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Leonid A. Mirny

massachusetts institute of technology

86H-index
370Paper Count
4.8WCitation Count
Published Papers 93
Publication Date
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Genome-wide absolute quantification of chromatin looping
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2026-06-30
err0
PREAI
errJames M. Jusuf; Jin H. Yang; Jack Toppen; Simon Grosse-Holz; Michele Gabriele; Pia Mach; Ilya M. Flyamer; Christoph Zechner; Luca Giorgetti; Leonid A. Mirny; Anders S. Hansen
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errSave
PDS5 proteins control genome architecture by limiting the lifetime of cohesin-NIPBL complexes
errMolecular Cell
IF16.6
err2026-04-23
err0
errOAAI
errGordana Wutz; Iain F. Davidson; Edward J. Banigan; Roman R. Stocsits; Ryotaro Kawasumi; Wen Tang; Kota Nagasaka; Lorenzo Costantino; Ralf Jansen; Kouji Hirota; Dana Branzei; Leonid A. Mirny; Jan-Michael Peters
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errSave
Condensin accelerates long-range intra-chromosomal interactions
errNature Communications
IF15.7
err2026-03-16
err0
errOAAI
errFan Zou; Yi Li; Timothy Földes; Henrik Dahl Pinholt; Courtney Smith; Leonid Mirny; Lu Bai
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errSave
Extrusion fountains are hallmarks of chromosome organization emerging upon zygotic genome activation
errNature Communications
IF15.7
err2026-02-14
err0
errOAAI
errAleksandra Galitsyna; Sergey V. Ulianov; Mariia Bazarevich; Nikolai S. Bykov; Marina Veil; Meijiang Gao; Kristina Perevoschikova; Mikhail S. Gelfand; Sergey V. Razin; Leonid Mirny; Daria Onichtchouk
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errSave
Cohesin-mediated chromatin organization controls the differentiation and function of dendritic cells
errScience Immunology
IF16.3
err2026-02-06
err0
PREAI
errNicholas M. Adams; Aleksandra Galitsyna; Ioanna Tiniakou; Eduardo Esteva; Ai C. Ra; Daniel Martinez-Krams; Colleen M. Lau; Jojo Reyes; Nezar Abdennur; Alexey Shkolikov; George S. Yap; Alireza Khodadadi-Jamayran; Igor Dolgalev; Leonid A. Mirny; Boris Reizis
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errSave
Scale-free models of chromosome structure, dynamics, and mechanics
errPNAS NEXUS
IF3.8
err2025-12-01
err0
errOAAI
errGrosse-Holz, Simon; Mirny, Leonid A.; Coulon, Antoine
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errSave
HIRA defines early replication initiation zones independently of their genome compartment
errNature Communications
IF15.7
err2025-11-06
err0
errOAAI
errTina Karagyozova; Alberto Gatto; Audrey Forest; Jean-Pierre Quivy; Rocío Nunez-Vazquez; Marc A. Martí-Renom; Leonid A. Mirny; Geneviève Almouzni
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errSave
Dynamics of microcompartment formation at the mitosis-to-G1 transition
errNature Structural & Molecular Biology
IF10.1
err2025-10-17
err0
errOAAI
errViraat Y. Goel; Nicholas G. Aboreden; James M. Jusuf; Haoyue Zhang; Luisa P. Mori; Leonid A. Mirny; Gerd A. Blobel; Edward J. Banigan; Anders S. Hansen
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errSave
Chromatin as a three-dimensional memory machine
errCurrent Opinion in Structural Biology
IF7
err2025-10-04
err0
PREAI
errJeremy A. Owen; Leonid A. Mirny
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errSave
Spandrels of the cell nucleus
errCURRENT OPINION IN CELL BIOLOGY
IF4.3
err2024-10-01
err2
errOAAI
errSolovei, Irina; Mirny, Leonid
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errSave
Mitotic chromosomes are self-entangled and disentangle through a topoisomerase-II-dependent two-stage exit from mitosis
errMOLECULAR CELL
