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Mathieu Lupien

university health network

67H-index
449Paper Count
1.7WCitation Count
Published Papers 118
Publication Date
A chromatin-informed transcriptional regulatory framework to stratify patients and guide therapy selection in triple-negative breast cancer
err2026-08-06
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errOAAI
errShalini Bahl; Nergiz Dogan-Artun; Julia Nguyen; Hassan Mahmoud; Wail Ba-alawi; Seyed Ali Madani Tonekaboni; Komaldeep Kaur Kang; Meghan McGuire; Chantal Tobin; Jennifer Silvester; Paul Savage; Lucie Cressot; Ankita Nand; Guanqiao Feng; Paul Guilhamon; Arvind Singh Mer; Christopher Arlidge; Mitchell J. Elliott; Morag Park; David W. Cescon; Benjamin Haibe-Kains; Mathieu Lupien
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Transposable elements shape stemness in normal and leukemic hematopoiesis
err2026-05-04
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errOAAI
errGiacomo Grillo; Bettina Nadorp; Aditi Qamra; Bryce Drylie; Amanda Mitchell; Christopher Arlidge; Ankita Nand; Naoya Takayama; Alex Murison; Seyed Ali Madani Tonekaboni; Komaldeep Kaur Kang; Andrea Arruda; Jean C. Y. Wang; Mark D. Minden; Özgen Deniz; Héléna Boutzen; John E. Dick; Mathieu Lupien
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Convergent evolution of complex structural variants drives therapy resistance in metastatic prostate cancer
err2026-04-15
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errOAAI
errThaidy Moreno-Rodriguez; Meng Zhang; Arian Lundberg; Raunak Shrestha; Martin Sjöström; Anupama Pasam; Joanna Chan; Lisa Devereux; Adam Foye; Xiaolin Zhu; Alana S. Weinstein; Anna S. Trigos; Alexander W. Wyatt; Joshi J. Alumkal; Eric J. Small; Rahul Aggarwal; Scott M. Dehm; Matthew L. Bootsma; Shuang G. Zhao; Mathieu Lupien; Felix Y. Feng; Shahneen Sandhu; David A. Quigley
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A pan-cancer compendium of 1,294 plasma cell-free DNA methylomes and fragmentomes enabling multicancer detection
err2026-02-19
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errOAAI
errYong Zeng; Dor D. Abelman; Althaf Singhawansa; Nicholas Cheng; Yuanchang Fang; Sasha C. Main; Emma Bell; Wenbin Ye; Ping Luo; Samantha L. Wilson; Eric Y. Stutheit-Zhao; Derek Wong; Nadia Znassi; Kui Chen; Suluxan Mohanraj; Enrique Sanz-Garcia; Faiyaz Notta; Anand Ghanekar; Philip Awadalla; Benjamin H. Lok; Michael M. Hoffman; Raymond H. Kim; Gelareh Zadeh; Daniel D. De Carvalho; Scott V. Bratman; Mathieu Lupien; Trevor J. Pugh; Housheng Hansen He
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METTL3-based epitranscriptomic editing screening identifies functional m6A sites in cancers
err2026-02-06
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PREAI
errXin Xu; Yujuan Wang; Helen Zhu; Magnus Lam; Wenqin Luo; Mona Teng; Yin Liu; Wang Yuan Guo; Aastha Aastha; Xi Xu; Sujun Chen; Xinpei Ci; Shiyan Wang; Yong Zeng; Guanghui Zhu; Thomas Kislinger; Mathieu Lupien; Ming-Sound Tsao; Housheng Hansen He
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Clonal evolution and transcriptional plasticity shape metastatic dissemination routes in prostate cancer
err2025-12-23
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errOAAI
errMigle Mikutenaite; Evdoxia Karadoulama; Francesco Favero; Alessio Locallo; Francisco German Rodriguez Gonzalez; Daria Kiriy; Tina Keshavarzian; Kira Furlano; Markus Graefen; Robert G. Bristow; Clarissa Gerhäuser; Christoph Plass; Guido Sauter; Ronald Simon; Mathieu Lupien; Sarah Minner; Thorsten Schlomm; Joachim Weischenfeldt
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Prostate cancer cells converge to an inflammatory-like state upon metastatic dissemination
err2025-12-23
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errOAAI
errTina Keshavarzian; Kira Furlano; Giacomo Grillo; Lisanne Mout; Christopher Arlidge; Faizan Hasan; Ankita Nand; Migle Mikutenaite; Evdoxia Karadoulama; Ashish Goyal; Elisabeth L. Pezzuto; Jessica Heilmann; Jakub Sykora; Sarah Minner; Thorsten Schlomm; Guido Sauter; Ronald Simon; Housheng Hansen He; Joachim Weischenfeldt; Christoph Plass; Clarissa Gerhäuser; Mathieu Lupien
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Simulating cell-free chromatin using preclinical cancer models for liquid biopsy applications
err2025-11-22
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errOAAI
errSasha C. Main; Steven D. De Michino; Lucas Penny; Aleem Aamir; Tina Keshavarzian; Benjamin H. Lok; Robert Kridel; David W. Cescon; Michael M. Hoffman; Mathieu Lupien; Scott V. Bratman
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Epigenomics-guided precision oncology: Chromatin variants in prostate tumor evolution
err2025-01-23
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errOAAI
errFurlano, Kira; Keshavarzian, Tina; Biernath, Nadine; Fendler, Annika; de Santis, Maria; Weischenfeldt, Joachim; Lupien, Mathieu
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A chemical screen identifies PRMT5 as a therapeutic vulnerability for paclitaxel-resistant triple-negative breast cancer
err2024-11-01
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PREAI
errZhang, KeJing; Wei, Juan; Zhang, SheYu; Fei, Liyan; Guo, Lu; Liu, Xueying; Ji, YiShuai; Chen, WenJun; Ciamponi, Felipe E.; Chen, WeiChang; Li, MengXi; Zhai, Jie; Fu, Ting; Massirer, Katlin B.; Yu, Yang; Lupien, Mathieu; Wei, Yong; Arrowsmith, Cheryl. H.; Wu, Qin; Tan, WeiHong
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Epigenomic heterogeneity as a source of tumour evolution
err2024-10-16
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PREAI
errLaisne, Marthe; Lupien, Mathieu; Vallot, Celine
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Identification of leukemia stem cell subsets with distinct transcriptional, epigenetic and functional properties
errLEUKEMIA
IF13.4
err2024-08-21
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errOAAI
errBoutzen, Helena; Murison, Alex; Oriecuia, Alexa; Bansal, Suraj; Arlidge, Christopher; Wang, Jean C. Y.; Lupien, Mathieu; Kaufmann, Kerstin B.; Dick, John E.
