Not logged in Tumor break load quantitates structural variant-associated genomic instability with biological and clinical relevance across cancers Lakbir, Soufyan; de Wit, Renske; de Bruijn, Ino; Kundra, Ritika; Madupuri, Ramyasree; Gao, Jianjiong; Schultz, Nikolaus; Meijer, Gerrit A.; Heringa, Jaap; Abeln, Sanne Share Save
Genetic Ancestry-Based Differences in Biomarker-Based Eligibility for Precision Oncology Therapies Arora, Kanika; Suehnholz, Sarah P.; Zhang, Hongxin; Ostrovnaya, Irina; Kundra, Ritika; Nandakumar, Subhiksha; Nissan, Moriah H.; Brannon, A. Rose; Bandlamudi, Chaitanya; Ladanyi, Marc; Drilon, Alexander; Brown, Carol L.; Solit, David B.; Schultz, Nikolaus; Berger, Michael F. Share Save
Clinical Characteristics and Outcomes of Patients with Well-Differentiated Papillary Peritoneal Mesothelial Tumors Offin, Michael; Aguirre, Nicole; Yang, Soo Ryum; Sauter, Jennifer L.; Karagkounis, Georgios; Mohamed, Mostafa; Cercek, Andrea; Kundra, Ritika; Zhang, Yanming; Wang, Hui Mei; Morris, Marty P.; Ladanyi, Marc; Nash, Garrett M.; Zauderer, Marjorie G. Share Save
OncoKB™, MSK's precision oncology knowledge base: 2023 updates Suehnholz, Sarah P.; Nissan, Moriah; Zhang, Hongxin; Kundra, Ritika; Lu, Calvin; Dhaneshwar, Amanda; Fernandez, Nicole; Preiser, Benjamin; Arcila, Maria E.; Ladanyi, Marc; Berger, Michael F.; Syed, Aijazuddin; Brannon, A. Rose; Levine, Ross; Dogan, Ahmet; Drilon, Alexander; Solit, David B.; Schultz, Nikolaus; Chakravarty, Debyani Share Save
Systematic generation of a clinicogenomic harmonized oncologic real-world dataset (MSK-CHORD) Fong, Christopher J.; Pichotta, Karl; Thinh Tran; Waters, Michele; Fu, Tom; Pirun, Mono; Altoe, Mirella; Mastrogiacomo, Brooke; Luthra, Anisha; Ahmed, Mehnaj; Pasha, Arfath; Kohli, Armaan; Lim, Raymond; Pollard, Tom; Moore, Darin; Gross, Benjamin; Wang, Avery; Chennault, Calla; Kundra, Ritika; Madupuri, Ramyasree; de Bruijn, Ino; Lisman, Aaron; Chatila, Walid K.; Nandakumar, Subhiksha; Begum, Anika; Rose, Doori; Kehl, Kenneth L.; Schrag, Deborah; Berger, Michael; Carrot-Zhang, Jian; Razavi, Pedram; Li, Bob; Stetson, Peter; Schultz, Nikolaus; Jee, Justin Share Save
cBioPortal for Cancer Genomics Mazor, Tali; de Bruijn, Ino; AlHamad, Rima; Chennault, Calla; Dubin, Corey; Easton-Marks, Jeremy; Fu, Zhaoyuan; Gross, Benjamin; Haynes, Charles; Higgins, David M.; Hwee, Jason; Jagannathan, Prasanna K.; Kalafati, Mirella; Kalletla, Karthik; Ko, James; Kuijpers, Tim; Kumar, Sowmiyaa; Kumari, Priti; Kundra, Ritika; Lai, Bryan; Li, Xiang; Lindsay, James; Lisman, Aaron; Lu, Qi-Xuan; Madupuri, Ramyasree; Ochoa, Angelica; Ozgul, Yusuf Z.; Plantalech, Oleguer; Pon, Matthijs N.; Satravada, Baby A.; Singh, Jessica; Sumer, Selcuk Onur; van Nierop, Pim; Vleugels, Floris; Wang, Avery; Wilson, Manda; Zhang, Hongxin; Zhao, Gaofei; Dogrusoz, Ugur; Heath, Allison; Resnick, Adam; Pugh, Trevor J.; Sander, Chris; Cerami, Ethan; Gao, Jianjiong; Schultz, Nikolaus Share Save
