Not logged in APOBEC3A is the predominant global editor of cytosines in human mRNAs and in single-strand RNA viruses Kockler, Zachary W.; Bostan, Hamed; Klimczak, Leszek J.; Hsiao, Yun-Chung; Dennen, Matthew S.; Cook, Molly E.; Mertz, Tony M.; Perelygina, Ludmila; Kazanov, Marat D.; Li, Jian-Liang; Roberts, Steven A.; Gordenin, Dmitry A. Share Save
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APOBEC affects tumor evolution and age at onset of lung cancer in smokers Zhang, Tongwu; Sang, Jian; Hoang, Phuc H.; Zhao, Wei; Rosenbaum, Jennifer; Johnson, Kofi Ennu; Klimczak, Leszek J.; McElderry, John; Klein, Alyssa; Wirth, Christopher; Bergstrom, Erik N.; Diaz-Gay, Marcos; Vangara, Raviteja; Colon-Matos, Frank; Hutchinson, Amy; Lawrence, Scott M.; Cole, Nathan; Zhu, Bin; Przytycka, Teresa M.; Shi, Jianxin; Caporaso, Neil E.; Homer, Robert; Pesatori, Angela C.; Consonni, Dario; Imielinski, Marcin; Chanock, Stephen J.; Wedge, David C.; Gordenin, Dmitry A.; Alexandrov, Ludmil B.; Harris, Reuben S.; Landi, Maria Teresa Share Save
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Changes in metabolic landscapes shape divergent but distinct mutational signatures and cytotoxic consequences of redox stress Degtyareva, Natalya P.; Placentra, Victoria C.; Gabel, Scott A.; Klimczak, Leszek J.; Gordenin, Dmitry A.; Wagner, Brett A.; Buettner, Garry R.; Mueller, Geoffrey A.; Smirnova, Tatyana, I; Doetsch, Paul W. Share Save
APOBEC deaminases compete with tobacco smoking mutagenesis and affect age at onset of lung cancer Zhang, Tongwu; Sang, Jian; Hoang, Phuc H.; Zhao, Wei; Rosenbaum, Jennifer; Klimczak, Leszek J.; McElderry, John; Klein, Alyssa; Wirth, Christopher; Bergstrom, Erik N.; Diaz-Gay, Marcos; Vangara, Raviteja; Hutchinson, Amy; Lawrence, Scott M.; Cole, Nathan; Zhu, Bin; Przytycka, Teresa M.; Shi, Jianxin; Caporaso, Neil E.; Homer, Robert; Pesatori, Angela C.; Consonni, Dario; Chanock, Stephen J.; Wedge, David C.; Gordenin, Dmitry A.; Alexandrov, Ludmil B.; Harris, Reuben S.; Landi, Maria Teresa Share Save
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The multiple biological roles of the 3′→5′ exonuclease of Saccharomyces cerevisiae DNA polymerase δ require switching between the polymerase and exonuclease domains Jin, YH; Garg, P; Stith, CMW; Al-Refai, H; Sterling, JF; Murray, LJW; Kunkel, TA; Resnick, MA; Burgers, PM; Gordenin, DA Share Save
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Comprehensive analysis of chromothripsis in 2,658 human cancers using whole-genome sequencing (vol 52, pg 331, 2020) Cortes-Ciriano, Isidro; Lee, Jake June-Koo; Xi, Ruibin; Jain, Dhawal; Jung, Youngsook L.; Yang, Lixing; Gordenin, Dmitry; Klimczak, Leszek J.; Zhang, Cheng-Zhong; Pellman, David S.; Park, Peter J. Share Save
Genomic and evolutionary classification of lung cancer in never smokers Zhang, Tongwu; Joubert, Philippe; Ansari-Pour, Naser; Zhao, Wei; Hoang, Phuc H.; Lokanga, Rachel; Moye, Aaron L.; Rosenbaum, Jennifer; Gonzalez-Perez, Abel; Martinez-Jimenez, Francisco; Castro, Andrea; Muscarella, Lucia Anna; Hofman, Paul; Consonni, Dario; Pesatori, Angela C.; Kebede, Michael; Li, Mengying; Rothberg, Bonnie E. Gould; Peneva, Iliana; Schabath, Matthew B.; Poeta, Maria Luana; Costantini, Manuela; Hirsch, Daniela; Heselmeyer-Haddad, Kerstin; Hutchinson, Amy; Olanich, Mary; Lawrence, Scott M.; Lenz, Petra; Duggan, Maire; Bhawsar, Praphulla M. S.; Sang, Jian; Kim, Jung; Mendoza, Laura; Saini, Natalie; Klimczak, Leszek J.; Islam, S. M. Ashiqul; Otlu, Burcak; Khandekar, Azhar; Cole, Nathan; Stewart, Douglas R.; Choi, Jiyeon; Brown, Kevin M.; Caporaso, Neil E.; Wilson, Samuel H.; Pommier, Yves; Lan, Qing; Rothman, Nathaniel; Almeida, Jonas S.; Carter, Hannah; Ried, Thomas; Kim, Carla F.; Lopez-Bigas, Nuria; Garcia-Closas, Montserrat; Shi, Jianxin; Bosse, Yohan; Zhu, Bin; Gordenin, Dmitry A.; Alexandrov, Ludmil B.; Chanock, Stephen J.; Wedge, David C.; Landi, Maria Teresa Share Save
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UV-exposure, endogenous DNA damage, and DNA replication errors shape the spectra of genome changes in human skin Saini, Natalie; Giacobone, Camille K.; Klimczak, Leszek J.; Papas, Brian N.; Burkholder, Adam B.; Li, Jian-Liang; Fargo, David C.; Bai, Re; Gerrish, Kevin; Innes, Cynthia L.; Schurman, Shepherd H.; Gordenin, Dmitry A. Share Save
Tracing Lung Cancer Risk Factors Through Mutational Signatures in Never-Smokers Landi, Maria Teresa; Synnott, Naoise C.; Rosenbaum, Jennifer; Zhang, Tongwu; Zhu, Bin; Shi, Jianxin; Zhao, Wei; Kebede, Michael; Sang, Jian; Choi, Jiyeon; Mendoza, Laura; Pacheco, Marwil; Hicks, Belynda; Caporaso, Neil E.; Abubakar, Mustapha; Gordenin, Dmitry A.; Wedge, David C.; Alexandrov, Ludmil B.; Rothman, Nathaniel; Lan, Qing; Garcia-Closas, Montserrat; Chanock, Stephen J. Share Save
Somatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure Akdemir, Kadir C.; Le, Victoria T.; Kim, Justin M.; Killcoyne, Sarah; King, Devin A.; Lin, Ya-Ping; Tian, Yanyan; Inoue, Akira; Amin, Samirkumar B.; Robinson, Frederick S.; Nimmakayalu, Manjunath; Herrera, Rafael E.; Lynn, Erica J.; Chan, Kin; Seth, Sahil; Klimczak, Leszek J.; Gerstung, Moritz; Gordenin, Dmitry A.; O'Brien, John; Li, Lei; Deribe, Yonathan Lissanu; Verhaak, Roel G.; Campbell, Peter J.; Fitzgerald, Rebecca; Morrison, Ashby J.; Dixon, Jesse R.; Andrew Futreal, P. Share Save
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