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Melissa Haendel

university of north carolina at chapel hill

75H-index
608Paper Count
2.4WCitation Count
Published Papers 119
Publication Date
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The Cell Ontology in the age of single-cell omics
errScientific Data
IF6.9
err2026-04-24
err0
errOAAI
errShawn Zheng Kai Tan; Aleix Puig-Barbe; Damien Goutte-Gattat; Caroline Eastwood; Brian Aevermann; Alida Avola; James P. Balhoff; Ismail Ugur Bayindir; Jasmine Belfiore; Anita Reane Caron; David S. Fischer; Nancy George; Benjamin M. Gyori; Melissa A. Haendel; Charles Tapley Hoyt; Huseyin Kir; Tiago Lubiana; Nicolas Matentzoglu; James A. Overton; Beverly Peng; Bjoern Peters; Ellen M. Quardokus; Patrick L. Ray; Paola Roncaglia; Andrea D. Rivera; Ray Stefancsik; Wei Kheng Teh; Sabrina Toro; Nicole Vasilevsky; Chuan Xu; Yun Zhang; Richard H. Scheuermann; Christopher J. Mungall; Alexander D. Diehl; David Osumi-Sutherland
errShare
errSave
Wavelet-Based Pattern ERG Biomarkers Outperform Temporal Amplitude Measures for Functional Stratification in Optic Nerve Disease
errTranslational Vision Science & Technology
IF2.6
err2026-03-01
err1
PREAI
errShwetar, Yousif J.; Jeffrey, Brett G.; Haendel, Melissa A.
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errSave
Systematic benchmarking demonstrates large language models have not reached the diagnostic accuracy of traditional rare-disease decision support tools
errEuropean Journal of Human Genetics
IF4.6
err2026-02-24
err0
errOAAI
errJustin T. Reese; Leonardo Chimirri; Yasemin Bridges; Daniel Danis; J. Harry Caufield; Michael A. Gargano; Carlo Kroll; Andrew Schmeder; Fengchen Liu; Kyran Wissink; Julie A. McMurry; Adam S. L. Graefe; Enock Niyonkuru; Daniel R. Korn; Elena Casiraghi; Giorgio Valentini; Julius O. B. Jacobsen; Melissa Haendel; Damian Smedley; Christopher J. Mungall; Peter N. Robinson
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errSave
A practical introduction to wavelet analysis in electroretinography
errDocumenta Ophthalmologica
IF2.9
err2025-12-15
err0
errOAAI
errYousif J. Shwetar; David S. Lalush; Alice Y. Zhang; J. Jason McAnany; Brett G. Jeffrey; Melissa A. Haendel
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errSave
A systematic assessment of large language models' knowledge of rare diseases: How much do large language models know about rare disease?
errHuman Genetics and Genomics Advances
IF3.6
err2025-12-01
err2
errOAAI
errGroza, Tudor; Marcello, Allison J.; Carlisle, Tristan; Lim, Weng Khong; Haendel, Melissa; Karnani, Neerja; Robinson, Peter N.; Graessner, Holm; Chong, Jessica X.; Baynam, Gareth; Jamuar, Saumya Shekhar
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errSave
Medicines, Diseases, Indications, and Contraindications (MeDIC): a foundational resource to support drug repurposing
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-12-01
err0
errOAAI
