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J

Joe W. Gray

Oregon Health & Science University

130H-index
1.2KPaper Count
10.0WCitation Count
Published Papers 257
Publication Date
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Radiation effects research foundation-a view to the future
errCARCINOGENESIS
IF2.9
err2025-09-01
err1
errOAAI
errGray, Joe W.; Feinberg, Andrew P.
errShare
errSave
Human interpretable grammar encodes multicellular systems biology models to democratize virtual cell laboratories
errCell
IF42.5
err2025-07-26
err0
errOAAI
errJeanette A.I. Johnson; Daniel R. Bergman; Heber L. Rocha; David L. Zhou; Eric Cramer; Ian C. Mclean; Yoseph W. Dance; Max Booth; Zachary Nicholas; Tamara Lopez-Vidal; Atul Deshpande; Randy Heiland; Elmar Bucher; Fatemeh Shojaeian; Matthew Dunworth; André Forjaz; Michael Getz; Inês Godet; Furkan Kurtoglu; Melissa Lyman; John Metzcar; Jacob T. Mitchell; Andrew Raddatz; Jacobo Solorzano; Aneequa Sundus; Yafei Wang; David G. DeNardo; Andrew J. Ewald; Daniele M. Gilkes; Luciane T. Kagohara; Ashley L. Kiemen; Elizabeth D. Thompson; Denis Wirtz; Laura D. Wood; Pei-Hsun Wu; Neeha Zaidi; Lei Zheng; Jacquelyn W. Zimmerman; Jude M. Phillip; Elizabeth M. Jaffee; Joe W. Gray; Lisa M. Coussens; Young Hwan Chang; Laura M. Heiser; Genevieve L. Stein-O’Brien; Elana J. Fertig; Paul Macklin
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errSave
Functional delineation of the luminal epithelial microenvironment in breast using cell-based screening in combinatorial microenvironments
errCELLULAR SIGNALLING
IF3.7
err2024-01-01
err0
errOAAI
errJokela, Tiina A.; Dane, Mark A.; Smith, Rebecca L.; Devlin, Kaylyn L.; Shalabi, Sundus; Lopez, Jennifer C.; Miyano, Masaru; Stampfer, Martha R.; Korkola, James E.; Gray, Joe W.; Heiser, Laura M.; Labarge, Mark A.
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errSave
MYC Deregulation and PTEN Loss Model Tumor and Stromal Heterogeneity of Aggressive Triple-Negative Breast Cancer
errNATURE COMMUNICATIONS
IF15.7
err2023-09-13
err4
errOAAI
errDoha, Zinab O.; Wang, Xiaoyan; Calistri, Nicholas L.; Eng, Jennifer; Daniel, Colin J.; Ternes, Luke; Kim, Eun Na; Pelz, Carl; Munks, Michael; Betts, Courtney; Kwon, Sunjong; Bucher, Elmar; Li, Xi; Waugh, Trent; Tatarova, Zuzana; Blumberg, Dylan; Ko, Aaron; Kirchberger, Nell; Pietenpol, Jennifer A.; Sanders, Melinda E.; Langer, Ellen M.; Dai, Mu-Shui; Mills, Gordon; Chin, Koei; Chang, Young Hwan; Coussens, Lisa M.; Gray, Joe W.; Heiser, Laura M.; Sears, Rosalie C.
errShare
errSave
3D multiplexed tissue imaging reconstruction and optimized region-of-interest (ROI) selection through deep learning model of channels embedding
errCANCER RESEARCH
IF16.6
err2023-04-04
err0
PREAI
errBurlingame, Erik; Ternes, Luke; Kim, Eun Na; Gray, Joe W.; Chang, Young Hwan
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errSave
Triggering anti-tumor immune response with a nanotherapeutic that targets TLR9 and STAT3 pathways
errCANCER RESEARCH
IF16.6
err2023-04-04
err1
PREAI
errNgamcherdtrakul, Worapol; Reda, Moataz; Baker, Cole; Crumrine, Noah; Wang, Ruijie; Wallstrum, Alyssa; White, Natalie; Saito, Jeremy; Zaidan, Husam; Rehwaldt, Justin; Nelson, Molly; Gray, Joe; Yantasee, Wassana
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errSave
Robust spatial biomarker discovery through multi-platform multiplex image analysis of breast cancer clinical cohorts
errCANCER RESEARCH
IF16.6
err2023-04-04
err0
PREAI
errEng, Jennifer R.; Bucher, Elmar; Hu, Zhi; Sanders, Melinda; Chakravarthy, Bapsi; Pietenpol, Jennifer; Sears, Rosalie C.; Gibbs, Summer; Gray, Joe W.; Chin, Koei
errShare
errSave
Spatial analysis of local drug induced changes in tumor microenvironment predicts effective treatment combinations in breast cancer
errCANCER RESEARCH
IF16.6
err2023-04-04
err0
PREAI
errTatarova, Zuzana; Blumberg, Dylan C.; Mills, Gordon B.; Coussens, Lisa M.; Jonas, Oliver; Gray, Joe W.
