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K

Katherine A. Hoadley

university of north carolina at chapel hill

136H-index
790Paper Count
16.6WCitation Count
Published Papers 140
Publication Date
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A compendium of next-generation patient-derived models for diverse cancers
errNature
IF48.5
err2026-08-05
err0
errOAAI
errDina ElHarouni; Mushriq Al-Jazrawe; Seongmin Choi; Merve Dede; Toshinori Hinoue; Sean A. Misek; Heeju Noh; Luca Zanella; Yuen-Yi Tseng; Hayley E. Francies; Dennis Plenker; Cindy W. Kyi; Julyann Perez-Mayoral; Megan J. Stine; Eva Tonsing-Carter; Rachana Agarwal; Jean Claude Zenklusen; James M. Clinton; Jennifer M. Shelton; Timothy R. Chu; William F. Hooper; Xavi Loinaz; Paula Keskula; Jordan Tagle; Peyton C. Kuhlers; Bahar Tercan; Sylvia F. Boj; Alessandro Vasciaveo; Lorenzo Tomassoni; James M. Crawford; Shawna Walsh; Claire Sinai; Sonam Bhatia; Priya Sridevi; Hardik Patel; Maria Antonietta Cerone; Kyle Ellrott; Calvin J. Kuo; Olivier Elemento; Semir Beyaz; Vincenzo Corbo; David L. Spector; Rameen Beroukhim; Martin L. Ferguson; Andrew D. Cherniack; Peter W. Laird; Nicolas Robine; Andrew McPherson; Katherine A. Hoadley; Mathew J. Garnett; David A. Tuveson; Andrea Califano; Paul T. Spellman; Keith L. Ligon; Daniela S. Gerhard; Louis M. Staudt; Jesse S. Boehm
errShare
errSave
Adaptive immune microenvironment associated with prolonged disease-free interval in estrogen receptor positive breast cancer
errnpj Breast Cancer
IF7.6
err2026-07-31
err0
errOAAI
errQichen Wang; Timothy Patrick Sheahan; Sarah C. Van Alsten; Alyssa Joy Cozzo; Brian C. Miller; Andrew Edward Walker; Eboneé Nicole Butler; J. S. Marron; Katherine A. Hoadley; Terry Hyslop; Melissa A. Troester
errShare
errSave
ELViS: an R package for estimating copy number levels of viral genomic segments at base-resolution
errBIOINFORMATICS
IF5.4
err2025-12-01
err0
errOAAI
errLee, Jin Young; Holt, Jeremiah R.; Zhao, Xiaobei; Hoadley, Katherine A.; Hayes, D. Neil; Choi, Hyo Young
errShare
errSave
The offonome reveals on and off states of gene expression near the detection limit of RNA-seq
errScientific Reports
IF3.9
err2025-11-28
err0
errOAAI
errWon-Young Choi; Xiaobei Zhao; Jeremiah Holt; Richa Jain; Heejoon Jo; Katherine A. Hoadley; D. Neil Hayes; Hyo Young Choi
errShare
errSave
Prognostic significance of CD8+T cell Spatial Biomarkers in ER plus and ER- breast cancer: A retrospective cohort study
errPLOS MEDICINE
IF9.9
err2025-10-15
err0
PREAI
errWalker, Andrew E.; Gao, Xiaohua; Wang, Qichen; De la Cruz, Gabriela; Li, Didong; Perou, Charles M.; Saltz, Joel; Marron, J. S.; Hoadley, Katherine A.; Troester, Melissa A.
errShare
errSave
Classification of non-TCGA cancer samples to TCGA molecular subtypes using compact feature sets
errCANCER CELL
IF44.5
err2025-02-01
err4
errOAAI
errEllrot, Kyle; Wong, Christopher K.; Yau, Christina; Castro, Mauro A. A.; Lee, Jordan A.; Karlberg, Brian J.; Grewal, Jasleen K.; Lagani, Vincenzo; Tercan, Bahar; Friedl, Verena; Hinoue, Toshinori; Uzunangelov, Vladislav; Westlake, Lindsay; Loinaz, Xavier; Felau, Ina; Wang, Peggy I.; Kemal, Anab; Caesar-Johnson, Samantha J.; Shmulevich, Ilya; Lazar, Alexander J.; Tsamardinos, Ioannis; Hoadley, Katherine A.; Robertson, A. Gordon; Knijnenburg, Theo A.; Benz, Christopher C.; Stuart, Joshua M.; Zenklusen, Jean C.; Cherniack, Andrew D.; Laird, Peter W.