errDeLuca, Marcello; Matentzoglu, Nico; Sharp, Elliott; Li, Jane; Hempstead, Charlie; Lim, May; Kaniewski, Piotr; Carter, E. Kathleen; Koirala, Kushal; Ding, Elvin; Vijnck, Laurens; Brokmeier, Pascal; Toro, Sabrina; Schaper, Kevin; Vergine, Jacques; Li, Olivia; Oprea, Tudor, I; Fajgenbaum, David C.; Bizon, Christopher; Haendel, Melissa; Tropsha, Alexander
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errSave
RareLink: scalable REDCap-based framework for rare disease interoperability linking international registries to FHIR and Phenopackets
errnpj Genomic Medicine
IF4.8
err2025-11-18
err0
errOAAI
errAdam S. L. Graefe; Filip Rehburg; Samer Alkarkoukly; Daniel Danis; Ana Grönke; Miriam R. Hübner; Alexander Bartschke; Thomas Debertshäuser; Sophie A. I. Klopfenstein; Julian Saß; Julia Fleck; Mirko Rehberg; Jana Zschüntzsch; Elisabeth F. Nyoungui; Tatiana Kalashnikova; Luis Murguía-Favela; Beata Derfalvi; Nicola A. M. Wright; Shahida Moosa; Soichi Ogishima; Oliver Semler; Susanna Wiegand; Peter Kühnen; Christopher J. Mungall; Melissa A. Haendel; Peter N. Robinson; Sylvia Thun; Oya Beyan
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errSave
The missing link: electronic health record linkage across species offers opportunities for improving One Health
errJAMIA Open
IF3.4
err2025-11-03
err0
errOAAI
errKathleen R Mullen, DVM, MS; Nadia Saklou, DVM, PhD; Adam Kiehl, MS; Toan C Ong, PhD; George Joseph Strecker, PhD; Sabrina Toro, PhD; Sue VandeWoude, DVM; Ian M Brooks, PhD; Tracy L Webb, DVM, PhD; Melissa A Haendel, PhD
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errSave
Development of self-phenotyping tools to empower patients and improve diagnostics
erreBioMedicine
IF10.8
err2025-10-30
err0
errOAAI
errKent Shefchek; Sonja I. Ziniel; Julie A. McMurry; Catherine A. Brownstein; John S. Brownstein; Erin Rooney Riggs; Matthew Might; Damian Smedley; Amy Clugston; Alan H. Beggs; Heather Paterson; Peter N. Robinson; Nicole A. Vasilevsky; Ingrid A. Holm; Melissa A. Haendel
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errSave
Consistent performance of large language models in rare disease diagnosis across ten languages and 4917 cases
erreBioMedicine
IF10.8
err2025-10-14
err0
errOAAI
errLeonardo Chimirri; J. Harry Caufield; Yasemin Bridges; Nicolas Matentzoglu; Michael Gargano; Mario Cazalla; Shihan Chen; Daniel Danis; Alexander J.M. Dingemans; Klara Gehle; Petra Gehle; Adam S.L. Graefe; Weihong Gu; Markus S. Ladewig; Pablo Lapunzina; Julián Nevado; Enock Niyonkuru; Soichi Ogishima; Dominik Seelow; Jair A. Tenorio Castaño; Marek Turnovec; Bert B.A. de Vries; Kai Wang; Kyran Wissink; Zafer Yüksel; Gabriele Zucca; Melissa A. Haendel; Christopher J. Mungall; Justin Reese; Peter N. Robinson
errShare
errSave
monarchr: an R package for querying biomedical knowledge graphs
errBIOINFORMATICS
IF5.4
err2025-10-01
err0
errOAAI
errO'Neil, Shawn T.; Schilder, Brian M.; Schaper, Kevin; Cox, Corey; Korn, Daniel; Gehrke, Sarah; Mungall, Christopher J.; Haendel, Melissa A.