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An atlas of accessible chromatin in advanced prostate cancer
err2024-04-05
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PREAI
errShrestha, Raunak; Chesner, Lisa N.; Zhang, Meng; Zhou, Stanley; Foye, Adam; Lundberg, Arian; Weinstein, Alana S.; Sjostrom, Martin; Zhu, Xiaolin; Moreno-Rodriguez, Thaidy; Li, Haolong; Alumkal, Joshi J.; Aggarwal, Rahul; Small, Eric J.; Lupien, Mathieu; Quigley, David A.; Feng, Felix Y.
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Detection of metabolic adaptation in a triple-negative breast cancer animal model with [18F]choline-PET imaging as a surrogate for drug resistance
err2023-12-14
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PREAI
errKohan, Andres A.; Lupien, Mathieu; Cescon, David; Deblois, Genevieve; Ventura, Manuela; Metser, Ur; Veit-Haibach, Patrick
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Chromatin insulation orchestrates matrix metalloproteinase gene cluster expression reprogramming in aggressive breast cancer tumors
err2023-11-28
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errOAAI
errLlinas-Arias, Pere; Ensenyat-Mendez, Miquel; Iniguez-Munoz, Sandra; Orozco, Javier I. J.; Valdez, Betsy; Salomon, Matthew P.; Matsuba, Chikako; Solivellas-Pieras, Maria; Bedoya-Lopez, Andres F.; Sese, Borja; Mezger, Anja; Ormestad, Mattias; Unzueta, Fernando; Strand, Siri H.; Boiko, Alexander D.; Hwang, E. Shelley; Cortes, Javier; Dinome, Maggie L.; Esteller, Manel; Lupien, Mathieu; Marzese, Diego M.
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The chromatin and single-cell transcriptional landscapes of CD4 T cells in inflammatory bowel disease link risk loci with a proinflammatory Th17 cell population
err2023-08-03
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errOAAI
errMedina, Tiago S.; Murison, Alex; Smith, Michelle; Kinker, Gabriela S.; Chakravarthy, Ankur; Vitiello, Glauco A. F.; Turpin, Williams; Shen, Shu Yi; Yau, Helen L.; Sarmento, Olga F.; Faubion, William; Lupien, Mathieu; Silverberg, Mark S.; Arrowsmith, Cheryl H.; De Carvalho, Daniel D.
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Human papillomavirus integration transforms chromatin to drive oncogenesis
err2023-06-27
err10
errOAAI
errKarimzadeh, Mehran; Arlidge, Christopher; Rostami, Ariana; Lupien, Mathieu; Bratman, Scott V.; Hoffman, Michael M.
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Chronic hypoxia favours adoption to a castration-resistant cell state in prostate cancer
err2023-04-05
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errOAAI
errCameron, Sarina; Deblois, Genevieve; Hawley, James R.; Qamra, Aditi; Zhou, Stanley; Tonekaboni, Seyed Ali Madani; Murison, Alexander; Van Vliet, Romy; Liu, Juan; Locasale, Jason W.; Lupien, Mathieu
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Coactivator Function Defines the Active Estrogen Receptor Alpha Cistrome
err2023-03-21
err80
errOAAI
errLupien, Mathieu; Eeckhoute, Jerome; Meyer, Clifford A.; Krum, Susan A.; Rhodes, Daniel R.; Liu, X. Shirley; Brown, Myles
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Genomic Collaboration of Estrogen Receptor α and Extracellular Signal-Regulated Kinase 2 in Regulating Gene and Proliferation Programs
err2023-03-20
err112
errOAAI
errMadak-Erdogan, Zeynep; Lupien, Mathieu; Stossi, Fabio; Brown, Myles; Katzenellenbogen, Benita S.
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