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Melanoma progression and prognostic models drawn from single-cell, spatial maps of benign and malignant tumors Love, Nick R.; Williams, Claire; Killingbeck, Emily E.; Merleev, Alexander; Doost, Mohammad Saffari; Yu, Lan; McPherson, John D.; Mori, Hidetoshi; Borowsky, Alexander D.; Maverakis, Emanual; Kiuru, Maija Share Save
Oncogenic ETS fusions promote DNA damage and proinflammatory responses via pericentromeric RNAs in extracellular vesicles Ruzanov, Peter; Evdokimova, Valentina; Pachva, Manideep C.; Minkovich, Alon; Zhang, Zhenbo; Langman, Sofya; Gassmann, Hendrik; Thiel, Uwe; Orlic-Milacic, Marija; Zaidi, Syed H.; Peltekova, Vanya; Heisler, Lawrence E.; Sharma, Manju; Cox, Michael E.; McKee, Trevor D.; Zaidi, Mark; Lapouble, Eve; McPherson, John D.; Delattre, Olivier; Radvanyi, Laszlo; Burdach, Stefan E. G.; Stein, Lincoln D.; Sorensen, Poul H. Share Save
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A distinct subpopulation of leukemia initiating cells in acute precursor B lymphoblastic leukemia: quiescent phenotype and unique transcriptomic profile Lee, Alex Q.; Konishi, Hiroaki; Duong, Connie; Yoshida, Sakiko; Davis, Ryan R.; Van Dyke, Jonathan E.; Ijiri, Masami; McLaughlin, Bridget; Kim, Kyoungmi; Li, Yueju; Beckett, Laurel; Nitin, Nitin; McPherson, John D.; Tepper, Clifford G.; Satake, Noriko Share Save
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Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival Zaidi, Syed H.; Harrison, Tabitha A.; Phipps, Amanda, I; Steinfelder, Robert; Trinh, Quang M.; Qu, Conghui; Banbury, Barbara L.; Georgeson, Peter; Grasso, Catherine S.; Giannakis, Marios; Adams, Jeremy B.; Alwers, Elizabeth; Amitay, Efrat L.; Barfield, Richard T.; Berndt, Sonja, I; Borozan, Ivan; Brenner, Hermann; Brezina, Stefanie; Buchanan, Daniel D.; Cao, Yin; Chan, Andrew T.; Chang-Claude, Jenny; Connolly, Charles M.; Drew, David A.; Farris, Alton Brad, III; Figueiredo, Jane C.; French, Amy J.; Fuchs, Charles S.; Garraway, Levi A.; Gruber, Steve; Guinter, Mark A.; Hamilton, Stanley R.; Harlid, Sophia; Heisler, Lawrence E.; Hidaka, Akihisa; Hopper, John L.; Huang, Wen-Yi; Huyghe, Jeroen R.; Jenkins, Mark A.; Krzyzanowski, Paul M.; Lemire, Mathieu; Lin, Yi; Luo, Xuemei; Mardis, Elaine R.; McPherson, John D.; Miller, Jessica K.; Moreno, Victor; Mu, Xinmeng Jasmine; Nishihara, Reiko; Papadopoulos, Nickolas; Pasternack, Danielle; Quist, Michael J.; Rafikova, Adilya; Reid, Emma E. G.; Shinbrot, Eve; Shirts, Brian H.; Stein, Lincoln D.; Teney, Cherie D.; Timms, Lee; Um, Caroline Y.; Van Guelpen, Bethany; Van Tassel, Megan; Wang, Xiaolong; Wheeler, David A.; Yung, Christina K.; Hsu, Li; Ogino, Shuji; Gsur, Andrea; Newcomb, Polly A.; Gallinger, Steven; Hoffmeister, Michael; Campbell, Peter T.; Thibodeau, Stephen N.; Sun, Wei; Hudson, Thomas J.; Peters, Ulrike Share Save
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Genome-wide germline correlates of the epigenetic landscape of prostate cancer Houlahan, Kathleen E.; Shiah, Yu-Jia; Gusev, Alexander; Yuan, Jiapei; Ahmed, Musaddeque; Shetty, Anamay; Ramanand, Susmita G.; Yao, Cindy Q.; Bell, Connor; O'Connor, Edward; Huang, Vincent; Fraser, Michael; Heisler, Lawrence E.; Livingstone, Julie; Yamaguchi, Takafumi N.; Rouette, Alexandre; Foucal, Adrien; Espiritu, Shadrielle Melijah G.; Sinha, Ankit; Sam, Michelle; Timms, Lee; Johns, Jeremy; Wong, Ada; Murison, Alex; Orain, Michele; Picard, Valerie; Hovington, Helene; Bergeron, Alain; Lacombe, Louis; Lupien, Mathieu; Fradet, Yves; Tetu, Bernard; McPherson, John D.; Pasaniuc, Bogdan; Kislinger, Thomas; Chua, Melvin L. K.; Pomerantz, Mark M.; van der Kwast, Theodorus; Freedman, Matthew L.; Mani, Ram S.; He, Housheng H.; Bristow, Robert G.; Boutros, Paul C. Share Save
Comparative toxicoproteogenomics of mouse and rat liver identifies TCDD-resistance genes Prokopec, Stephenie D.; Lu, Aileen; Lee, Sandy Che-Eun S.; Yao, Cindy Q.; Sun, Ren X.; Watson, John D.; Soliymani, Rabah; de Borja, Richard; Wong, Ada; Sam, Michelle; Zuzarte, Philip; McPherson, John D.; Okey, Allan B.; Pohjanvirta, Raimo; Boutros, Paul C. Share Save
Cryptic genomic lesions in adverse-risk acute myeloid leukemia identified by integrated whole genome and transcriptome sequencing Kim, Jaeseung C.; Zuzarte, Philip C.; Murphy, Tracy; Chan-Seng-Yue, Michelle; Brown, Andrew M. K.; Krzyzanowski, Paul M.; Smith, Adam C.; Notta, Faiyaz; Minden, Mark D.; McPherson, John D. Share Save
Regional perturbation of gene transcription is associated with intrachromosomal rearrangements and gene fusion transcripts in high grade ovarian cancer Krzyzanowski, Paul M.; Sircoulomb, Fabrice; Yousif, Fouad; Normand, Josee; La Rose, Jose; Francis, Kyle E.; Suarez, Fernando; Beck, Tim; McPherson, John D.; Stein, Lincoln D.; Rottapel, Robert K. Share Save
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