errShare
errSave
Effect of Paxlovid treatment during acute COVID-19 on Long COVID onset: An EHR-based target trial emulation from the N3C and RECOVER consortia
errPLOS MEDICINE
IF9.9
err2025-09-10
err2
errOAAI
errPreiss, Alexander; Bhatia, Abhishek; Aragon, Leyna V.; Baratta, John M.; Baskaran, Monika; Blancero, Frank; Brannock, M. Daniel; Chew, Robert F.; Diaz, Ivan; Fitzgerald, Megan; Kelly, Elizabeth P.; Zhou, Andrea G.; Carton, Thomas W.; Chute, Christopher G.; Haendel, Melissa; Moffitt, Richard; Pfaff, Emily
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errSave
Re-engineering a machine learning phenotype to adapt to the changing COVID-19 landscape: a machine learning modelling study from the N3C and RECOVER consortia
errlancet digital health
IF0
err2025-08-25
err0
errOAAI
errMiles Crosskey; Tomas McIntee; Sandy Preiss; Daniel Brannock; John M Baratta; Yun Jae Yoo; Emily Hadley; Frank Blanceró; Robert Chew; Johanna Loomba; Abhishek Bhatia; Christopher G Chute; Melissa Haendel; Richard Moffitt; Emily R Pfaff
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errSave
Integrating Knowledge: The Power of Ontologies in Psychiatric Research and Clinical Informatics
errBiological Psychiatry
IF9
err2025-05-23
err0
PREAI
errMelvin G. McInnis; Ben Coleman; Eric Hurwitz; Peter N. Robinson; Andrew E. Williams; Melissa A. Haendel; Julie A. McMurry
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errSave
The Unified Phenotype Ontology : a framework for cross-species integrative phenomics
errGENETICS
IF5.1
err2025-03-17
err0
errOAAI
errMatentzoglu, Nicolas; Bello, Susan M.; Stefancsik, Ray; Alghamdi, Sarah M.; Anagnostopoulos, Anna, V; Balhoff, James P.; Balk, Meghan A.; Bradford, Yvonne M.; Bridges, Yasemin; Callahan, Tiffany J.; Caufield, Harry; Cuzick, Alayne; Carmody, Leigh C.; Caron, Anita R.; de Souza, Vinicius; Engel, Stacia R.; Fey, Petra; Fisher, Malcolm; Gehrke, Sarah; Grove, Christian; Hansen, Peter; Harris, Nomi L.; Harris, Midori A.; Harris, Laura; Ibrahim, Arwa; Jacobsen, Julius O. B.; Koehler, Sebastian; Mcmurry, Julie A.; Munoz-Fuentes, Violeta; Munoz-Torres, Monica C.; Parkinson, Helen; Pendlington, Zoe M.; Pilgrim, Clare; Robb, Sofia M. C.; Robinson, Peter N.; Seager, James; Segerdell, Erik; Smedley, Damian; Sollis, Elliot; Toro, Sabrina; Vasilevsky, Nicole; Wood, Valerie; Haendel, Melissa A.; Mungall, Christopher J.; Mclaughlin, James A.; Osumi-Sutherland, David
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errSave
Long COVID Incidence Proportion in Adults and Children Between 2020 and 2024: An EHR-Based Study From the RECOVER Initiative
errCLINICAL INFECTIOUS DISEASES
IF7.3
err2025-02-05
err1
PREAI
errMandel, Hannah; Yoo, Yun J.; Allen, Andrea J.; Abedian, Sajjad; Verzani, Zoe; Karlson, Elizabeth W.; Kleinman, Lawrence C.; Mudumbi, Praveen C.; Oliveira, Carlos R.; Muszynski, Jennifer A.; Gross, Rachel S.; Carton, Thomas W.; Kim, C.; Taylor, Emily; Park, Heekyong; Divers, Jasmin; Kelly, J. Daniel; Arnold, Jonathan; Geary, Carol Reynolds; Zang, Chengxi; Tantisira, Kelan G.; Rhee, Kyung E.; Koropsak, Michael; Mohandas, Sindhu; Vasey, Andrew; Mosa, Abu Saleh Mohammad; Haendel, Melissa; Chute, Christopher G.; Murphy, Shawn N.; O'Brien, Lisa; Szmuszkovicz, Jacqueline; Guthe, Nicholas; Santana, Jorge L.; De, Aliva; Bogie, Amanda L.; Halabi, Katia C.; Mohanraj, Lathika; Kinser, Patricia A.; Packard, Samuel E.; Tuttle, Katherine R.; Hirabayashi, Kathryn; Kaushal, Rainu; Pfaff, Emily; Weiner, Mark G.; Thorpe, Lorna E.; Moffitt, Richard A.; RECOVER EHR Cohort
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errSave
A corpus of GA4GH phenopackets: Case-level phenotyping for genomic diagnostics and discovery
errHUMAN GENETICS AND GENOMICS ADVANCES
IF3.6
err2025-01-01
err4
errOAAI
errDanis, Daniel; Bamshad, Michael J.; Bridges, Yasemin; Caballero-Oteyza, Andres; Cacheiro, Pilar; Carmody, Leigh C.; Chimirri, Leonardo; Chong, Jessica X.; Coleman, Ben; Dalgleish, Raymond; Freeman, Peter J.; Graefe, Adam S. L.; Groza, Tudor; Hansen, Peter; Jacobsen, Julius O. B.; Klocperk, Adam; Kusters, Maaike; Ladewig, Markus S.; Marcello, Allison J.; Mattina, Teresa; Mungall, Christopher J.; Munoz-Torres, Monica C.; Reese, Justin T.; Rehburg, Filip; Reis, Barbara C. S.; Schuetz, Catharina; Smedley, Damian; Strauss, Timmy; Sundaramurthi, Jagadish Chandrabose; Thun, Sylvia; Wissink, Kyran; Wagstaff, John F.; Zocche, David; Haendel, Melissa A.; Robinson, Peter N.