errShare
errSave
Longitudinal, multimodal profiling of metastatic ER plus breast cancer on CDK4/6 inhibitor therapy
errCANCER RESEARCH
IF16.6
err2023-04-04
err0
PREAI
errCreason, Allison L.; Egger, Julian; Watson, Cameron; Sivagnanam, Shamilene; Lin, Jia-Ren; Chin, Koei; Sorger, Peter K.; Coussens, Lisa M.; Mitri, Zahi I.; Gray, Joe W.; Mills, Gordon B.; Goecks, Jeremy
errShare
errSave
Selective inactivation of p53 facilitates mouse epithelial tumor progression without chromosomal instability
errMOLECULAR AND CELLULAR BIOLOGY
IF2.7
err2023-03-27
err55
errOAAI
errLu, XD; Magrane, G; Yin, CY; Louis, DN; Gray, J; Van Dyke, T
errShare
errSave
Adaptive Multi-Drug Treatment of Evolving Cancers (AMTEC): A Phase II, Open-Label, Study of Olaparib in Combination with either Durvalumab, Selumetinib or Capivasertib, or Ceralasertib Monotherapy in Patients with Metastatic TNBC
errCANCER RESEARCH
IF16.6
err2023-03-01
err0
PREAI
errHobbs, Evthokia; Mills, Gordon; Lim, Jeong; Klinger, Marlana; Siex, Kiara; Huszti, Sidney; Yang, Annie; Galipeau, Danielle; Zheng, Christina; Murray, Lauren; Goodford, Becky; Marter-Sanders, Nicholas; Olson, Anastasiya; Stommel, Jayne; Johnson, Brett; Keck, Jamie; Kong, Ben; Solanki, Allison; Goodyear, Shaun; Corless, Christopher; Gray, Joe; Zahi, Mitri
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errSave
A multi-omic analysis of MCF10A cells provides a resource for integrative assessment of ligand-mediated molecular and phenotypic responses
errCOMMUNICATIONS BIOLOGY
IF5.1
err2022-10-07
err14
errOAAI
errGross, Sean M.; Dane, Mark A.; Smith, Rebecca L.; Devlin, Kaylyn L.; McLean, Ian C.; Derrick, Daniel S.; Mills, Caitlin E.; Subramanian, Kartik; London, Alexandra B.; Torre, Denis; Evangelista, John Erol; Clarke, Daniel J. B.; Xie, Zhuorui; Erdem, Cemal; Lyons, Nicholas; Natoli, Ted; Pessa, Sarah; Lu, Xiaodong; Mullahoo, James; Li, Jonathan; Adam, Miriam; Wassie, Brook; Liu, Moqing; Kilburn, David F.; Liby, Tiera A.; Bucher, Elmar; Sanchez-Aguila, Crystal; Daily, Kenneth; Omberg, Larsson; Wang, Yunguan; Jacobson, Connor; Yapp, Clarence; Chung, Mirra; Vidovic, Dusica; Lu, Yiling; Schurer, Stephan; Lee, Albert; Pillai, Ajay; Subramanian, Aravind; Papanastasiou, Malvina; Fraenkel, Ernest; Feiler, Heidi S.; Mills, Gordon B.; Jaffe, Jake D.; Ma'ayan, Avi; Birtwistle, Marc R.; Sorger, Peter K.; Korkola, James E.; Gray, Joe W.; Heiser, Laura M.
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errSave
Urinary Comprehensive Genomic Profiling Correlates Urothelial Carcinoma Mutations with Clinical Risk and Efficacy of Intervention
errJOURNAL OF CLINICAL MEDICINE
IF2.9
err2022-09-30
err8
errOAAI
errBicocca, Vincent T.; Phillips, Kevin G.; Fischer, Daniel S.; Caruso, Vincent M.; Goudarzi, Mahdi; Garcia-Ransom, Monica; Lentz, Peter S.; MacBride, Andrew R.; Jensen, Brad W.; Mazzarella, Brian C.; Koppie, Theresa; Korkola, James E.; Gray, Joe W.; Levin, Trevor G.