Emerging disparities in the clinical actionability landscape for patients with inferred African ancestry Arora, Kanika; Suehnholz, Sarah P.; Zhang, Hongxin; Kundra, Ritika; Nandakumar, Subhiksha; Nissan, Moriah; Brannon, A. Rose; Bandlamudi, Chaitanya; Ladanyi, Marc; Drilon, Alexander; Solit, David B.; Schultz, Nikolaus; Berger, Michael F.; Chakravarty, Debyani Share Save
Integrative Molecular Analyses of the MD Anderson Prostate Cancer Patient-derived Xenograft (MDA PCa PDX) Series Anselmino, Nicolas; Labanca, Estefania; Shepherd, Peter D. A.; Dong, Jiabin; Yang, Jun; Song, Xiaofei; Nandakumar, Subhiksha; Kundra, Ritika; Lee, Cindy; Schultz, Nikolaus; Zhang, Jianhua; Araujo, John C.; Aparicio, Ana M.; Subudhi, Sumit K.; Corn, Paul G.; Pisters, Louis L.; Ward, John F.; Davis, John W.; Vazquez, Elba S.; Gueron, Geraldine; Logothetis, Christopher J.; Futreal, Andrew; Troncoso, Patricia; Chen, Yu; Navone, Nora M. Share Save
Clinical utility of plasma cell-free DNA in pancreatic neuroendocrine neoplasms Cowzer, Darren; Shah, Ronak H.; Chou, Joanne F.; Kundra, Ritika; Punn, Sippy; Fiedler, Laura; DeMore, April; Capanu, Marinela; Berger, Michael F.; Reidy-Lagunes, Diane; Raj, Nitya Share Save
Quantifying the Expanding Landscape of Clinical Actionability for Patients with Cancer Suehnholz, Sarah P.; Nissan, Moriah H.; Zhang, Hongxin; Kundra, Ritika; Nandakumar, Subhiksha; Lu, Calvin; Carrero, Stephanie; Dhaneshwar, Amanda; Fernandez, Nicole; Xu, Benjamin W.; Arcila, Maria E.; Zehir, Ahmet; Syed, Aijazuddin; Brannon, A. Rose; Rudolph, Julia E.; Paraiso, Eder; Sabbatini, Paul J.; Levine, Ross L.; Dogan, Ahmet; Gao, Jianjiong; Ladanyi, Marc; Drilon, Alexander; Berger, Michael F.; Solit, David B.; Schultz, Nikolaus; Chakravarty, Debyani Share Save
Analysis and Visualization of Longitudinal Genomic and Clinical Data from the AACR Project GENIE Biopharma Collaborative in cBioPortal de Bruijn, Ino; Kundra, Ritika; Mastrogiacomo, Brooke; Tran, Thinh Ngoc; Sikina, Luke; Mazor, Tali; Li, Xiang; Ochoa, Angelica; Zhao, Gaofei; Lai, Bryan; Abeshouse, Adam; Baiceanu, Diana; Ciftci, Ersin; Dogrusoz, Ugur; Dufilie, Andrew; Erkoc, Ziya; Lara, Elena Garcia; Fu, Zhaoyuan; Gross, Benjamin; Haynes, Charles; Heath, Allison; Higgins, David; Jagannathan, Prasanna; Kalletla, Karthik; Kumari, Priti; Lindsay, James; Lisman, Aaron; Leenknegt, Bas; Lukasse, Pieter; Madela, Divya; Madupuri, Ramyasree; van Nierop, Pim; Plantalech, Oleguer; Quach, Joyce; Resnick, Adam C.; Rodenburg, Sander Y. A.; Satravada, Baby A.; Schaeffer, Fedde; Sheridan, Robert; Singh, Jessica; Sirohi, Rajat; Sumer, Selcuk Onur; van Hagen, Sjoerd; Wang, Avery; Wilson, Manda; Zhang, Hongxin; Zhu, Kelsey; Rusk, Nicole; Brown, Samantha; Lavery, Jessica A.; Panageas, Katherine S.; Rudolph, Julia E.; LeNoue-Newton, Michele L.; Warner, Jeremy L.; Guo, Xindi; Hunter-Zinck, Haley; Yu, Thomas V.; Pilai, Shirin; Nichols, Chelsea; Gardos, Stuart M.; Philip, John; Kehl, Kenneth L.; Riely, Gregory J.; Schrag, Deborah; Lee, Jocelyn; Fiandalo, Michael V.; Sweeney, Shawn M.; Pugh, Trevor J.; Sander, Chris; Cerami, Ethan; Gao, Jianjiong; Schultz, Nikolaus Share Save
