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Ahmet Zehir

Arizona State University

82H-index
559Paper Count
4.5WCitation Count
Published Papers 134
Publication Date
Lexicon for Clonal Hematopoiesis in Liquid Biopsy
err2025-12-26
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errTell, Robert; Zehir, Ahmet; Anfora, Andrew T.; Basu, Gargi; Beidelschies, Michelle; Compton, Carolyn; Cristiano, Stephen; Godsey, James H.; Hu, John; Johann, Donald J.; Juntilla, Marisa; Kansal, Rina; Lo, Christine; Lopez Ramos, Dorys; Mahaganapathy, Vaidhyanathan; Merriam, David; Rolfo, Christian; Russell, Hugh; Singh, Usha; Stetson, Daniel; You, Martin; Leiman, Lauren C.
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Author Correction: Feasibility of whole genome and transcriptome profiling in pediatric and young adult cancers
err2025-09-03
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errN. Shukla; M. F. Levine; G. Gundem; D. Domenico; B. Spitzer; N. Bouvier; J. E. Arango-Ossa; D. Glodzik; J. S. Medina-Martínez; U. Bhanot; J. Gutiérrez-Abril; Y. Zhou; E. Fiala; E. Stockfisch; S. Li; M. I. Rodriguez-Sanchez; T. O’Donohue; C. Cobbs; M. H. A. Roehrl; J. Benhamida; F. Iglesias Cardenas; M. Ortiz; M. Kinnaman; S. Roberts; M. Ladanyi; S. Modak; S. Farouk-Sait; E. Slotkin; M. A. Karajannis; F. Dela Cruz; J. Glade Bender; A. Zehir; A. Viale; M. F. Walsh; A. L. Kung; E. Papaemmanuil
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Germline genetic variation impacts clonal hematopoiesis landscape and progression to malignancy
err2025-07-15
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errJie Liu; Duc Tran; Liying Xue; Brian J. Wiley; Caitlyn Vlasschaert; Caroline J. Watson; Hamish A. J. MacGregor; Xiaoyu Zong; Irenaeus C. C. Chan; Indraniel Das; Md Mesbah Uddin; Abhishek Niroula; Gabriel Griffin; Benjamin L. Ebert; Taralynn Mack; Yash Pershad; Brian Sharber; Michael Berger; Ahmet Zehir; Ryan Ptashkin; Ross L. Levine; Elli Papaemmanuil; Vijai Joseph; Teng Gao; Yelena Kemel; Diana Mandelker; Konrad H. Stopsack; Paul D. P. Pharoah; Semanti Mukherjee; Li Ding; Yin Cao; Matthew J. Walter; Jamie R. Blundell; Nilanjan Chatterjee; Kenneth Offit; Lucy A. Godley; Daniel C. Link; Zsofia K. Stadler; Alexander G. Bick; Pradeep Natarajan; Kelly L. Bolton
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Clinical Bioinformatician Body of Knowledge—Bioinformatics and Software Core
err2025-05-19
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PREAI
errSabah Kadri; Kelly E. Craven; Amber M. Fussell; Elaine P.S. Gee; Danielle Jordan; Eric W. Klee; Niklas Krumm; Robyn L. Temple-Smolkin; Ahmet Zehir; Weiwei Zhang; Andrea Sboner
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Leveraging RNA from DNA Extraction Lysate to Rescue “Insufficient” Samples for More Comprehensive Genomic Profiling in Patients with Scant Tumor Specimens
err2025-05-15
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PREAI
errMark D. Ewalt; Sara E. DiNapoli; Kerry Mullaney; Alison Urvalek; Minji Kim Uh; Purvil Sukhadia; J. Keith Killian; Michael Zaidinski; Hun Jae Jung; Tiffany McFarlane; Kelly Rios-Papachristos; Alexander Drilon; Mark G. Kris; Khedoudja Nafa; Maria E. Arcila; Marc Ladanyi; Ahmet Zehir; Michael Offin; Ryma Benayed
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A Joint Consensus Recommendation of the Association for Molecular Pathology, College of American Pathologists, and Society for Immunotherapy of Cancer
err2024-08-01
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PREAI
errFurtado, Larissa v; Bifulco, Carlo; Dolderer, Daniel; Hsiao, Susan J.; Kipp, Benjamin R.; Lindeman, Neal I.; Ritterhouse, Lauren L.; Temple-Smolkin, Robyn L.; Zehir, Ahmet; Nowak, Jonathan A.