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errSave
Discovery, isolation, heterologous expression and mode-of-action studies of the antibiotic polyketide tatiomicin from Amycolatopsis sp. DEM30355
errSCIENTIFIC REPORTS
IF3.9
err2022-09-16
err4
errOAAI
errKepplinger, Bernhard; Mardiana, Lina; Cowell, Joseph; Morton-Laing, Stephanie; Dashti, Yousef; Wills, Corinne; Marrs, Emma C. L.; Perry, John D.; Gray, Joe; Goodfellow, Michael; Errington, Jeff; Probert, Michael R.; Clegg, William; Bogaerts, Jonathan; Herrebout, Wouter; Allenby, Nick E. E.; Hall, Michael J.
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errSave
Development of a nanoparticle-based immunotherapy targeting PD-L1 and PLK1 for lung cancer treatment
errNATURE COMMUNICATIONS
IF15.7
err2022-07-23
err89
errOAAI
errReda, Moataz; Ngamcherdtrakul, Worapol; Nelson, Molly A.; Siriwon, Natnaree; Wang, Ruijie; Zaidan, Husam Y.; Bejan, Daniel S.; Reda, Sherif; Ngoc Ha Hoang; Crumrine, Noah A.; Rehwaldt, Justin P. C.; Bindal, Akash; Mills, Gordon B.; Gray, Joe W.; Yantasee, Wassana
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errSave
A multiplex implantable microdevice assay identifies synergistic combinations of cancer immunotherapies and conventional drugs
errNATURE BIOTECHNOLOGY
IF41.7
err2022-07-04
err23
errOAAI
errTatarova, Zuzana; Blumberg, Dylan C.; Korkola, James E.; Heiser, Laura M.; Muschler, John L.; Schedin, Pepper J.; Ahn, Sebastian W.; Mills, Gordon B.; Coussens, Lisa M.; Jonas, Oliver; Gray, Joe W.
errShare
errSave
A framework for multiplex imaging optimization and reproducible analysis
errCOMMUNICATIONS BIOLOGY
IF5.1
err2022-05-11
err27
errOAAI
errEng, Jennifer; Bucher, Elmar; Hu, Zhi; Zheng, Ting; Gibbs, Summer L.; Chin, Koei; Gray, Joe W.
errShare
errSave
A multi-encoder variational autoencoder controls multiple transformational features in single-cell image analysis
errCOMMUNICATIONS BIOLOGY
IF5.1
err2022-03-23
err28
errOAAI
errTernes, Luke; Dane, Mark; Gross, Sean; Labrie, Marilyne; Mills, Gordon; Gray, Joe; Heiser, Laura; Chang, Young Hwan
errShare
errSave
Multiplex spatial systems analysis of responses to spatially separate nanoliter doses of drug predicts systemic immune-modulating combination treatments in breast cancer
errCANCER RESEARCH
IF16.6
err2022-02-15
err0
PREAI
errTatarova, Zuzana; Blumberg, Dylan C.; Coussens, Lisa M.; Mills, Gordon B.; Jonas, Oliver; Gray, Joe W.
errShare
errSave
An omic and multidimensional spatial atlas from serial biopsies of an evolving metastatic breast cancer
errCELL REPORTS MEDICINE
IF10.6
err2022-02-01
err18
errOAAI
errJohnson, Brett E.; Creason, Allison L.; Stommel, Jayne M.; Keck, Jamie M.; Parmar, Swapnil; Betts, Courtney B.; Blucher, Aurora; Boniface, Christopher; Bucher, Elmar; Burlingame, Erik; Camp, Todd; Chin, Koei; Eng, Jennifer; Estabrook, Joseph; Feiler, Heidi S.; Heskett, Michael B.; Hu, Zhi; Kolodzie, Annette; Kong, Ben L.; Labrie, Marilyne; Lee, Jinho; Leyshock, Patrick; Mitri, Souraya; Patterson, Janice; Riesterer, Jessica L.; Sivagnanam, Shamilene; Somers, Julia; Sudar, Damir; Thibault, Guillaume; Weeder, Benjamin R.; Zheng, Christina; Nan, Xiaolin; Thompson, Reid F.; Heiser, Laura M.; Spellman, Paul T.; Thomas, George; Demir, Emek; Chang, Young Hwan; Coussens, Lisa M.; Guimaraes, Alexander R.; Corless, Christopher; Goecks, Jeremy; Bergan, Raymond; Mitri, Zahi; Mills, Gordon B.; Gray, Joe W.
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errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
G
Gad Getz
H-index: 248 · Papers: 1.8K
G
Gordon B. Mills
H-index: 231 · Papers: 3.5K
R
Robert A. Weinberg
H-index: 194 · Papers: 673
G
Gabriel N. Hortobágyi
H-index: 187 · Papers: 1.9K
F
Francis S. Collins
H-index: 182 · Papers: 838
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