Steve; Sedlak, Steffen M.; Lipfert, Jan; Herschlag, Daniel
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errSave
Slow Molecular Recognition by RNA
errFASEB JOURNAL
IF4.2
err2020-04-19
err0
errOAAI
errSengupta, Raghuvir; Herschlag, Daniel
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
P
Patrick O. Brown
H-index: 152 · Papers: 383
X
Xiaowei Zhuang
H-index: 116 · Papers: 356
R
Russ B. Altman
H-index: 114 · Papers: 955
S
Steven Chu
H-index: 113 · Papers: 426
V
Vijay S. Pande
H-index: 110 · Papers: 494
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