errShare
errSave
DAB2IP loss in luminal a breast cancer leads to NF-κB-associated aggressive oncogenic phenotypes
errJCI INSIGHT
IF6.1
err2024-12-06
err0
errOAAI
errMukherjee, Angana; Kakati, Rasha T.; Van Alsten, Sarah; Laws, Tyler; Ebbs, Aaron L.; Hollern, Daniel P.; Spanheimer, Philip M.; Hoadley, Katherine A.; Troester, Melissa A.; Simon, Jeremy M.; Baldwin, Albert S.
errShare
errSave
Multimodal genome-wide survey of progressing and non-progressing breast ductal carcinoma in-situ
errBREAST CANCER RESEARCH
IF5.6
err2024-12-04
err0
errOAAI
errDebeljak, Marija; Cho, Soonweng; Downs, Bradley M.; Considine, Michael; Avin-McKelvey, Brittany; Wang, Yongchun; Perez, Phillip N.; Grizzle, William E.; Hoadley, Katherine A.; Lynch, Charles F.; Hernandez, Brenda Y.; van Diest, Paul J.; Cozen, Wendy; Hamilton, Ann S.; Hawes, Debra; Gabrielson, Edward; Cimino-Mathews, Ashley; Florea, Liliana D.; Cope, Leslie; Umbricht, Christopher B.
errShare
errSave
Image analysis-based identification of high risk ER-positive, HER2-negative breast cancers
errBREAST CANCER RESEARCH
IF5.6
err2024-12-04
err0
errOAAI
errLee, Dong Neuck; Li, Yao; Olsson, Linnea T.; Hamilton, Alina M.; Calhoun, Benjamin C.; Hoadley, Katherine A.; Marron, J. S.; Troester, Melissa A.
errShare
errSave
Prognostic value of residual disease (RD) biology and gene expression changes during the neoadjuvant treatment in patients with HER2-positive early breast cancer (EBC)
errANNALS OF ONCOLOGY
IF65.4
err2024-12-01
err0
PREAI
errFernandez-Martinez, A.; Tanioka, M.; Ahn, S. G.; Zagami, P.; Pascual, T.; Rediti, M.; Tang, G.; Hoadley, K. A.; Venet, D.; Rashid, N. U.; Spears, P. A.; Llombart-Cussa, A.; Di Cosimo, S.; de Azambuja, E.; Choudhury, A.; Rastogi, P.; Islam, M. N.; Swain, S. M.; Cortes, J.; Sotiriou, C.; Prat, A.; Perou, C. M.; Carey, L. A.
errShare
errSave
Expanded detection and impact of BAP1 alterations in cancer
errNAR CANCER
IF3.2
err2024-11-15
err0
errOAAI
errSturgill, Ian R.; Raab, Jesse R.; Hoadley, Katherine A.
errShare
errSave
Harmonizing heterogeneous transcriptomics datasets for machine learning-based analysis to identify spaceflown murine liver-specific changes
errNPJ MICROGRAVITY
IF4.1
err2024-06-11
err3
errOAAI
errIlangovan, Hari; Kothiyal, Prachi; Hoadley, Katherine A.; Elgart, Robin; Eley, Greg; Eslami, Parastou
errShare
errSave
Genomic Characterization of the Carolina Breast Cancer Study
errCANCER RESEARCH
IF16.6
err2024-05-02
err0
PREAI
errVan Alsten, Sarah; Butler, Ebonee; Calhoun, Benjamin; Love, Michael; Perou, Charles; Hoadley, Katherine A.; Troester, Melissa
errShare
errSave
Genomic characterization of endocrine resistance in ER+HER2+breast cancers in the POETIC Trial
errCANCER RESEARCH
IF16.6
err2024-05-02
err0
PREAI
errCheang, Maggie Chon U.; Zhu, Xixuan; Sipos, Orsolya; Alataki, Anastasia; Feldbauer, Mikayla; Lopez-Knowles, Elena; Tovey, Holly; Kilburn, Lucy; Sirven, Milana Bergamino; Patel, Dhrusti; Xiao, Hui; Maxwell, Perry; Skene, Anthony; Holcombe, Chris; Salto-Tellez, Manuel; Turner, Nicholas; Dodson, Andrew; Smith, Ian; Robertson, John; Bliss, Judith; Schuster, Gene; Salgado, Roberto; Dowsett, Mitch; Hoadley, Katherine A.