IF16.6
err2024-04-01
err6
errOAAI
errHildebrand, Erica M.; Polovnikov, Kirill; Dekker, Bastiaan; Liu, Yu; Lafontaine, Denis L.; Fox, A. Nicole; Li, Ying; Venev, Sergey V.; Mirny, Leonid A.; Dekker, Job
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Tunable DNMT1 degradation reveals DNMT1/DNMT3B synergy in DNA methylation and genome organization
errJOURNAL OF CELL BIOLOGY
IF6.4
err2024-02-20
err2
errOAAI
errScelfo, Andrea; Barra, Viviana; Abdennur, Nezar; Spracklin, George; Busato, Florence; Salinas-Luypaert, Catalina; Bonaiti, Elena; Velasco, Guillaume; Bonhomme, Frederic; Chipont, Anna; Tijhuis, Andrea E.; Spierings, Diana C. J.; Guerin, Coralie; Arimondo, Paola; Francastel, Claire; Foijer, Floris; Tost, Jorg; Mirny, Leonid; Fachinetti, Daniele
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In vivo tracking of functionally tagged Rad51 unveils a robust strategy of homology search (vol 30, 2020, 2023)
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2023-11-22
err1
errOAAI
errLiu, Siyu; Mine-Hattab, Judith; Villemeur, Marie; Guerois, Raphael; Pinholt, Henrik Dahl; Mirny, Leonid A.; Taddei, Angela
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errSave
Crumpled Polymer with Loops Recapitulates Key Features of Chromosome Organization
errPHYSICAL REVIEW X
IF15.7
err2023-11-13
err13
errOAAI
errPolovnikov, Kirill E.; Brandao, Hugo B.; Belan, Sergey; Slavov, Bogdan; Imakaev, Maxim; Mirny, Leonid A.
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errSave
In vivo tracking of functionally tagged Rad51 unveils a robust strategy of homology search (vol 30, pg 1582, 2023)
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2023-09-07
err1
errOAAI
errLiu, Siyu; Mine-Hattab, Judith; Villemeur, Marie; Guerois, Raphael; Pinholt, Henrik Dahl; Mirny, Leonid A.; Taddei, Angela
errShare
errSave
In vivo tracking of functionally tagged Rad51 unveils a robust strategy of homology search
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2023-08-21
err8
errOAAI
errLiu, Siyu; Mine-Hattab, Judith; Villemeur, Marie; Guerois, Raphael; Pinholt, Henrik Dahl; Mirny, Leonid A.; Taddei, Angela
errShare
errSave
Chromosome and protein folding: In search for unified principles
errCURRENT OPINION IN STRUCTURAL BIOLOGY
IF7
err2023-08-01
err5
errOAAI
errMirny, Leonid A.
errShare
errSave
Transcription shapes 3D chromatin organization by interacting with loop extrusion
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-03-10
err59
errOAAI
errBanigan, Edward J.; Tang, Wen; van den Berg, Aafke A.; Stocsits, Roman R.; Wutz, Gordana; Brandao, Hugo B.; Busslinger, Georg A.; Peters, Jan-Michael; Mirny, Leonid A.
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errSave
Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers
errNATURE STRUCTURAL & MOLECULAR BIOLOGY
IF10.1
err2022-12-22
err26
errOAAI
errSpracklin, George; Abdennur, Nezar; Imakaev, Maxim; Chowdhury, Neil; Pradhan, Sriharsa; Mirny, Leonid A. A.; Dekker, Job
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errSave
The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data (vol 13, 2365, 2022)
errNATURE COMMUNICATIONS
IF15.7
err2022-11-02
err3
errOAAI
errReiff, Sarah B.; Schroeder, Andrew J.; Kirli, Koray; Cosolo, Andrea; Bakker, Clara; Mercado, Luisa; Lee, Soohyun; Veit, Alexander D.; Balashov, Alexander K.; Vitzthum, Carl; Ronchetti, William; Pitman, Kent M.; Johnson, Jeremy; Ehmsen, Shannon R.; Kerpedjiev, Peter; Abdennur, Nezar; Imakaev, Maxim; Ozturk, Serkan Utku; Camoglu, Ugur; Mirny, Leonid A.; Gehlenborg, Nils; Alver, Burak H.; Park, Peter J.
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Research Directions

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