John E. Johnson - Publications, H-index & Citations | Canyam

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John E. Johnson

Scripps Research Institute

81H-index

463Paper Count

2.4WCitation Count

Published Papers 120

Publication Date

ViReMa: a virus recombination mapper of next-generation sequencing data characterizes diverse recombinant viral nucleic acids

IF3.9

2023-03-20

5

OAAI

Sotcheff, Stephanea; Zhou, Yiyang; Yeung, Jason; Sun, Yan; Johnson, John E.; Torbett, Bruce E.; Routh, Andrew L.

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Plant-expressed virus-like particles reveal the intricate maturation process of a eukaryotic virus

COMMUNICATIONS BIOLOGY

IF5.1

2021-05-24

3

OAAI

Castells-Graells, Roger; Ribeiro, Jonas R. S.; Domitrovic, Tatiana; Hesketh, Emma L.; Scarff, Charlotte A.; Johnson, John E.; Ranson, Neil A.; Lawson, David M.; Lomonossoff, George P.

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Icosahedral virus structures and the protein data bank

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2021-01-01

19

OAAI

Johnson, John E.; Olson, Arthur J.

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VIPERdb v3.0: a structure-based data analytics platform for viral capsids

NUCLEIC ACIDS RESEARCH

IF13.1

2020-12-11

41

OAAI

Montiel-Garcia, Daniel; Santoyo-Rivera, Nelly; Phuong Ho; Carrillo-Tripp, Mauricio; Brooks, Charles L., III; Johnson, John E.; Reddy, Vijay S.

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Allosteric effects in bacteriophage HK97 procapsids revealed directly from covariance analysis of cryo EM data

JOURNAL OF STRUCTURAL BIOLOGY

IF5.1

2018-05-01

7

PREAI

Xu, Nan; Veesler, David; Doerschuk, Peter C.; Johnson, John E.

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Cryo-EM Elucidation of the Structure of Bacteriophage P22 Virions after Genome Release

BIOPHYSICAL JOURNAL

IF3.1

2018-03-01

18

OAAI

McNulty, Reginald; Cardone, Giovanni; Gilcrease, Eddie B.; Baker, Timothy S.; Casjens, Sherwood R.; Johnson, John E.

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Isolation and Characterization of Metallosphaera Turreted Icosahedral Virus, a Founding Member of a New Family of Archaeal Viruses

JOURNAL OF VIROLOGY

IF3.8

2017-10-15

21

OAAI

Wagner, Cassia; Reddy, Vijay; Asturias, Francisco; Khoshouei, Maryam; Johnson, John E.; Manrique, Pilar; Munson-McGee, Jacob; Baumeister, Wolfgang; Lawrence, C. Martin; Young, Mark J.

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Intracellular Delivery of Luminescent Quantum Dots Mediated by a Virus-Derived Lytic Peptide

BIOCONJUGATE CHEMISTRY

IF3.9

2016-12-21

16

PREAI

Safi, Malak; Domitrovic, Tatiana; Kapur, Anshika; Zhan, Naiqian; Aldeek, Fadi; Johnson, John E.; Mattoussi, Hedi

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Virus particle dynamics derived from CryoEM studies

CURRENT OPINION IN VIROLOGY

IF5.1

2016-06-01

10

OAAI

Doerschuk, Peter C.; Gong, Yunye; Xu, Nan; Domitrovic, Tatiana; Johnson, John E.

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A virus-based nanoplasmonic structure as a surface-enhanced Raman biosensor (vol 77, pg 306, 2016)

BIOSENSORS & BIOELECTRONICS

IF10.5

2016-05-01

0

PREAI

Lebedev, Nikolai; Griva, Igor; Dressick, Walter J.; Phelps, Jamie; Johnson, John E.; Meshcheriakova, Yulia; Lomonossoff, George P.; Soto, Carissa M.

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Effect of the viral protease on the dynamics of bacteriophage HK97 maturation intermediates characterized by variance analysis of cryo EM particle ensembles

JOURNAL OF STRUCTURAL BIOLOGY

IF5.1

2016-03-01

10

OAAI

Gong, Yunye; Veesler, David; Doerschuk, Peter C.; Johnson, John E.

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A virus-based nanoplasmonic structure as a surface-enhanced Raman biosensor

BIOSENSORS & BIOELECTRONICS

IF10.5

2016-03-01

30

OAAI

Lebedev, Nikolai; Griva, Igor; Dressick, Walter J.; Phelps, Jamie; Johnson, John E.; Meshcheriakova, Yulia; Lomonossoff, George P.; Soto, Carissa M.

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CoVaMa: Co-Variation Mapper for disequilibrium analysis of mutant loci in viral populations using next-generation sequence data

IF4.3

2015-12-01

16

OAAI

Routh, Andrew; Chang, Max W.; Okulicz, Jason F.; Johnson, John E.; Torbett, Bruce E.

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Near-atomic resolution reconstructions using a mid-range electron microscope operated at 200 kV

JOURNAL OF STRUCTURAL BIOLOGY

IF5.1

2014-11-01

14

OAAI

Campbell, Melody G.; Kearney, Bradley M.; Cheng, Anchi; Potter, Clinton S.; Johnson, John E.; Carragher, Bridget; Veesler, David

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Assembly and Maturation of a T=4 Quasi-Equivalent Virus Is Guided by Electrostatic and Mechanical Forces

IF3.5

2014-08-22

7

OAAI

Kearney, Bradley M.; Johnson, John E.

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Single-particle EM reveals plasticity of interactions between the adenovirus penton base and integrin αVβ3

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2014-06-02

35

OAAI

Veesler, David; Cupelli, Karolina; Burger, Markus; Graeber, Peter; Stehle, Thilo; Johnson, John E.

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Virus-Templated Plasmonic Nanoclusters with Icosahedral Symmetry via Directed Self-Assembly

IF12.1

2014-04-15

36

OAAI

Fontana, Jake; Dressick, Walter J.; Phelps, Jamie; Johnson, John E.; Rendell, Ronald W.; Sampson, Travian; Ratna, Banahalli R.; Soto, Carissa M.

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Analysis of Viral Capsid HK97 via Cryodetection MALDI TOF in the MegaDalton Mass Range

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

IF16.9

2014-03-14

0

OAAI

Snijder, J.; Rose, R. J.; Veesler, D.; Johnson, J. E.; Heck, A. J. R.

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Maximizing the potential of electron cryomicroscopy data collected using direct detectors

JOURNAL OF STRUCTURAL BIOLOGY

IF5.1

2013-11-01

33

OAAI

Veesler, David; Campbell, Melody G.; Cheng, Anchi; Fu, Chi-yu; Murez, Zachary; Johnson, John E.; Potter, Clinton S.; Carragher, Bridget

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Discovery of functional genomic motifs in viruses with ViReMa-a Virus Recombination Mapper-for analysis of next-generation sequencing data

NUCLEIC ACIDS RESEARCH

IF13.1

2013-10-09

66

OAAI

Routh, Andrew; Johnson, John E.

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