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errSave
Finding Long-COVID: temporal topic modeling of electronic health records from the N3C and RECOVER programs
errNPJ DIGITAL MEDICINE
IF15.1
err2024-10-21
err0
errOAAI
errO'Neil, Shawn T.; Madlock-Brown, Charisse; Wilkins, Kenneth J.; McGrath, Brenda M.; Davis, Hannah E.; Assaf, Gina S.; Wei, Hannah; Zareie, Parya; French, Evan T.; Loomba, Johanna; McMurry, Julie A.; Zhou, Andrea; Chute, Christopher G.; Moffitt, Richard A.; Pfaff, Emily R.; Yoo, Yun Jae; Leese, Peter; Chew, Robert F.; Lieberman, Michael; Haendel, Melissa A.
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errSave
A Case Demonstration of the Open Health Natural LanguageProcessing Toolkit From the National COVID-19 CohortCollaborative and the Researching COVID to Enhance RecoveryPrograms for a Natural Language Processing System forCOVID-19 or Postacute Sequelae of SARS CoV-2 Infection:Algorithm Development and Validation
errJMIR MEDICAL INFORMATICS
IF3.8
err2024-09-09
err0
errOAAI
errWen, Andrew; Wang, Liwei; He, Huan; Fu, Sunyang; Liu, Sijia; Hanauer, David A.; Harris, Daniel R.; Kavuluru, Ramakanth; Zhang, Rui; Natarajan, Karthik; Pavinkurve, Nishanthp; Hajagos, Janos; Rajuper, Sritha; Lingam, Veena; Saltz, Mary; Elowsky, Corey; Moffitt, Richard A.; Koraishy, Farrukh M.; Palchuk, Matvey B.; Donovan, Jordan; Lingrey, Lora; Stone-DerHagopian, Garo; Miller, Robert T.; Williams, Andrew E.; Leese, Peter J.; Kovach, Paul, I; Pfaff, Emily R.; Zemme, Mikhail; Pates, Robert D.; Guthe, Nick; Haendel, Melissa A.; Chute, Christopher G.; Liu, Hongfang
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Implementation of a dyadic nomenclature for monogenic diseases
errAMERICAN JOURNAL OF HUMAN GENETICS
IF8.1
err2024-09-01
err1
PREAI
errThaxton, Courtney; Biesecker, Leslie G.; DiStefano, Marina; Haendel, Melissa; Hamosh, Ada; Owens, Emma; Plon, Sharon E.; Rehm, Heidi L.; Berg, Jonathan S.
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
M
M Snyder
H-index: 210 · Papers: 3.3K
S
Steven J.M. Jones
H-index: 189 · Papers: 1.3K
S
Susan Redline
H-index: 168 · Papers: 1.7K
M
Michael Berk
H-index: 155 · Papers: 2.2K
J
Jasvinder A. Singh
H-index: 145 · Papers: 1.1K
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