errShare
errSave
Prognostic value of residual disease (RD) biology and gene expression changes during the neoadjuvant treatment in HER2+early-breast cancer (EBC)
errCANCER RESEARCH
IF16.6
err2024-05-02
err0
PREAI
errFernandez-Martinez, Aranzazu; Tanioka, Maki; Ahn, Sung Gwe; Zagami, Paola; Pascual, Tomas; Rediti, Mattia; Tang, Gong; Hoadley, Katherine A.; Venet, David; Rashid, Naim U.; Spears, Patty; Bliss, Judith; Huober, Jens; Rastogi, Priya; Islam, Md N.; Cortes, Javier; Llombart-Cussac, Antonio; Swain, Sandra; Sotiriou, Christos; Prat, Aleix; Perou, Charles M.; Carey, Lisa
errShare
errSave
Pan-cancer genomic characterization of human papillomavirus associated tumors reveals patterns of somatic alteration that associate with virus status and anatomic site
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errHolt, Jeremiah Ray; Little, Paul; Jo, Heejoon; Zhao, Xiaobei; Choi, Hyo Young; Walter, Vonn; Wahle, Benjamin; Zevallos, Jose P.; Mazul, Angela; Hoadley, Katherine A.; Hayward, Michele; Hayes, David N.
errShare
errSave
Expanded detection of BAP1 alterations in cancer and comparison of tumor typespecific gene expression scores
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errSturgill, Ian R.; Raab, Jesse R.; Hoadley, Katherine A.
errShare
errSave
Leveraging compact feature sets for TCGA-based molecular subtype classification on new samples
errCANCER RESEARCH
IF16.6
err2024-03-22
err0
PREAI
errEllrott, Kyle; Wong, Chris K.; Yau, Christina; Castro, Mauro A.; Lee, Jordan; Karlberg, Brian; Grewal, Jasleen K.; Lagani, Vincenzo; Tercan, Bahar; Friedl, Verena; Hinoue, Toshinori; Uzunangelov, Vladislav; Westlake, Lindsay; Loinaz, Xavier; Felau, Ina; Wang, Peggy; Kemal, Anab; Caesar-Johnson, Samantha J.; Shmulevich, Ilya; Lazar, Alexander J.; Tsamardinos, Ioannis; Hoadley, Katherine A.; Robertson, Gordon A.; Knijnenburg, Theo A.; Benz, Christopher C.; Stuart, Joshua M.; Zenklusen, Jean C.; Cherniack, Andrew D.; Laird, Peter W.
errShare
errSave
Diffsig: Associating Risk Factors with Mutational Signatures
errCANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION
IF3.4
err2024-03-01
err0
errOAAI
errPark, Ji-Eun; Smith, Markia A.; Van Alsten, Sarah C.; Walens, Andrea; Wu, Di; Hoadley, Katherine A.; Troester, Melissa A.; Love, Michael I.
errShare
errSave
Early risk stratification of ER+/HER2-breast cancer patients using digital pathology and multi-task, weakly-supervised deep learning
errCANCER RESEARCH
IF16.6
err2024-02-01
err0
PREAI
errKaczmarzyk, Jakub R.; Torre-Healy, Luke A.; Moffitt, Richard A.; Gupta, Rajarsi; Hamilton, Alina M.; Kurc, Tahsin M.; Hoadley, Katherine A.; Troester, Melissa A.; Saltz, Joel H.
errShare
errSave

Research Directions

No research directions
Co-authors
Cooperation Journals
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Matthew Meyerson
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Elaine R. Mardis
H-index: 197 · Papers: 1.7K
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Charles M. Perou
H-index: 193 · Papers: 2.0K
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