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General Applicability of Existing College of American Pathologists Accreditation Requirements to Clinical Implementation of Machine Learning-Based Methods in Molecular Oncology Testing
err2024-06-14
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errFurtado, Larissa, V; Ikemura, Kenji; Benkli, Cagla Y.; Moncur, Joel T.; Huang, Richard S. P.; Zehir, Ahmet; Stellato, Katherine; Vasalos, Patricia; Sadri, Navid; Suarez, Carlos J.
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Age-related and organ-specific host mosaicism as a driver of dormant cancer cell awakening
err2024-04-05
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PREAI
errAguirre-Ghiso, Julio A.; Papanicolaou, Michael; Vela, Pablo Sanchez; Yang, Julie; Safonov, Anton; Tao, Jacqueline; Exposito, Sebastia Franch; Tiedje, Vera; Dalla, Erica; Salazar, Luis E. Valencia; Barth, Nicole; Sahin, Merve; Chen, Kevin; Park, Jinae; Wereski, Matthew; Krishnan, Aishwarya; Benitez, Anthony Martinez; Ptashkin, Ryan; Robson, Mark E.; de Stanchina, Elisa; Braunstein, Lior Z.; Zehir, Ahmet; Comen, Elizabeth; Norton, Larry; Berger, Michael; Koche, Richard; Razavi, Pedram; Levine, Ross
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Universal germline genetic testing in patients with hematologic malignancies using DNA isolated from nail clippings
err2024-04-04
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errCeyhan-Birsoy, Ozge; Fiala, Elise; Rana, Satshil; Sheehan, Margaret; Kennedy, Jennifer; Yelskaya, Zarina; Rai, Vikas; Li, Yirong; Yang, Ciyu; Wong, Donna; Rijo, Ivelise; Casanova, Jacklyn; Somar, Joshua; Mehta, Nikita; Park, Hyeonjin; Ostafi, Silvana; Arora, Kanika; Padunan, Angelika; Ewalt, Mark D.; Aypar, Umut; Terraf, Panieh; Misyura, Maksym; Haque, Sofia; Behr, Gerald G.; Haque, Tamanna; Sulis, Maria; Geyer, Mark B.; Forlenza, Christopher; Thompson, Meghan C.; Carlo, Maria; Latham, Alicia; Liu, Ying; Zehir, Ahmet; Brannon, Rose; Berger, Michael; Diaz Jr, Luis A.; Dogan, Ahmet; Ladanyi, Marc; Petrova-Drus, Kseniya; Nafa, Khedoudja; Offit, Kenneth; Arcila, Maria; Stadler, Zsofia K.; Walsh, Michael F.; Mandelker, Diana
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Machine learning-enhanced targeted versus whole-exome sequencing as a guide to cancer care
err2024-03-22
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PREAI
errWoo, Hyung Jun; Chavan, Shweta S.; Hanrahan, Aphrothiti J.; Richards, Allison L.; Noronha, Anne Marie; Zehir, Ahmet; Drilon, Alexander; Berger, Michael F.; Solit, David B.; Donoghue, Mark T.
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Aligning tumor mutational burden (TMB) quantification across diagnostic platforms: phase II of the Friends of Cancer Research TMB Harmonization Project (vol 32, pg 1626, 2021)
err2024-01-01
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errVega, D. M.; Yee, L. M.; McShane, L. M.; Williams, P. M.; Chen, L.; Vilimas, T.; Fabrizio, D.; Funari, V.; Newberg, J.; Bruce, L. K.; Chen, S-J; Baden, J.; Barrett, J. Carl; Beer, P.; Butler, M.; Cheng, J-H; Conroy, J.; Cyanam, D.; Eyring, K.; Garcia, E.; Green, G.; Gregersen, V. R.; Hellmann, M. D.; Keefer, L. A.; Lasiter, L.; Lazar, A. J.; Li, M. -C; MacConaill, L. E.; Meier, K.; Mellert, H.; Pabla, S.; Pallavajjalla, A.; Pestano, G.; Salgado, R.; Samara, R.; Sokol, E. S.; Stafford, P.; Budczies, J.; Stenzinger, A.; Tom, W.; Valkenburg, K. C.; Wang, X. Z.; Weigman, V.; Xie, M.; Xie, Q.; Zehir, A.; Zhao, C.; Zhao, Y.; Stewart, M. D.; Allen, J.