cBioPortal for Cancer Genomics de Bruijn, Ino; Mazor, Tali; Abeshouse, Adam; Baiceanu, Diana; Carrero, Stephanie; Lara, Elena Garcia; Gross, Benjamin; Higgins, David M.; Jagannathan, Prasanna K.; Kumari, Priti; Kundra, Ritika; Lai, Bryan; Li, Xiang; Lindsay, James; Lisman, Aaron; Madala, Divya; Madupuri, Ramyasree; Ochoa, Angelica; Ozgul, Yusuf Ziya; Plantalech, Oleguer; Rodenburg, Sander; Satravada, Baby Anusha; Sheridan, Robert; Sikina, Lucas; Singh, Jessica; Sumer, S. Onur; Sun, Yichao; van Nierop, Pim; Wang, Avery; Wilson, Manda; Zhang, Hongxin; Zhao, Gaofei; van Hagen, Sjoerd; Dogrusoz, Ugur; Heath, Allison; Resnick, Adam; Pugh, Trevor J.; Sander, Chris; Cerami, Ethan; Gao, Jianjiong; Schultz, Nikolaus Share Save
OncoKB, MSK's precision oncology knowledge base Suehnholz, Sarah P.; Nissan, Moriah; Zhang, Hongxin; Kundra, Ritika; Lu, Calvin; Dhaneshwar, Amanda; Fernandez, Nicole; Carrero, Stephanie; Arcila, Maria E.; Ladanyi, Marc; Berger, Michael F.; Syed, Aijazuddin; Brannon, Rose; Levine, Ross; Dogan, Ahmet; Rosen, Ezra; Drilon, Alexander; Solit, David B.; Schultz, Nikolaus; Chakravarty, Debyani Share Save
Overall survival with circulating tumor DNA-guided therapy in advanced non-small-cell lung cancer Jee, Justin; Lebow, Emily S.; Yeh, Randy; Das, Jeeban P.; Namakydoust, Azadeh; Paik, Paul K.; Chaft, Jamie E.; Jayakumaran, Gowtham; Brannon, A. Rose; Benayed, Ryma; Zehir, Ahmet; Donoghue, Mark; Schultz, Nikolaus; Chakravarty, Debyani; Kundra, Ritika; Madupuri, Ramyasree; Murciano-Goroff, Yonina R.; Tu, Hai-Yan; Xu, Chong-Rui; Martinez, Andres; Wilhelm, Clare; Galle, Jesse; Daly, Bobby; Yu, Helena A.; Offin, Michael; Hellmann, Matthew D.; Lito, Piro; Arbour, Kathryn C.; Zauderer, Marjorie G.; Kris, Mark G.; Ng, Kenneth K.; Eng, Juliana; Preeshagul, Isabel; Lai, W. Victoria; Fiore, John J.; Iqbal, Afsheen; Molena, Daniela; Rocco, Gaetano; Park, Bernard J.; Lim, Lee P.; Li, Mark; Tong-Li, Candace; De Silva, Madhawa; Chan, David L.; Diakos, Connie, I; Itchins, Malinda; Clarke, Stephen; Pavlakis, Nick; Lee, Adrian; Rekhtman, Natasha; Chang, Jason; Travis, William D.; Riely, Gregory J.; Solit, David B.; Gonen, Mithat; Rusch, Valerie W.; Rimner, Andreas; Gomez, Daniel; Drilon, Alexander; Scher, Howard, I; Shah, Sohrab P.; Berger, Michael F.; Arcila, Maria E.; Ladanyi, Marc; Levine, Ross L.; Shen, Ronglai; Razavi, Pedram; Reis-Filho, Jorge S.; Jones, David R.; Rudin, Charles M.; Isbell, James M.; Li, Bob T. Share Save
