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Single Cell Analysis of Pre-Treatment Peripheral Immune Composition Can Predict CAR-T Outcomes in Patients with Diffuse Large B-Cell Lymphoma Shapiro, Anna Gurevich; Winter, Eitan; Zwicky, Pascale; Zada, Mor; Shapira, Noam; Barboy, Oren; Chalan, Paulina; Sharet-Eshed, Reut; Kedmi, Merav; David, Eyal; Avivi, Irit Mazza; Weiner, Assaf; Ram, Ron; Amit, Ido Share Save
The CD8+T cell tolerance checkpoint triggers a distinct differentiation state defined by protein translation defects Van Der Byl, Willem; Nussing, Simone; Peters, Timothy J.; Ahn, Antonio; Li, Hanjie; Ledergor, Guy; David, Eyal; Koh, Andrew S.; Wagle, Mayura V.; Deguit, Christian Deo T.; de Menezes, Maria N.; Travers, Avraham; Sampurno, Shienny; Ramsbottom, Kelly M.; Li, Rui; Kallies, Axel; Beavis, Paul A.; Jungmann, Ralf; Bastings, Maartje M. C.; Belz, Gabrielle T.; Goel, Shom; Trapani, Joseph A.; Crabtree, Gerald R.; Chang, Howard Y.; Amit, Ido; Goodnow, Chris C.; Luciani, Fabio; Parish, Ian A. Share Save
Modeling T cell temporal response to cancer immunotherapy rationalizes development of combinatorial treatment protocols Barboy, Oren; Bercovich, Akhiad; Li, Hanjie; Eyal-Lubling, Yaniv; Yalin, Adam; Itai, Yuval Shapir; Abadie, Kathleen; Zada, Mor; David, Eyal; Shlomi-Loubaton, Shir; Katzenelenbogen, Yonatan; Jaitin, Diego Adhemar; Gur, Chamutal; Yofe, Ido; Feferman, Tali; Cohen, Merav; Dahan, Rony; Newell, Evan W.; Lifshitz, Aviezer; Tanay, Amos; Amit, Ido Share Save
Cholesterol 24-hydroxylase at the choroid plexus contributes to brain immune homeostasis Tsitsou-Kampeli, Afroditi; Suzzi, Stefano; Kenigsbuch, Mor; Satomi, Akisawa; Strobelt, Romano; Singer, Oded; Feldmesser, Ester; Purnapatre, Maitreyee; Colaiuta, Sarah Phoebeluc; David, Eyal; Cahalon, Liora; Hahn, Oliver; Wyss-Coray, Tony; Shaul, Yosef; Amit, Ido; Schwartz, Michal Share Save
Spatial and Temporal Mapping of Breast Cancer Lung Metastases Identify TREM2 Macrophages as Regulators of the Metastatic Boundary Yofe, Ido; Shami, Tamar; Cohen, Noam; Landsberger, Tomer; Sheban, Fadi; Stoler-Barak, Liat; Yalin, Adam; Phan, Truong San; Li, Baoguo; Monteran, Lea; Scharff, Ye'ela; Giladi, Amir; Elbaz, Miriam; David, Eyal; Gurevich-Shapiro, Anna; Gur, Chamutal; Shulman, Ziv; Erez, Neta; Amit, Ido Share Save
The transcriptional and regulatory identity of erythropoietin producing cells Kragesteen, Bjort K.; Giladi, Amir; David, Eyal; Halevi, Shahar; Geirsdottir, Laufey; Lempke, Olga M.; Li, Baoguo; Bapst, Andreas M.; Xie, Ken; Katzenelenbogen, Yonatan; Dahl, Sophie L.; Sheban, Fadi; Gurevich-Shapiro, Anna; Zada, Mor; Phan, Truong San; Avellino, Roberto; Wang, Shuang-Yin; Barboy, Oren; Shlomi-Loubaton, Shir; Winning, Sandra; Markwerth, Philipp P.; Dekalo, Snir; Keren-Shaul, Hadas; Kedmi, Merav; Sikora, Martin; Fandrey, Joachim; Korneliussen, Thorfinn S.; Prchal, Josef T.; Rosenzweig, Barak; Yutkin, Vladimir; Racimo, Fernando; Willerslev, Eske; Gur, Chamutal; Wenger, Roland H.; Amit, Ido Share Save
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Early Infiltration of Innate Immune Cells to the Liver Depletes HNF4α and Promotes Extrahepatic Carcinogenesis Goldman, Omer; Adler, Lital N.; Hajaj, Emma; Croese, Tommaso; Darzi, Naama; Galai, Sivan; Tishler, Hila; Ariav, Yarden; Lavie, Dor; Fellus-Alyagor, Liat; Oren, Roni; Kuznetsov, Yuri; David, Eyal; Jaschek, Rami; Stossel, Chani; Singer, Oded; Malitsky, Sergey; Barak, Renana; Seger, Rony; Erez, Neta; Amit, Ido; Tanay, Amos; Saada, Ann; Golan, Talia; Rubinek, Tamar; Sang Lee, Joo; Ben-Shachar, Shay; Wolf, Ido; Erez, Ayelet Share Save