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Enhanced clinical assessment of hematologic malignancies through routine paired tumor and normal sequencing
err2023-10-28
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errPtashkin, Ryan N.; Ewalt, Mark D.; Jayakumaran, Gowtham; Kiecka, Iwona; Bowman, Anita S.; Yao, Jinjuan; Casanova, Jacklyn; Lin, Yun-Te David; Petrova-Drus, Kseniya; Mohanty, Abhinita S.; Bacares, Ruben; Benhamida, Jamal; Rana, Satshil; Razumova, Anna; Vanderbilt, Chad; Rema, Anoop Balakrishnan; Rijo, Ivelise; Son-Garcia, Julie; de Bruijn, Ino; Zhu, Menglei; Lachhander, Sean; Wang, Wei; Haque, Mohammad S.; Seshan, Venkatraman E.; Wang, Jiajing; Liu, Ying; Nafa, Khedoudja; Borsu, Laetitia; Zhang, Yanming; Aypar, Umut; Suehnholz, Sarah P.; Chakravarty, Debyani; Park, Jae H.; Abdel-Wahab, Omar; Mato, Anthony R.; Xiao, Wenbin; Roshal, Mikhail; Yabe, Mariko; Batlevi, Connie Lee; Giralt, Sergio; Salles, Gilles; Rampal, Raajit; Tallman, Martin; Stein, Eytan M.; Younes, Anas; Levine, Ross L.; Perales, Miguel-Angel; van den Brink, Marcel R. M.; Dogan, Ahmet; Ladanyi, Marc; Berger, Michael F.; Brannon, A. Rose; Benayed, Ryma; Zehir, Ahmet; Arcila, Maria E.
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Quantifying the Expanding Landscape of Clinical Actionability for Patients with Cancer
err2023-10-17
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errSuehnholz, Sarah P.; Nissan, Moriah H.; Zhang, Hongxin; Kundra, Ritika; Nandakumar, Subhiksha; Lu, Calvin; Carrero, Stephanie; Dhaneshwar, Amanda; Fernandez, Nicole; Xu, Benjamin W.; Arcila, Maria E.; Zehir, Ahmet; Syed, Aijazuddin; Brannon, A. Rose; Rudolph, Julia E.; Paraiso, Eder; Sabbatini, Paul J.; Levine, Ross L.; Dogan, Ahmet; Gao, Jianjiong; Ladanyi, Marc; Drilon, Alexander; Berger, Michael F.; Solit, David B.; Schultz, Nikolaus; Chakravarty, Debyani
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SPOT/Dx Pilot Reanalysis and College of American Pathologists Proficiency Testing for KRAS and NRAS Demonstrate Excellent Laboratory Performance
err2023-09-30
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errZehir, Ahmet; Nardi, Valentina; Konnick, Eric Q.; Lockwood, Christina M.; Long, Thomas A.; Sidiropoulos, Nikoletta; Souers, Rhona J.; Vasalos, Patricia; Lindeman, Neal I.; Moncur, Joel T.
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In Silico Approaches to Proficiency Testing Considerations for Continued Feasibility
err2023-08-01
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PREAI
errHagemann, Ian S.; Zehir, Ahmet; Suarez, Carlos J.; V. Furtado, Larissa; Halley, Jaimie; Kane, Megan; Mot, Nicole; Vasalos, Patricia; Moncur, Joel T.; Konnick, Eric Q.
