Brandon Allen - Publications, H-index & Citations

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Brandon Allen

yale university

9H-index

25Paper Count

219Citation Count

Published Papers 10

Publication Date

Solving Constrained Optimization Problems Using Hybrid Qubit-Qumode Quantum Devices

Journal of Chemical Theory and Computation

IF5.5

2026-05-14

PREAI

Rishab Dutta; Brandon Allen; Chuzhi Xu; Nam P. Vu; Kun Liu; Fei Miao; Bing Wang; Amit Surana; Chen Wang; Yongshan Ding; Victor S. Batista

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Error-Mitigation Enabled Multicomponent Quantum Simulations beyond the Born–Oppenheimer Approximation

Journal of Chemical Theory and Computation

IF5.5

2026-02-10

PREAI

Delmar G. A Cabral; Brandon Allen; Fabijan Pavošević; Sharon Hammes-Schiffer; Pablo Díez-Valle; Jack S. Baker; Gaurav Saxena; Thi Ha Kyaw; Victor S. Batista

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Characterizing Conical Intersections of Nucleobases on Quantum Computers

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2025-01-28

OAAI

Wang, Yuchen; Cianci, Cameron; Avdic, Irma; Dutta, Rishab; Warren, Samuel; Allen, Brandon; Vu, Nam P.; Santos, Lea F.; Batista, Victor S.; Mazziotti, David A.

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Simulating Chemistry on Bosonic Quantum Devices

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2024-07-28

OAAI

Dutta, Rishab; Cabral, Delmar G. A.; Lyu, Ningyi; Vu, Nam P.; Wang, Yuchen; Allen, Brandon; Dan, Xiaohan; Cortinas, Rodrigo G.; Khazaei, Pouya; Schafer, Max; d Albornoz, Alejandro C. C.; Smart, Scott E.; Nie, Scott; Devoret, Michel H.; Mazziotti, David A.; Narang, Prineha; Wang, Chen; Whitfield, James D.; Wilson, Angela K.; Hendrickson, Heidi P.; Lidar, Daniel A.; Perez-Bernal, Francisco; Santos, Lea F.; Kais, Sabre; Geva, Eitan; Batista, Victor S.

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Kernel-elastic autoencoder for molecular design

PNAS NEXUS

IF3.8

2024-04-25

OAAI

Li, Haote; Shee, Yu; Allen, Brandon; Maschietto, Federica; Morgunov, Anton; Batista, Victor

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Boosting quantum amplitude exponentially in variational quantum algorithms

QUANTUM SCIENCE AND TECHNOLOGY

IF5

2023-10-10

OAAI

Kyaw, Thi Ha; Soley, Micheline B.; Allen, Brandon; Bergold, Paul; Sun, Chong; Batista, Victor S.; Aspuru-Guzik, Alan

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MDiGest: A Python package for describing allostery from molecular dynamics simulations

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2023-06-05

OAAI

Maschietto, Federica; Allen, Brandon; Kyro, Gregory W.; Batista, Victor S.

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Mapping N- to C-terminal allosteric coupling through disruption of a putative CD74 activation site in D-dopachrome tautomerase

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2023-06-01

OAAI

Chen, Emily; Widjaja, Vinnie; Kyro, Gregory; Allen, Brandon; Das, Pragnya; Prahaladan, Varsha M.; Bhandari, Vineet; Lolis, Elias J.; Batista, Victor S.; Lisi, George P.

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Twisting and swiveling domain motions in Cas9 to recognize target DNA duplexes, make double-strand breaks, and release cleaved duplexes

FRONTIERS IN MOLECULAR BIOSCIENCES

IF4

2023-01-09

OAAI

Wang, Jimin; Arantes, Pablo R.; Ahsan, Mohd; Sinha, Souvik; Kyro, Gregory W.; Maschietto, Federica; Allen, Brandon; Skeens, Erin; Lisi, George P.; Batista, Victor S.; Palermo, Giulia

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A structurally preserved allosteric site in the MIF superfamily affects enzymatic activity and CD74 activation in D-dopachrome tautomerase

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2021-09-01

OAAI

Chen, Emily; Reiss, Krystle; Shah, Dilip; Manjula, Ramu; Allen, Brandon; Murphy, Eva L.; Murphy, James W.; Batista, Victor S.; Bhandari, Vineet; Lolis, Elias J.; Lisi, George P.

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Research Directions