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Neighbor-specific gene expression revealed from physically interacting cells during mouse embryonic development Kim, Junil; Rothova, Michaela Mrugala; Madan, Esha; Rhee, Siyeon; Weng, Guangzheng; Palma, Antonio M.; Liao, Linbu; David, Eyal; Amit, Ido; Hajkarim, Morteza Chalabi; Vudatha, Vignesh; Gutierrez-Garcia, Andres; Moreno, Eduardo; Winn, Robert; Trevino, Jose; Fisher, Paul B.; Brickman, Joshua M.; Gogna, Rajan; Won, Kyoung Jae Share Save
Anti-CTLA-4 antibodies drive myeloid activation and reprogram the tumor microenvironment through Fc.R engagement and type I interferon signaling (Oct, 10.1038/s43018-022-00447-1, 2022) Yofe, Ido; Landsberger, Tomer; Yalin, Adam; Solomon, Isabelle; Costoya, Cristobal; Demane, Dafne Franz; Shah, Mansi; David, Eyal; Borenstein, Chamutal; Barboy, Oren; Matos, Ignacio; Peggs, Karl S.; Quezada, Sergio A.; Amit, Ido Share Save
Anti-CTLA-4 antibodies drive myeloid activation and reprogram the tumor microenvironment through FcγR engagement and type I interferon signaling Yofe, Ido; Landsberger, Tomer; Yalin, Adam; Solomon, Isabelle; Costoya, Cristobal; Demane, Dafne Franz; Shah, Mansi; David, Eyal; Borenstein, Chamutal; Barboy, Oren; Matos, Ignacio; Peggs, Karl S.; Quezada, Sergio A.; Amit, Ido Share Save
Dual ontogeny of disease-associated microglia and disease inflammatory macrophages in aging and neurodegeneration Silvin, Aymeric; Uderhardt, Stefan; Piot, Cecile; Da Mesquita, Sandro; Yang, Katharine; Geirsdottir, Laufey; Mulder, Kevin; Eyal, David; Liu, Zhaoyuan; Bridlance, Cecile; Thion, Morgane Sonia; Zhang, Xiao Meng; Kong, Wan Ting; Deloger, Marc; Fontes, Vasco; Weiner, Assaf; Ee, Rachel; Dress, Regine; Hang, Jing Wen; Balachander, Akhila; Chakarov, Svetoslav; Malleret, Benoit; Dunsmore, Garett; Cexus, Olivier; Chen, Jinmiao; Garel, Sonia; Dutertre, Charles Antoine; Amit, Ido; Kipnis, Jonathan; Ginhoux, Florent Share Save
Identification of the central intermediate in the extra-embryonic to embryonic endoderm transition through single-cell transcriptomics Rothova, Michaela Mrugala; Nielsen, Alexander Valentin; Proks, Martin; Wong, Yan Fung; Riveiro, Alba Redo; Linneberg-Agerholm, Madeleine; David, Eyal; Amit, Ido; Trusina, Ala; Brickman, Joshua Mark Share Save
Physically interacting beta-delta pairs in the regenerating pancreas revealed by single-cell sequencing Yanowski, Eran; Yacovzada, Nancy S.; David, Eyal; Giladi, Amir; Jaitin, Diego; Farack, Lydia; Egozi, Adi; Ben-Zvi, Danny; Itzkovitz, Shalev; Amit, Ido; Hornstein, Eran Share Save
DestVI identifies continuums of cell types in spatial transcriptomics data Lopez, Romain; Li, Baoguo; Keren-Shaul, Hadas; Boyeau, Pierre; Kedmi, Merav; Pilzer, David; Jelinski, Adam; Yofe, Ido; David, Eyal; Wagner, Allon; Ergen, Can; Addadi, Yoseph; Golani, Ofra; Ronchese, Franca; Jordan, Michael I.; Amit, Ido; Yosef, Nir Share Save
The interaction of CD4+ helper T cells with dendritic cells shapes the tumor microenvironment and immune checkpoint blockade response Cohen, Merav; Giladi, Amir; Barboy, Oren; Hamon, Pauline; Li, Baoguo; Zada, Mor; Gurevich-Shapiro, Anna; Beccaria, Cristian Gabriel; David, Eyal; Maier, Barbara B.; Buckup, Mark; Kamer, Iris; Deczkowska, Aleksandra; Le Berichel, Jessica; Bar, Jair; Iannacone, Matteo; Tanay, Amos; Merad, Miriam; Amit, Ido Share Save
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