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The evolution of MRD assays: Moving beyond the tumor-Informed bespoke NGS panel
err2023-04-14
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PREAI
errLabrousse, Paul; Stetson, Daniel; Hadfield, James; Abbosh, Chris; Zehir, Ahmet; Barrett, Carl; Dougherty, Brian; Hodgson, Darren
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Impact of clonal hematopoiesis on disease progression following CDK4/6 inhibitor therapy
err2023-03-01
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PREAI
errTao, Jacqueline; Vela, Pablo Sanchez; Safonov, Anton; Ferraro, Emanuela; Exposito, Sebastia Franch; Menghrajani, Kamal; Ptashkin, Ryan; Comen, Elizabeth; Braunstein, Lior Z.; Robson, Mark E.; Chandarlapaty, Sarat; Reis-Filho, Jorge; Berger, Michael; Zehir, Ahmet; Norton, Larry; Levine, Ross; Razavi, Pedram
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Tumoral Intraductal Neoplasms of the Bile Ducts Comprise Morphologically and Genetically Distinct Entities
err2023-02-23
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errWang, Tao; Askan, Gokce; Ozcan, Kerem; Rana, Satshil; Zehir, Ahmet; Bhanot, Umeshkumar K.; Yantiss, Rhonda K.; Rao, Deepthi S.; Wahl, Samuel J.; Bagci, Pelin; Balci, Serdar; Balachandran, Vinod; Jarnagin, William R.; Adsay, N. Volkan; Klimstra, David S.; Basturk, Olca
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Overall survival with circulating tumor DNA-guided therapy in advanced non-small-cell lung cancer
err2022-11-10
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errJee, Justin; Lebow, Emily S.; Yeh, Randy; Das, Jeeban P.; Namakydoust, Azadeh; Paik, Paul K.; Chaft, Jamie E.; Jayakumaran, Gowtham; Brannon, A. Rose; Benayed, Ryma; Zehir, Ahmet; Donoghue, Mark; Schultz, Nikolaus; Chakravarty, Debyani; Kundra, Ritika; Madupuri, Ramyasree; Murciano-Goroff, Yonina R.; Tu, Hai-Yan; Xu, Chong-Rui; Martinez, Andres; Wilhelm, Clare; Galle, Jesse; Daly, Bobby; Yu, Helena A.; Offin, Michael; Hellmann, Matthew D.; Lito, Piro; Arbour, Kathryn C.; Zauderer, Marjorie G.; Kris, Mark G.; Ng, Kenneth K.; Eng, Juliana; Preeshagul, Isabel; Lai, W. Victoria; Fiore, John J.; Iqbal, Afsheen; Molena, Daniela; Rocco, Gaetano; Park, Bernard J.; Lim, Lee P.; Li, Mark; Tong-Li, Candace; De Silva, Madhawa; Chan, David L.; Diakos, Connie, I; Itchins, Malinda; Clarke, Stephen; Pavlakis, Nick; Lee, Adrian; Rekhtman, Natasha; Chang, Jason; Travis, William D.; Riely, Gregory J.; Solit, David B.; Gonen, Mithat; Rusch, Valerie W.; Rimner, Andreas; Gomez, Daniel; Drilon, Alexander; Scher, Howard, I; Shah, Sohrab P.; Berger, Michael F.; Arcila, Maria E.; Ladanyi, Marc; Levine, Ross L.; Shen, Ronglai; Razavi, Pedram; Reis-Filho, Jorge S.; Jones, David R.; Rudin, Charles M.; Isbell, James M.; Li, Bob T.
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Genetic Ancestry Correlates with Somatic Differences in a Real-World Clinical Cancer Sequencing Cohort
err2022-09-01
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errArora, Kanika; Tran, Thinh N.; Kemel, Yelena; Mehine, Miika; Liu, Ying L.; Nandakumar, Subhiksha; Smith, Shaleigh A.; Brannon, A. Rose; Ostrovnaya, Irina; Stopsack, Konrad H.; Razavi, Pedram; Safonov, Anton; Rizvi, Hira A.; Hellmann, Matthew D.; Vijai, Joseph; Reynolds, Thomas C.; Fagin, James A.; Carrot-Zhang, Jian; Offit, Kennet; Solit, David B.; Ladanyil, Marc; Schultz, Nikolaus; Zehir, Ahmet; Brown, Carol L.; Stadler, Zsofia K.; Chakravarty, Debyani; Bandlamudi, Chaitanya; Berger, Michael F.
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