Genomic and transcriptomic determinants of response to neoadjuvant therapy in rectal cancer Chatila, Walid K.; Kim, Jin K.; Walch, Henry; Marco, Michael R.; Chen, Chin-Tung; Wu, Fan; Omer, Dana M.; Khalil, Danny N.; Ganesh, Karuna; Qu, Xuan; Luthra, Anisha; Choi, Seo-Hyun; Ho, Yu-Jui; Kundra, Ritika; Groves, Katharine I.; Chow, Oliver S.; Cercek, Andrea; Weiser, Martin R.; Widmar, Maria; Wei, Iris H.; Pappou, Emmanouil P.; Nash, Garrett M.; Paty, Philip B.; Shi, Qian; Vakiani, Efsevia; Duygu Selcuklu, S.; Donoghue, Mark T. A.; Solit, David B.; Berger, Michael F.; Shia, Jinru; Pelossof, Raphael; Romesser, Paul B.; Yaeger, Rona; Smith, J. Joshua; Schultz, Nikolaus; Sanchez-Vega, Francisco; Garcia-Aguilar, Julio Share Save
OncoTree: A Cancer Classification System for Precision Oncology Kundra, Ritika; Zhang, Hongxin; Sheridan, Robert; Sirintrapun, Sahussapont Joseph; Wang, Avery; Ochoa, Angelica; Wilson, Manda; Gross, Benjamin; Sun, Yichao; Madupuri, Ramyasree; Satravada, Baby A.; Reales, Dalicia; Vakiani, Efsevia; Al-Ahmadie, Hikmat A.; Dogan, Ahmet; Arcila, Maria; Zehir, Ahmet; Maron, Steven; Berger, Michael F.; Viaplana, Cristina; Janeway, Katherine; Ducar, Matthew; Sholl, Lynette; Dogan, Snjezana; Bedard, Philippe; Surrey, Lea F.; Sanchez, Iker Huerga; Syed, Aijaz; Rema, Anoop Balakrishnan; Chakravarty, Debyani; Suehnholz, Sarah; Nissan, Moriah; Iyer, Gopakumar, V; Murali, Rajmohan; Bouvier, Nancy; Soslow, Robert A.; Hyman, David; Younes, Anas; Intlekofer, Andrew; Harding, James J.; Carvajal, Richard D.; Sabbatini, Paul J.; Abou-Alfa, Ghassan K.; Morris, Luc; Janjigian, Yelena Y.; Gallagher, Meighan M.; Soumerai, Tara A.; Mellinghoff, Ingo K.; Hakimi, Abraham A.; Fury, Matthew; Huse, Jason T.; Bagrodia, Aditya; Hameed, Meera; Thomas, Stacy; Gardos, Stuart; Cerami, Ethan; Mazor, Tali; Kumari, Priti; Raman, Pichai; Shivdasani, Priyanka; MacFarland, Suzanne; Newman, Scott; Waanders, Angela; Gao, Jianjiong; Solit, David; Schultz, Nikolaus Share Save
Genetic Determinants of Outcome in Intrahepatic Cholangiocarcinoma Boerner, Thomas; Drill, Esther; Pak, Linda M.; Nguyen, Bastien; Sigel, Carlie S.; Doussot, Alexandre; Shin, Paul; Goldman, Debra A.; Gonen, Mithat; Allen, Peter J.; Balachandran, Vinod P.; Cercek, Andrea; Harding, James; Solit, David B.; Schultz, Nikolaus; Kundra, Ritika; Walch, Henry; D'Angelica, Michael, I; DeMatteo, Ronald P.; Drebin, Jeffrey; Kemeny, Nancy E.; Kingham, T. Peter; Simpson, Amber L.; Hechtman, Jaclyn F.; Vakiani, Efsevia; Lowery, Maeve A.; Ijzermans, J. N. M.; Buettner, S.; Koerkamp, B. Groot; Doukas, M.; Chandwani, Rohit; Jarnagin, William R. Share Save
Intrahepatic Cholangiocarcinoma with Lymph Node Metastasis: Treatment-Related Outcomes and the Role of Tumor Genomics in Patient Selection Jolissaint, Joshua S.; Soares, Kevin C.; Seier, Kenneth P.; Kundra, Ritika; Gonen, Mithat; Shin, Paul J.; Boerner, Thomas; Sigel, Carlie; Madupuri, Ramyasree; Vakiani, Efsevia; Cercek, Andrea; Harding, James J.; Kemeny, Nancy E.; Connell, Louise C.; Balachandran, Vinod P.; D'Angelica, Michael, I; Drebin, Jeffrey A.; Kingham, T. Peter; Wei, Alice C.; Jarnagin, William R. Share Save
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