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Protocol to set up the CellMinerCDB pharmacogenomics analysis web application with custom cell line data Elloumi, Fathi; Tlemsani, Camille; Heske, Christine M.; Pongor, Lorinc; Khandagale, Prashant; Varma, Sudhir; Meltzer, Paul S.; Khan, Javed; Reinhold, William C.; Pommier, Yves; Luna, Augustin Share Save
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The DNA Methyltransferase Inhibitor 5-Aza-4′-thio-2′-Deoxycytidine Induces C>G Transversions and Acute Lymphoid Leukemia Development Bertoli, Ryan M.; Chung, Yang Jo; Difilippantonio, Michael J.; Wokasch, Anthony; Marasco, Madison R. B.; Klimaszewski, Haley; Gammell, Susannah; Zhu, Yuelin J.; Walker, Robert L.; Cao, Dengchao; Khanna, Ajay; Walter, Matthew J.; Doroshow, James H.; Meltzer, Paul S.; Aplan, Peter D. Share Save
Native nanopore sequencing of multiple tumor sites reveals genetic and epigenetic intra-tumor heterogeneity in canine osteosarcoma Keskus, Ayse; Aganezov, Sergey; Ahmad, Tanveer; Dai, Xiaoguang; Walker, Robert; Beaulaurier, John; Hickey, Scott; Juul, Sissel; LeBlanc, Amy Kathleen; Meltzer, Paul S.; Kolmogorov, Mikhail Share Save
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5-Aza-4'-thio-2'-deoxycytidine induces C to G transversions in a specific trinucleotide context and leads to acute lymphoid leukemia Bertoli, Ryan Matthew; Chung, Yang Jo; Difilippantonio, Michael; Wokasch, Anthony; Marasco, Madison R.; Klimaszewski, Haley; Garber, Susannah; Zhu, Yuelin Jack; Walker, Robert L.; Cao, Dengchao; Doroshow, James; Meltzer, Paul; Aplan, Peter D. Share Save
Transcriptional profiling of canine osteosarcoma identifies prognostic gene expression signatures with translational value for humans Mannheimer, Joshua D.; Tawa, Gregory; Gerhold, David; Braisted, John; Sayers, Carly M.; McEachron, Troy A.; Meltzer, Paul; Mazcko, Christina; Beck, Jessica A.; LeBlanc, Amy K. Share Save
Targeting neddylation sensitizes colorectal cancer to topoisomerase I inhibitors by inactivating the DCAF13-CRL4 ubiquitin ligase complex Sun, Yilun; Baechler, Simone A.; Zhang, Xiaohu; Kumar, Suresh; Factor, Valentina M.; Arakawa, Yasuhiro; Chau, Cindy H.; Okamoto, Kanako; Parikh, Anup; Walker, Bob; Su, Yijun P.; Chen, Jiji; Ting, Tabitha; Huang, Shar-yin N.; Beck, Erin; Itkin, Zina; McKnight, Crystal; Xie, Changqing; Roper, Nitin; Nijhawan, Deepak; Figg, William Douglas; Meltzer, Paul S.; Yang, James C.; Thomas, Craig J.; Pommier, Yves Share Save
NUP98::Nsd1 and FLT3-ITD collaborate to generate acute myeloid leukemia Matsukawa, Toshihiro; Yin, Mianmian; Nigam, Nupur; Negi, Vijay; Li, Li; Small, Donald; Zhu, Yuelin J.; Walker, Robert L.; Meltzer, Paul S.; Aplan, Peter D. Share Save
Loss of LRRC15 in osteosarcoma cells disrupts extracellular matrix integration, intercellular communication, and differentiation Mukherjee, Sanjit; Jajoo, Ankit; Zhu, Jack; Pineda, Marbin; Walker, Robert; Purcell, James; Helman, Lee J.; Meltzer, Paul S. Share Save
Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins Goo, YH; Sohn, YC; Kim, DH; Kim, SW; Kang, MJ; Jung, DJ; Kwak, E; Barlev, NA; Berger, SL; Chow, VT; Roeder, RG; Azorsa, DO; Meltzer, PS; Suh, PG; Song, EJ; Lee, KJ; Lee, YC; Lee, JW Share Save
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A p21-ZEB1 Complex Inhibits Epithelial-Mesenchymal Transition through the MicroRNA 183-96-182 Cluster Li, Xiao Ling; Hara, Toshifumi; Choi, Youngeun; Subramanian, Murugan; Francis, Princy; Bilke, Sven; Walker, Robert L.; Pineda, Marbin; Zhu, Yuelin; Yang, Yuan; Luo, Ji; Wakefield, Lalage M.; Brabletz, Thomas; Park, Ben Ho; Sharma, Sudha; Chowdhury, Dipanjan; Meltzer, Paul S.; Lal, Ashish Share Save
A Circular RNA from the MDM2 Locus Controls Cell Cycle Progression by Suppressing p53 Levels Chaudhary, Ritu; Muys, Bruna R.; Grammatikakis, Ioannis; De, Supriyo; Abdelmohsen, Kotb; Li, Xiao Ling; Zhu, Yuelin; Daulatabad, Swapna Vidhur; Tsitsipatis, Dimitrios; Meltzer, Paul S.; Gorospe, Myriam; Janga, Sarath Chandra; Lal, Ashish Share Save
Genome-Wide Analysis of the FOXA1 Transcriptional Network Identifies Novel Protein-Coding and Long Noncoding RNA Targets in Colorectal Cancer Cells Lazar, Sarah B.; Pongor, Lorinc; Li, Xiao Ling; Grammatikakis, Ioannis; Muys, Bruna R.; Dangelmaier, Emily A.; Redon, Christophe E.; Jang, Sang-Min; Walker, Robert L.; Tang, Wei; Ambs, Stefan; Harris, Curtis C.; Meltzer, Paul S.; Aladjem, Mirit, I; Lal, Ashish Share Save
Mcm2 hypomorph leads to acute leukemia or hematopoietic stem cell failure, dependent on genetic context Matsukawa, Toshihiro; Yin, Mianmian; Baslan, Timour; Chung, Yang Jo; Cao, Dengchao; Bertoli, Ryan; Zhu, Yuelin J.; Walker, Robert L.; Freeland, Amy; Knudsen, Erik; Lowe, Scott W.; Meltzer, Paul S.; Aplan, Peter D. Share Save
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